RNA–Protein interactions for RNA: ENST00000538966.5

PLXNB3-209, Transcript of plexin B3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PLXNB3, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB3-209ENST00000538966 GZF1Q9H116 711 aaPredicted RBP18.08■□□□□ 0.48
PLXNB3-209ENST00000538966 SMARCA2P51531 1590 aa18.08■□□□□ 0.48
PLXNB3-209ENST00000538966 PNNQ9H307 717 aaKnown RBP18.06■□□□□ 0.48
PLXNB3-209ENST00000538966 MORC1Q86VD1 984 aa18.06■□□□□ 0.48
PLXNB3-209ENST00000538966 HSPA5P11021 654 aaKnown RBP18.06■□□□□ 0.48
PLXNB3-209ENST00000538966 MCCP23508 829 aa18.06■□□□□ 0.48
PLXNB3-209ENST00000538966 EIF4G1Q04637 1599 aaKnown RBP18.06■□□□□ 0.48
PLXNB3-209ENST00000538966 SRPK2P78362 688 aaKnown RBP18.05■□□□□ 0.48
PLXNB3-209ENST00000538966 CUX2O14529 1486 aa18.04■□□□□ 0.48
PLXNB3-209ENST00000538966 FHAD1B1AJZ9 1412 aa18.03■□□□□ 0.48
PLXNB3-209ENST00000538966 CLSTN1O94985 981 aa18.03■□□□□ 0.48
PLXNB3-209ENST00000538966 MROH2BQ7Z745 1585 aa18.03■□□□□ 0.48
PLXNB3-209ENST00000538966 SLKQ9H2G2 1235 aaPredicted RBP18.03■□□□□ 0.48
PLXNB3-209ENST00000538966 FOXD1Q16676 465 aa18.02■□□□□ 0.47
PLXNB3-209ENST00000538966 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.01■□□□□ 0.47
PLXNB3-209ENST00000538966 CCNB3Q8WWL7 1395 aa18.01■□□□□ 0.47
PLXNB3-209ENST00000538966 CCDC88BA6NC98 1476 aa18.01■□□□□ 0.47
PLXNB3-209ENST00000538966 CARMIL1Q5VZK9 1371 aa18■□□□□ 0.47
PLXNB3-209ENST00000538966 CCER2I3L3R5 266 aa17.99■□□□□ 0.47
PLXNB3-209ENST00000538966 ISY1Q9ULR0 285 aaKnown RBP17.98■□□□□ 0.47
PLXNB3-209ENST00000538966 GNL2Q13823 731 aaKnown RBP17.97■□□□□ 0.47
PLXNB3-209ENST00000538966 MLECQ14165 292 aa17.97■□□□□ 0.47
PLXNB3-209ENST00000538966 STK26Q9P289 416 aa17.97■□□□□ 0.47
PLXNB3-209ENST00000538966 ITPRIPQ8IWB1 547 aa17.96■□□□□ 0.47
PLXNB3-209ENST00000538966 SOGA1O94964 1423 aa17.96■□□□□ 0.46
PLXNB3-209ENST00000538966 RTF1Q92541 710 aaKnown RBP17.95■□□□□ 0.46
PLXNB3-209ENST00000538966 RCAN3Q9UKA8 241 aa17.95■□□□□ 0.46
PLXNB3-209ENST00000538966 KTN1Q86UP2 1357 aaKnown RBP17.94■□□□□ 0.46
PLXNB3-209ENST00000538966 GBP4Q96PP9 640 aa17.93■□□□□ 0.46
PLXNB3-209ENST00000538966 KIAA1211Q6ZU35 1233 aa17.92■□□□□ 0.46
PLXNB3-209ENST00000538966 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
PLXNB3-209ENST00000538966 MFAP1P55081 439 aaKnown RBP17.92■□□□□ 0.46
PLXNB3-209ENST00000538966 ABCC8Q09428 1581 aa17.92■□□□□ 0.46
PLXNB3-209ENST00000538966 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
PLXNB3-209ENST00000538966 KANK1Q14678 1352 aa17.9■□□□□ 0.46
PLXNB3-209ENST00000538966 PDS5BQ9NTI5 1447 aa17.89■□□□□ 0.46
PLXNB3-209ENST00000538966 U2AF1L5P0DN76 240 aaPredicted RBP17.89■□□□□ 0.45
PLXNB3-209ENST00000538966 U2AF1Q01081 240 aaKnown RBP eCLIP17.89■□□□□ 0.45
PLXNB3-209ENST00000538966 SETD5Q9C0A6 1442 aa17.89■□□□□ 0.45
PLXNB3-209ENST00000538966 IPO8O15397 1037 aaKnown RBP17.89■□□□□ 0.45
PLXNB3-209ENST00000538966 PKD2Q13563 968 aa17.89■□□□□ 0.45
PLXNB3-209ENST00000538966 RWDD1Q9H446 243 aaPredicted RBP17.88■□□□□ 0.45
PLXNB3-209ENST00000538966 KIAA2012Q0VF49 1180 aa17.88■□□□□ 0.45
PLXNB3-209ENST00000538966 ZNF330Q9Y3S2 320 aaPredicted RBP17.87■□□□□ 0.45
PLXNB3-209ENST00000538966 TSHZ2Q9NRE2 1034 aa17.87■□□□□ 0.45
PLXNB3-209ENST00000538966 NOL8Q76FK4 1167 aaKnown RBP17.86■□□□□ 0.45
PLXNB3-209ENST00000538966 CFAP44Q96MT7 982 aa17.86■□□□□ 0.45
PLXNB3-209ENST00000538966 WIZO95785 1651 aa17.86■□□□□ 0.45
PLXNB3-209ENST00000538966 TCERG1O14776 1098 aaKnown RBP17.85■□□□□ 0.45
PLXNB3-209ENST00000538966 ROCK2O75116 1388 aaKnown RBP17.84■□□□□ 0.45
PLXNB3-209ENST00000538966 PAK3O75914 559 aaPredicted RBP17.84■□□□□ 0.45
PLXNB3-209ENST00000538966 HDGFL2Q7Z4V5 671 aaPredicted RBP17.84■□□□□ 0.45
PLXNB3-209ENST00000538966 CCDC146Q8IYE0 955 aa17.84■□□□□ 0.45
PLXNB3-209ENST00000538966 GOLGA6L3A6NEY3 463 aa17.84■□□□□ 0.45
PLXNB3-209ENST00000538966 GGT6Q6P531 493 aa17.84■□□□□ 0.45
PLXNB3-209ENST00000538966 HSP90B1P14625 803 aaKnown RBP17.83■□□□□ 0.45
PLXNB3-209ENST00000538966 ARHGAP35Q9NRY4 1499 aa17.83■□□□□ 0.45
PLXNB3-209ENST00000538966 KANK4Q5T7N3 995 aaPredicted RBP17.82■□□□□ 0.44
PLXNB3-209ENST00000538966 PRM3Q9NNZ6 103 aa17.82■□□□□ 0.44
PLXNB3-209ENST00000538966 PTMSP20962 102 aa17.82■□□□□ 0.44
PLXNB3-209ENST00000538966 CLUAP1Q96AJ1 413 aa17.82■□□□□ 0.44
PLXNB3-209ENST00000538966 TRIM6-TRIM34B2RNG4 842 aa17.81■□□□□ 0.44
PLXNB3-209ENST00000538966 TIMELESSQ9UNS1 1208 aa17.81■□□□□ 0.44
PLXNB3-209ENST00000538966 IPO9Q96P70 1041 aaKnown RBP17.81■□□□□ 0.44
PLXNB3-209ENST00000538966 VPS8Q8N3P4 1428 aa17.81■□□□□ 0.44
PLXNB3-209ENST00000538966 SMC4Q9NTJ3 1288 aa17.8■□□□□ 0.44
PLXNB3-209ENST00000538966 NOC3LQ8WTT2 800 aaKnown RBP17.8■□□□□ 0.44
PLXNB3-209ENST00000538966 FOXD4L5Q5VV16 416 aaPredicted RBP17.79■□□□□ 0.44
PLXNB3-209ENST00000538966 FOXD4L4Q8WXT5 416 aaPredicted RBP17.79■□□□□ 0.44
PLXNB3-209ENST00000538966 CARMIL2Q6F5E8 1435 aa17.79■□□□□ 0.44
PLXNB3-209ENST00000538966 PMFBP1Q8TBY8 1022 aa17.79■□□□□ 0.44
PLXNB3-209ENST00000538966 RALBP1Q15311 655 aa17.78■□□□□ 0.44
PLXNB3-209ENST00000538966 SYAP1Q96A49 352 aaPredicted RBP17.78■□□□□ 0.44
PLXNB3-209ENST00000538966 CHMP3Q9Y3E7 222 aa17.78■□□□□ 0.44
PLXNB3-209ENST00000538966 PDE4CQ08493 712 aa17.77■□□□□ 0.44
PLXNB3-209ENST00000538966 HDGFP51858 240 aaKnown RBP17.76■□□□□ 0.43
PLXNB3-209ENST00000538966 MPHOSPH9Q99550 1183 aa17.76■□□□□ 0.43
PLXNB3-209ENST00000538966 SLC4A10Q6U841 1118 aa17.76■□□□□ 0.43
PLXNB3-209ENST00000538966 CSB-PGBD3P0DP91 1061 aa17.75■□□□□ 0.43
PLXNB3-209ENST00000538966 RAB3GAP2Q9H2M9 1393 aa17.75■□□□□ 0.43
PLXNB3-209ENST00000538966 CREBRFQ8IUR6 639 aa17.75■□□□□ 0.43
PLXNB3-209ENST00000538966 CALD1Q05682 793 aaKnown RBP17.74■□□□□ 0.43
PLXNB3-209ENST00000538966 HTATSF1O43719 755 aaKnown RBP17.74■□□□□ 0.43
PLXNB3-209ENST00000538966 GORABQ5T7V8 394 aa17.73■□□□□ 0.43
PLXNB3-209ENST00000538966 TPM4P67936 248 aa17.73■□□□□ 0.43
PLXNB3-209ENST00000538966 FMN1Q68DA7 1419 aa17.72■□□□□ 0.43
PLXNB3-209ENST00000538966 NUTM2DQ5VT03 806 aaPredicted RBP17.72■□□□□ 0.43
PLXNB3-209ENST00000538966 STK31Q9BXU1 1019 aa17.71■□□□□ 0.43
PLXNB3-209ENST00000538966 SMARCA4P51532 1647 aa17.71■□□□□ 0.43
PLXNB3-209ENST00000538966 SLC4A3P48751 1232 aa17.71■□□□□ 0.43
PLXNB3-209ENST00000538966 CCDC9Q9Y3X0 531 aaKnown RBP17.7■□□□□ 0.42
PLXNB3-209ENST00000538966 TNNT3P45378 269 aaPredicted RBP17.7■□□□□ 0.42
PLXNB3-209ENST00000538966 TMX4Q9H1E5 349 aaPredicted RBP17.7■□□□□ 0.42
PLXNB3-209ENST00000538966 NUP155O75694 1391 aa17.7■□□□□ 0.42
PLXNB3-209ENST00000538966 CENPJQ9HC77 1338 aaPredicted RBP17.69■□□□□ 0.42
PLXNB3-209ENST00000538966 GPATCH3Q96I76 525 aa17.69■□□□□ 0.42
PLXNB3-209ENST00000538966 TDRD9Q8NDG6 1382 aaKnown RBP17.68■□□□□ 0.42
PLXNB3-209ENST00000538966 RRP7AQ9Y3A4 280 aaKnown RBP17.67■□□□□ 0.42
PLXNB3-209ENST00000538966 SPAG9O60271 1321 aaKnown RBP17.67■□□□□ 0.42
PLXNB3-209ENST00000538966 TAF7LQ5H9L4 462 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms