RNA–Protein interactions for RNA: ENST00000541029.1

ATN1-204, Transcript of atrophin 1, humanhuman

TSL 2

Gene ATN1, Length 855 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-204ENST00000541029 ADAMTSL3P82987 1691 aa32.47■■■□□ 2.79
ATN1-204ENST00000541029 BCORL1Q5H9F3 1711 aa32.47■■■□□ 2.79
ATN1-204ENST00000541029 POGZQ7Z3K3 1410 aa32.47■■■□□ 2.79
ATN1-204ENST00000541029 ZFYVE16Q7Z3T8 1539 aa32.46■■■□□ 2.79
ATN1-204ENST00000541029 SCAPERQ9BY12 1400 aa32.45■■■□□ 2.79
ATN1-204ENST00000541029 CDC42BPAQ5VT25 1732 aa32.44■■■□□ 2.78
ATN1-204ENST00000541029 SIGLEC1Q9BZZ2 1709 aa32.43■■■□□ 2.78
ATN1-204ENST00000541029 CEP162Q5TB80 1403 aa32.43■■■□□ 2.78
ATN1-204ENST00000541029 YEATS2Q9ULM3 1422 aa32.4■■■□□ 2.78
ATN1-204ENST00000541029 EFCAB2Q5VUJ9 269 aa32.39■■■□□ 2.78
ATN1-204ENST00000541029 MADDQ8WXG6 1647 aa32.38■■■□□ 2.77
ATN1-204ENST00000541029 MAGI2Q86UL8 1455 aa32.37■■■□□ 2.77
ATN1-204ENST00000541029 ITSN2Q9NZM3 1697 aa32.34■■■□□ 2.77
ATN1-204ENST00000541029 HECW2Q9P2P5 1572 aa32.33■■■□□ 2.77
ATN1-204ENST00000541029 KDM5CP41229 1560 aa32.32■■■□□ 2.77
ATN1-204ENST00000541029 ARID4BQ4LE39 1312 aaPredicted RBP32.32■■■□□ 2.76
ATN1-204ENST00000541029 ABCC1P33527 1531 aa32.32■■■□□ 2.76
ATN1-204ENST00000541029 ZNF518AQ6AHZ1 1483 aa32.31■■■□□ 2.76
ATN1-204ENST00000541029 RIMS1Q86UR5 1692 aaKnown RBP32.3■■■□□ 2.76
ATN1-204ENST00000541029 PTPRMP28827 1452 aa32.28■■■□□ 2.76
ATN1-204ENST00000541029 ARHGEF12Q9NZN5 1544 aa32.23■■■□□ 2.75
ATN1-204ENST00000541029 SAMD9LQ8IVG5 1584 aa32.23■■■□□ 2.75
ATN1-204ENST00000541029 FER1L4A9Z1Z3 1794 aa32.22■■■□□ 2.75
ATN1-204ENST00000541029 EHBP1L1Q8N3D4 1523 aa32.21■■■□□ 2.75
ATN1-204ENST00000541029 ABCA6Q8N139 1617 aa32.21■■■□□ 2.75
ATN1-204ENST00000541029 DIP2CQ9Y2E4 1556 aa32.2■■■□□ 2.75
ATN1-204ENST00000541029 C9orf84Q5VXU9 1444 aa32.2■■■□□ 2.75
ATN1-204ENST00000541029 ATP10AO60312 1499 aa32.2■■■□□ 2.75
ATN1-204ENST00000541029 GPATCH8Q9UKJ3 1502 aaKnown RBP32.2■■■□□ 2.74
ATN1-204ENST00000541029 MTUS2Q5JR59 1369 aa32.19■■■□□ 2.74
ATN1-204ENST00000541029 AFAP1Q8N556 730 aa32.18■■■□□ 2.74
ATN1-204ENST00000541029 TRAPPC8Q9Y2L5 1435 aa32.17■■■□□ 2.74
ATN1-204ENST00000541029 LOC105371045A0A1W2PR82 267 aa32.17■■■□□ 2.74
ATN1-204ENST00000541029 SYCP2Q9BX26 1530 aa32.15■■■□□ 2.74
ATN1-204ENST00000541029 TIAM1Q13009 1591 aa32.14■■■□□ 2.74
ATN1-204ENST00000541029 KIDINS220Q9ULH0 1771 aa32.12■■■□□ 2.73
ATN1-204ENST00000541029 MLH3Q9UHC1 1453 aa32.12■■■□□ 2.73
ATN1-204ENST00000541029 REREQ9P2R6 1566 aa32.11■■■□□ 2.73
ATN1-204ENST00000541029 CCNB3Q8WWL7 1395 aa32.09■■■□□ 2.73
ATN1-204ENST00000541029 MLECQ14165 292 aa32.07■■■□□ 2.72
ATN1-204ENST00000541029 ZNF777Q9ULD5 760 aaPredicted RBP32.07■■■□□ 2.72
ATN1-204ENST00000541029 MYT1LQ9UL68 1186 aa32.06■■■□□ 2.72
ATN1-204ENST00000541029 SUPT6HQ7KZ85 1726 aaKnown RBP32.06■■■□□ 2.72
ATN1-204ENST00000541029 VPS8Q8N3P4 1428 aa32.05■■■□□ 2.72
ATN1-204ENST00000541029 PLEKHH2Q8IVE3 1493 aa32.01■■■□□ 2.71
ATN1-204ENST00000541029 CFDP1Q9UEE9 299 aaPredicted RBP32■■■□□ 2.71
ATN1-204ENST00000541029 INO80Q9ULG1 1556 aaPredicted RBP31.99■■■□□ 2.71
ATN1-204ENST00000541029 KIAA1107Q9UPP5 1409 aa31.97■■■□□ 2.71
ATN1-204ENST00000541029 NCOA2Q15596 1464 aa31.97■■■□□ 2.71
ATN1-204ENST00000541029 AGLP35573 1532 aa31.95■■■□□ 2.71
ATN1-204ENST00000541029 ATP7AQ04656 1500 aa31.95■■■□□ 2.71
ATN1-204ENST00000541029 LMTK3Q96Q04 1460 aa31.95■■■□□ 2.7
ATN1-204ENST00000541029 HNRNPMP52272 730 aaKnown RBP eCLIP31.94■■■□□ 2.7
ATN1-204ENST00000541029 PLPPR3Q6T4P5 718 aa31.94■■■□□ 2.7
ATN1-204ENST00000541029 SPAG9O60271 1321 aaKnown RBP31.89■■■□□ 2.7
ATN1-204ENST00000541029 LRRC9Q6ZRR7 1453 aa31.88■■■□□ 2.69
ATN1-204ENST00000541029 ZNF644Q9H582 1327 aaPredicted RBP31.87■■■□□ 2.69
ATN1-204ENST00000541029 PLXNC1O60486 1568 aa31.85■■■□□ 2.69
ATN1-204ENST00000541029 C3P01024 1663 aa31.85■■■□□ 2.69
ATN1-204ENST00000541029 ADGBQ8N7X0 1667 aa31.84■■■□□ 2.69
ATN1-204ENST00000541029 PREX1Q8TCU6 1659 aa31.84■■■□□ 2.69
ATN1-204ENST00000541029 MAP3K1Q13233 1512 aa31.84■■■□□ 2.69
ATN1-204ENST00000541029 CAMSAP2Q08AD1 1489 aa31.84■■■□□ 2.69
ATN1-204ENST00000541029 MBD5Q9P267 1494 aa31.84■■■□□ 2.69
ATN1-204ENST00000541029 A2MP01023 1474 aa31.77■■■□□ 2.68
ATN1-204ENST00000541029 CEBPAP49715 358 aaPredicted RBP31.75■■■□□ 2.67
ATN1-204ENST00000541029 CCDC141Q6ZP82 1450 aa31.75■■■□□ 2.67
ATN1-204ENST00000541029 MROH2AA6NES4 1674 aa31.73■■■□□ 2.67
ATN1-204ENST00000541029 ARHGEF5Q12774 1597 aa31.72■■■□□ 2.67
ATN1-204ENST00000541029 KANK4Q5T7N3 995 aaPredicted RBP31.71■■■□□ 2.67
ATN1-204ENST00000541029 CLTCQ00610 1675 aaKnown RBP31.7■■■□□ 2.67
ATN1-204ENST00000541029 HSPA2P54652 639 aa31.7■■■□□ 2.67
ATN1-204ENST00000541029 SETD1BQ9UPS6 1966 aaKnown RBP31.7■■■□□ 2.66
ATN1-204ENST00000541029 RTEL1-TNFRSF6BF6WH68 1400 aa31.68■■■□□ 2.66
ATN1-204ENST00000541029 CNTLNQ9NXG0 1405 aa31.68■■■□□ 2.66
ATN1-204ENST00000541029 ESF1Q9H501 851 aaKnown RBP31.66■■■□□ 2.66
ATN1-204ENST00000541029 MYOM3Q5VTT5 1437 aa31.63■■■□□ 2.65
ATN1-204ENST00000541029 UHRF1BP1Q6BDS2 1440 aa31.6■■■□□ 2.65
ATN1-204ENST00000541029 MAST1Q9Y2H9 1570 aa31.57■■■□□ 2.64
ATN1-204ENST00000541029 MIA2Q96PC5 1412 aa31.56■■■□□ 2.64
ATN1-204ENST00000541029 DHX29Q7Z478 1369 aaKnown RBP31.55■■■□□ 2.64
ATN1-204ENST00000541029 STRCQ7RTU9 1775 aa31.54■■■□□ 2.64
ATN1-204ENST00000541029 RSPH4AQ5TD94 716 aa31.53■■■□□ 2.64
ATN1-204ENST00000541029 CROCC2H7BZ55 1655 aa31.52■■■□□ 2.64
ATN1-204ENST00000541029 APLP2Q06481 763 aa31.52■■■□□ 2.64
ATN1-204ENST00000541029 GGT6Q6P531 493 aa31.52■■■□□ 2.64
ATN1-204ENST00000541029 PTPN23Q9H3S7 1636 aa31.5■■■□□ 2.63
ATN1-204ENST00000541029 ZMYM3Q14202 1370 aa31.5■■■□□ 2.63
ATN1-204ENST00000541029 NPATQ14207 1427 aa31.49■■■□□ 2.63
ATN1-204ENST00000541029 ILDR1Q86SU0 546 aaPredicted RBP31.49■■■□□ 2.63
ATN1-204ENST00000541029 MYO3AQ8NEV4 1616 aa31.49■■■□□ 2.63
ATN1-204ENST00000541029 ZNF142P52746 1687 aaPredicted RBP31.45■■■□□ 2.63
ATN1-204ENST00000541029 TSPY4P0CV99 314 aa31.45■■■□□ 2.63
ATN1-204ENST00000541029 TSPY10P0CW01 314 aa31.45■■■□□ 2.63
ATN1-204ENST00000541029 KDM5DQ9BY66 1539 aa31.44■■■□□ 2.62
ATN1-204ENST00000541029 FAM135AQ9P2D6 1515 aa31.42■■■□□ 2.62
ATN1-204ENST00000541029 RNF17Q9BXT8 1623 aaKnown RBP31.42■■■□□ 2.62
ATN1-204ENST00000541029 EIF2AK4Q9P2K8 1649 aaKnown RBP31.42■■■□□ 2.62
ATN1-204ENST00000541029 PTPRKQ15262 1439 aa31.41■■■□□ 2.62
ATN1-204ENST00000541029 KIF3BO15066 747 aa31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms