RNA–Protein interactions for RNA: ENST00000537328.5

TMEM258-204, Transcript of transmembrane protein 258, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM258, Length 575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-204ENST00000537328 KDM5BQ9UGL1 1544 aa23.96■■□□□ 1.43
TMEM258-204ENST00000537328 ACIN1Q9UKV3 1341 aaKnown RBP23.95■■□□□ 1.42
TMEM258-204ENST00000537328 ARID3CA6NKF2 412 aa23.95■■□□□ 1.42
TMEM258-204ENST00000537328 PPRC1Q5VV67 1664 aaKnown RBP23.91■■□□□ 1.42
TMEM258-204ENST00000537328 ATP10BO94823 1461 aa23.9■■□□□ 1.42
TMEM258-204ENST00000537328 MAP3K4Q9Y6R4 1608 aa23.89■■□□□ 1.42
TMEM258-204ENST00000537328 HFM1A2PYH4 1435 aa23.88■■□□□ 1.41
TMEM258-204ENST00000537328 AKNAQ7Z591 1439 aa23.85■■□□□ 1.41
TMEM258-204ENST00000537328 WDR7Q9Y4E6 1490 aa23.85■■□□□ 1.41
TMEM258-204ENST00000537328 ITSN2Q9NZM3 1697 aa23.83■■□□□ 1.41
TMEM258-204ENST00000537328 TEX14Q8IWB6 1497 aa23.82■■□□□ 1.4
TMEM258-204ENST00000537328 CFDP1Q9UEE9 299 aaPredicted RBP23.81■■□□□ 1.4
TMEM258-204ENST00000537328 KIF14Q15058 1648 aa23.81■■□□□ 1.4
TMEM258-204ENST00000537328 PTPRKQ15262 1439 aa23.79■■□□□ 1.4
TMEM258-204ENST00000537328 GPATCH8Q9UKJ3 1502 aaKnown RBP23.78■■□□□ 1.4
TMEM258-204ENST00000537328 ROCK1Q13464 1354 aa23.77■■□□□ 1.4
TMEM258-204ENST00000537328 NAIPQ13075 1403 aa23.76■■□□□ 1.39
TMEM258-204ENST00000537328 DAPK1P53355 1430 aa23.73■■□□□ 1.39
TMEM258-204ENST00000537328 TIMELESSQ9UNS1 1208 aa23.72■■□□□ 1.39
TMEM258-204ENST00000537328 DNMT1P26358 1616 aaKnown RBP23.71■■□□□ 1.39
TMEM258-204ENST00000537328 CAMSAP2Q08AD1 1489 aa23.68■■□□□ 1.38
TMEM258-204ENST00000537328 ABCC5O15440 1437 aa23.68■■□□□ 1.38
TMEM258-204ENST00000537328 GCC2Q8IWJ2 1684 aa23.67■■□□□ 1.38
TMEM258-204ENST00000537328 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
TMEM258-204ENST00000537328 ZNF316A6NFI3 1004 aaPredicted RBP23.65■■□□□ 1.38
TMEM258-204ENST00000537328 RSPH4AQ5TD94 716 aa23.64■■□□□ 1.37
TMEM258-204ENST00000537328 RRP7BPQ9NSQ0 103 aa23.64■■□□□ 1.37
TMEM258-204ENST00000537328 CD109Q6YHK3 1445 aa23.64■■□□□ 1.37
TMEM258-204ENST00000537328 ZNF644Q9H582 1327 aaPredicted RBP23.62■■□□□ 1.37
TMEM258-204ENST00000537328 KCNH8Q96L42 1107 aa23.62■■□□□ 1.37
TMEM258-204ENST00000537328 ZNF777Q9ULD5 760 aaPredicted RBP23.62■■□□□ 1.37
TMEM258-204ENST00000537328 CDC42BPAQ5VT25 1732 aa23.59■■□□□ 1.37
TMEM258-204ENST00000537328 ADGRL2O95490 1459 aa23.58■■□□□ 1.37
TMEM258-204ENST00000537328 COL17A1Q9UMD9 1497 aaPredicted RBP23.58■■□□□ 1.37
TMEM258-204ENST00000537328 SHANK2Q9UPX8 1470 aa23.57■■□□□ 1.36
TMEM258-204ENST00000537328 ANKRD30AQ9BXX3 1397 aa23.57■■□□□ 1.36
TMEM258-204ENST00000537328 ABCA9Q8IUA7 1624 aa23.56■■□□□ 1.36
TMEM258-204ENST00000537328 TSPY4P0CV99 314 aa23.56■■□□□ 1.36
TMEM258-204ENST00000537328 TSPY10P0CW01 314 aa23.56■■□□□ 1.36
TMEM258-204ENST00000537328 PLEKHH2Q8IVE3 1493 aa23.55■■□□□ 1.36
TMEM258-204ENST00000537328 ADGRL1O94910 1474 aa23.54■■□□□ 1.36
TMEM258-204ENST00000537328 ARHGEF5Q12774 1597 aa23.53■■□□□ 1.36
TMEM258-204ENST00000537328 PREX2Q70Z35 1606 aa23.53■■□□□ 1.36
TMEM258-204ENST00000537328 TRIM52Q96A61 297 aa23.53■■□□□ 1.36
TMEM258-204ENST00000537328 ADGBQ8N7X0 1667 aa23.53■■□□□ 1.36
TMEM258-204ENST00000537328 NCOA1Q15788 1441 aa23.52■■□□□ 1.36
TMEM258-204ENST00000537328 KDM4FA0A1W2PPD8 638 aa23.52■■□□□ 1.36
TMEM258-204ENST00000537328 CROCC2H7BZ55 1655 aa23.51■■□□□ 1.35
TMEM258-204ENST00000537328 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.49■■□□□ 1.351e-9■■■■■ 62
TMEM258-204ENST00000537328 KIAA1107Q9UPP5 1409 aa23.47■■□□□ 1.35
TMEM258-204ENST00000537328 ARHGAP5Q13017 1502 aa23.46■■□□□ 1.35
TMEM258-204ENST00000537328 NEUROD1Q13562 356 aa23.46■■□□□ 1.35
TMEM258-204ENST00000537328 C9orf84Q5VXU9 1444 aa23.46■■□□□ 1.35
TMEM258-204ENST00000537328 CCDC141Q6ZP82 1450 aa23.45■■□□□ 1.34
TMEM258-204ENST00000537328 PLCH2O75038 1416 aa23.45■■□□□ 1.34
TMEM258-204ENST00000537328 EFCAB2Q5VUJ9 269 aa23.45■■□□□ 1.34
TMEM258-204ENST00000537328 DIEXFQ68CQ4 756 aaKnown RBP23.44■■□□□ 1.34
TMEM258-204ENST00000537328 SIN3AQ96ST3 1273 aa23.44■■□□□ 1.34
TMEM258-204ENST00000537328 MPHOSPH9Q99550 1183 aa23.44■■□□□ 1.34
TMEM258-204ENST00000537328 ARAP3Q8WWN8 1544 aa23.43■■□□□ 1.34
TMEM258-204ENST00000537328 MBD5Q9P267 1494 aa23.43■■□□□ 1.34
TMEM258-204ENST00000537328 MYO5CQ9NQX4 1742 aa23.43■■□□□ 1.34
TMEM258-204ENST00000537328 CDC42BPBQ9Y5S2 1711 aa23.43■■□□□ 1.34
TMEM258-204ENST00000537328 TTC37Q6PGP7 1564 aa23.43■■□□□ 1.34
TMEM258-204ENST00000537328 TONSLQ96HA7 1378 aa23.41■■□□□ 1.34
TMEM258-204ENST00000537328 SAMD9LQ8IVG5 1584 aa23.41■■□□□ 1.34
TMEM258-204ENST00000537328 CFAP74Q9C0B2 1584 aa23.41■■□□□ 1.34
TMEM258-204ENST00000537328 HNRNPMP52272 730 aaKnown RBP eCLIP23.41■■□□□ 1.34
TMEM258-204ENST00000537328 NEO1Q92859 1461 aa23.4■■□□□ 1.34
TMEM258-204ENST00000537328 ANKRD50Q9ULJ7 1429 aa23.39■■□□□ 1.33
TMEM258-204ENST00000537328 MAST1Q9Y2H9 1570 aa23.36■■□□□ 1.33
TMEM258-204ENST00000537328 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
TMEM258-204ENST00000537328 SLC4A1APQ9BWU0 796 aaKnown RBP23.34■■□□□ 1.33
TMEM258-204ENST00000537328 KIF15Q9NS87 1388 aa23.32■■□□□ 1.32
TMEM258-204ENST00000537328 SYCP2Q9BX26 1530 aa23.31■■□□□ 1.32
TMEM258-204ENST00000537328 FRMPD1Q5SYB0 1578 aa23.31■■□□□ 1.32
TMEM258-204ENST00000537328 FANCAO15360 1455 aa23.27■■□□□ 1.32
TMEM258-204ENST00000537328 DENND4BO75064 1496 aaPredicted RBP23.27■■□□□ 1.32
TMEM258-204ENST00000537328 RICTORQ6R327 1708 aa23.27■■□□□ 1.32
TMEM258-204ENST00000537328 ANKRD30BQ9BXX2 1392 aa23.27■■□□□ 1.31
TMEM258-204ENST00000537328 PZPP20742 1482 aa23.24■■□□□ 1.31
TMEM258-204ENST00000537328 ABCC1P33527 1531 aa23.24■■□□□ 1.31
TMEM258-204ENST00000537328 ARHGEF40Q8TER5 1519 aa23.24■■□□□ 1.31
TMEM258-204ENST00000537328 KDM5DQ9BY66 1539 aa23.24■■□□□ 1.31
TMEM258-204ENST00000537328 PLXNC1O60486 1568 aa23.24■■□□□ 1.31
TMEM258-204ENST00000537328 RTEL1-TNFRSF6BF6WH68 1400 aa23.23■■□□□ 1.31
TMEM258-204ENST00000537328 RAPGEF3O95398 923 aa23.22■■□□□ 1.31
TMEM258-204ENST00000537328 NUP155O75694 1391 aa23.22■■□□□ 1.31
TMEM258-204ENST00000537328 HECW2Q9P2P5 1572 aa23.2■■□□□ 1.3
TMEM258-204ENST00000537328 DUOX2Q9NRD8 1548 aa23.2■■□□□ 1.3
TMEM258-204ENST00000537328 RPRD2Q5VT52 1461 aaKnown RBP23.18■■□□□ 1.3
TMEM258-204ENST00000537328 ARHGEF12Q9NZN5 1544 aa23.18■■□□□ 1.3
TMEM258-204ENST00000537328 BCORL1Q5H9F3 1711 aa23.17■■□□□ 1.3
TMEM258-204ENST00000537328 ERBINQ96RT1 1412 aa23.16■■□□□ 1.3
TMEM258-204ENST00000537328 SPAG9O60271 1321 aaKnown RBP23.16■■□□□ 1.3
TMEM258-204ENST00000537328 PKD2Q13563 968 aa23.16■■□□□ 1.3
TMEM258-204ENST00000537328 ZMYM4Q5VZL5 1548 aa23.16■■□□□ 1.3
TMEM258-204ENST00000537328 ADAMTSL3P82987 1691 aa23.16■■□□□ 1.3
TMEM258-204ENST00000537328 ZFYVE16Q7Z3T8 1539 aa23.13■■□□□ 1.29
TMEM258-204ENST00000537328 ARID4BQ4LE39 1312 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms