RNA–Protein interactions for RNA: ENST00000538260.5

ARMC8-223, Transcript of armadillo repeat containing 8, human

TSL 2 BASIC

Gene ARMC8, Length 4,728 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARMC8-223	ENST00000538260	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.67	□□□□□ -0.22
ARMC8-223	ENST00000538260	PTMS	P20962	102 aa		13.66	□□□□□ -0.22
ARMC8-223	ENST00000538260	RALBP1	Q15311	655 aa		13.66	□□□□□ -0.22
ARMC8-223	ENST00000538260	RWDD1	Q9H446	243 aa	Predicted RBP	13.66	□□□□□ -0.22
ARMC8-223	ENST00000538260	VPS8	Q8N3P4	1428 aa		13.66	□□□□□ -0.22
ARMC8-223	ENST00000538260	TAOK2	Q9UL54	1235 aa		13.65	□□□□□ -0.22
ARMC8-223	ENST00000538260	CARMIL1	Q5VZK9	1371 aa		13.65	□□□□□ -0.22
ARMC8-223	ENST00000538260	SRPK2	P78362	688 aa	Known RBP	13.64	□□□□□ -0.23
ARMC8-223	ENST00000538260	PKD2	Q13563	968 aa		13.64	□□□□□ -0.23
ARMC8-223	ENST00000538260	SLK	Q9H2G2	1235 aa	Predicted RBP	13.64	□□□□□ -0.23
ARMC8-223	ENST00000538260	IPO9	Q96P70	1041 aa	Known RBP	13.63	□□□□□ -0.23
ARMC8-223	ENST00000538260	MROH2B	Q7Z745	1585 aa		13.63	□□□□□ -0.23
ARMC8-223	ENST00000538260	KIAA2012	Q0VF49	1180 aa		13.62	□□□□□ -0.23
ARMC8-223	ENST00000538260	DRC7	Q8IY82	874 aa		13.62	□□□□□ -0.23
ARMC8-223	ENST00000538260	SOGA1	O94964	1423 aa		13.62	□□□□□ -0.23
ARMC8-223	ENST00000538260	KANK1	Q14678	1352 aa		13.62	□□□□□ -0.23
ARMC8-223	ENST00000538260	KIAA1211	Q6ZU35	1233 aa		13.61	□□□□□ -0.23
ARMC8-223	ENST00000538260	KANK4	Q5T7N3	995 aa	Predicted RBP	13.61	□□□□□ -0.23
ARMC8-223	ENST00000538260	GZF1	Q9H116	711 aa	Predicted RBP	13.6	□□□□□ -0.23
ARMC8-223	ENST00000538260	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.6	□□□□□ -0.23
ARMC8-223	ENST00000538260	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
ARMC8-223	ENST00000538260	CALD1	Q05682	793 aa	Known RBP	13.6	□□□□□ -0.23
ARMC8-223	ENST00000538260	TULP1	O00294	542 aa	Predicted RBP	13.59	□□□□□ -0.23
ARMC8-223	ENST00000538260	PDE3B	Q13370	1112 aa		13.59	□□□□□ -0.23
ARMC8-223	ENST00000538260	HDGF	P51858	240 aa	Known RBP	13.59	□□□□□ -0.23
ARMC8-223	ENST00000538260	RTF1	Q92541	710 aa	Known RBP	13.59	□□□□□ -0.23
ARMC8-223	ENST00000538260	RAB3GAP2	Q9H2M9	1393 aa		13.59	□□□□□ -0.23
ARMC8-223	ENST00000538260	GOLGA2	Q08379	1002 aa		13.59	□□□□□ -0.23
ARMC8-223	ENST00000538260	PMFBP1	Q8TBY8	1022 aa		13.59	□□□□□ -0.23
ARMC8-223	ENST00000538260	MPHOSPH9	Q99550	1183 aa		13.58	□□□□□ -0.23
ARMC8-223	ENST00000538260	APBB1	O00213	710 aa		13.57	□□□□□ -0.24
ARMC8-223	ENST00000538260	SYAP1	Q96A49	352 aa	Predicted RBP	13.57	□□□□□ -0.24
ARMC8-223	ENST00000538260	ARHGAP35	Q9NRY4	1499 aa		13.57	□□□□□ -0.24
ARMC8-223	ENST00000538260	FOXD1	Q16676	465 aa		13.57	□□□□□ -0.24
ARMC8-223	ENST00000538260	NLRP13	Q86W25	1043 aa		13.57	□□□□□ -0.24
ARMC8-223	ENST00000538260	GOLGA6L3	A6NEY3	463 aa		13.56	□□□□□ -0.24
ARMC8-223	ENST00000538260	HDGFL2	Q7Z4V5	671 aa	Predicted RBP	13.56	□□□□□ -0.24
ARMC8-223	ENST00000538260	ITPRIP	Q8IWB1	547 aa		13.56	□□□□□ -0.24
ARMC8-223	ENST00000538260	SOX12	O15370	315 aa		13.56	□□□□□ -0.24
ARMC8-223	ENST00000538260	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.56	□□□□□ -0.24
ARMC8-223	ENST00000538260	CUX2	O14529	1486 aa		13.55	□□□□□ -0.24
ARMC8-223	ENST00000538260	NPHP1	O15259	732 aa		13.55	□□□□□ -0.24
ARMC8-223	ENST00000538260	HTATSF1	O43719	755 aa	Known RBP	13.55	□□□□□ -0.24
ARMC8-223	ENST00000538260	WIZ	O95785	1651 aa		13.54	□□□□□ -0.24
ARMC8-223	ENST00000538260	CHMP4A	Q9BY43	222 aa		13.54	□□□□□ -0.24
ARMC8-223	ENST00000538260	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	13.54	□□□□□ -0.24
ARMC8-223	ENST00000538260	USP35	Q9P2H5	1018 aa		13.53	□□□□□ -0.24
ARMC8-223	ENST00000538260	ROCK2	O75116	1388 aa	Known RBP	13.53	□□□□□ -0.24
ARMC8-223	ENST00000538260	L3MBTL2	Q969R5	705 aa		13.52	□□□□□ -0.24
ARMC8-223	ENST00000538260	MFAP1	P55081	439 aa	Known RBP	13.52	□□□□□ -0.24
ARMC8-223	ENST00000538260	NUP155	O75694	1391 aa		13.52	□□□□□ -0.25
ARMC8-223	ENST00000538260	GNL2	Q13823	731 aa	Known RBP	13.51	□□□□□ -0.25
ARMC8-223	ENST00000538260	NACAD	O15069	1562 aa		13.51	□□□□□ -0.25
ARMC8-223	ENST00000538260	SMC4	Q9NTJ3	1288 aa		13.51	□□□□□ -0.25
ARMC8-223	ENST00000538260	STK26	Q9P289	416 aa		13.5	□□□□□ -0.25
ARMC8-223	ENST00000538260	HMMR	O75330	724 aa		13.49	□□□□□ -0.25
ARMC8-223	ENST00000538260	GGT6	Q6P531	493 aa		13.49	□□□□□ -0.25
ARMC8-223	ENST00000538260	FMN1	Q68DA7	1419 aa		13.49	□□□□□ -0.25
ARMC8-223	ENST00000538260	CLUAP1	Q96AJ1	413 aa		13.49	□□□□□ -0.25
ARMC8-223	ENST00000538260	CCDC88B	A6NC98	1476 aa		13.49	□□□□□ -0.25
ARMC8-223	ENST00000538260	HDAC5	Q9UQL6	1122 aa		13.48	□□□□□ -0.25
ARMC8-223	ENST00000538260	ABCC8	Q09428	1581 aa		13.48	□□□□□ -0.25
ARMC8-223	ENST00000538260	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.48	□□□□□ -0.25
ARMC8-223	ENST00000538260	STK31	Q9BXU1	1019 aa		13.48	□□□□□ -0.25
ARMC8-223	ENST00000538260	ANKRD30A	Q9BXX3	1397 aa		13.47	□□□□□ -0.25
ARMC8-223	ENST00000538260	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.46	□□□□□ -0.25
ARMC8-223	ENST00000538260	PHLDB1	Q86UU1	1377 aa		13.46	□□□□□ -0.25
ARMC8-223	ENST00000538260	CCDC34	Q96HJ3	373 aa		13.45	□□□□□ -0.26
ARMC8-223	ENST00000538260	CSPP1	Q1MSJ5	1256 aa		13.45	□□□□□ -0.26
ARMC8-223	ENST00000538260	EFCAB2	Q5VUJ9	269 aa		13.45	□□□□□ -0.26
ARMC8-223	ENST00000538260	EIF4G1	Q04637	1599 aa	Known RBP	13.44	□□□□□ -0.26
ARMC8-223	ENST00000538260	TPM4	P67936	248 aa		13.44	□□□□□ -0.26
ARMC8-223	ENST00000538260	PDE4A	P27815	886 aa		13.44	□□□□□ -0.26
ARMC8-223	ENST00000538260	TERF2IP	Q9NYB0	399 aa		13.44	□□□□□ -0.26
ARMC8-223	ENST00000538260	SPAG9	O60271	1321 aa	Known RBP	13.43	□□□□□ -0.26
ARMC8-223	ENST00000538260	TRIM6-TRIM34	B2RNG4	842 aa		13.43	□□□□□ -0.26
ARMC8-223	ENST00000538260	MLEC	Q14165	292 aa		13.43	□□□□□ -0.26
ARMC8-223	ENST00000538260	ARID3A	Q99856	593 aa		13.43	□□□□□ -0.26
ARMC8-223	ENST00000538260	ST18	O60284	1047 aa		13.43	□□□□□ -0.26
ARMC8-223	ENST00000538260	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.43	□□□□□ -0.26
ARMC8-223	ENST00000538260	EIF3A	Q14152	1382 aa	Known RBP	13.43	□□□□□ -0.26
ARMC8-223	ENST00000538260	DDX11L8	A8MPP1	907 aa		13.42	□□□□□ -0.26
ARMC8-223	ENST00000538260	FAM161A	Q3B820	660 aa		13.42	□□□□□ -0.26
ARMC8-223	ENST00000538260	GPATCH3	Q96I76	525 aa		13.41	□□□□□ -0.26
ARMC8-223	ENST00000538260	PHF14	O94880	888 aa		13.41	□□□□□ -0.26
ARMC8-223	ENST00000538260	CCDC146	Q8IYE0	955 aa		13.41	□□□□□ -0.26
ARMC8-223	ENST00000538260	LMOD3	Q0VAK6	560 aa		13.41	□□□□□ -0.26
ARMC8-223	ENST00000538260	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.41	□□□□□ -0.26
ARMC8-223	ENST00000538260	MYBBP1A	Q9BQG0	1328 aa	Known RBP	13.4	□□□□□ -0.26
ARMC8-223	ENST00000538260	CARMIL2	Q6F5E8	1435 aa		13.4	□□□□□ -0.26
ARMC8-223	ENST00000538260	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.39	□□□□□ -0.27
ARMC8-223	ENST00000538260	KIF15	Q9NS87	1388 aa		13.39	□□□□□ -0.27
ARMC8-223	ENST00000538260	GSE1	Q14687	1217 aa		13.39	□□□□□ -0.27
ARMC8-223	ENST00000538260	RSPH4A	Q5TD94	716 aa		13.39	□□□□□ -0.27
ARMC8-223	ENST00000538260	TNNT3	P45378	269 aa	Predicted RBP	13.39	□□□□□ -0.27
ARMC8-223	ENST00000538260	ISY1	Q9ULR0	285 aa	Known RBP	13.39	□□□□□ -0.27
ARMC8-223	ENST00000538260	FOXD4L1	Q9NU39	408 aa		13.39	□□□□□ -0.27
ARMC8-223	ENST00000538260	GORAB	Q5T7V8	394 aa		13.38	□□□□□ -0.27
ARMC8-223	ENST00000538260	SLC4A10	Q6U841	1118 aa		13.38	□□□□□ -0.27
ARMC8-223	ENST00000538260	KIF3A	Q9Y496	699 aa		13.38	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms