RNA–Protein interactions for RNA: ENST00000537194.6

SMAD3-203, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-203ENST00000537194 PCF11O94913 1555 aaKnown RBP14.66□□□□□ -0.06
SMAD3-203ENST00000537194 PLCH2O75038 1416 aa14.66□□□□□ -0.06
SMAD3-203ENST00000537194 SCAPERQ9BY12 1400 aa14.66□□□□□ -0.06
SMAD3-203ENST00000537194 MLECQ14165 292 aa14.65□□□□□ -0.06
SMAD3-203ENST00000537194 MYO5CQ9NQX4 1742 aa14.65□□□□□ -0.06
SMAD3-203ENST00000537194 CLIP1P30622 1438 aa14.65□□□□□ -0.06
SMAD3-203ENST00000537194 KIF14Q15058 1648 aa14.62□□□□□ -0.07
SMAD3-203ENST00000537194 YEATS2Q9ULM3 1422 aa14.61□□□□□ -0.07
SMAD3-203ENST00000537194 FER1L4A9Z1Z3 1794 aa14.6□□□□□ -0.07
SMAD3-203ENST00000537194 ATP10AO60312 1499 aa14.6□□□□□ -0.07
SMAD3-203ENST00000537194 LMTK3Q96Q04 1460 aa14.6□□□□□ -0.07
SMAD3-203ENST00000537194 TROQ12816 1431 aaPredicted RBP14.59□□□□□ -0.07
SMAD3-203ENST00000537194 C9orf84Q5VXU9 1444 aa14.59□□□□□ -0.07
SMAD3-203ENST00000537194 ARHGAP35Q9NRY4 1499 aa14.59□□□□□ -0.07
SMAD3-203ENST00000537194 CHIC1Q5VXU3 224 aa14.59□□□□□ -0.07
SMAD3-203ENST00000537194 ARHGAP5Q13017 1502 aa14.59□□□□□ -0.07
SMAD3-203ENST00000537194 ZNF518AQ6AHZ1 1483 aa14.58□□□□□ -0.08
SMAD3-203ENST00000537194 HSPA2P54652 639 aa14.57□□□□□ -0.08
SMAD3-203ENST00000537194 ESF1Q9H501 851 aaKnown RBP14.57□□□□□ -0.08
SMAD3-203ENST00000537194 SETD1BQ9UPS6 1966 aaKnown RBP14.56□□□□□ -0.08
SMAD3-203ENST00000537194 CCDC18Q5T9S5 1454 aa14.54□□□□□ -0.08
SMAD3-203ENST00000537194 AFAP1Q8N556 730 aa14.53□□□□□ -0.08
SMAD3-203ENST00000537194 DMRT2Q9Y5R5 561 aa14.52□□□□□ -0.09
SMAD3-203ENST00000537194 ARHGEF12Q9NZN5 1544 aa14.51□□□□□ -0.09
SMAD3-203ENST00000537194 SIGLEC1Q9BZZ2 1709 aa14.5□□□□□ -0.09
SMAD3-203ENST00000537194 CASKIN1Q8WXD9 1431 aa14.49□□□□□ -0.09
SMAD3-203ENST00000537194 PREX1Q8TCU6 1659 aa14.49□□□□□ -0.09
SMAD3-203ENST00000537194 KDM5CP41229 1560 aa14.49□□□□□ -0.09
SMAD3-203ENST00000537194 CDC42BPBQ9Y5S2 1711 aa14.48□□□□□ -0.09
SMAD3-203ENST00000537194 UHRF1BP1Q6BDS2 1440 aa14.48□□□□□ -0.09
SMAD3-203ENST00000537194 CEBPAP49715 358 aaPredicted RBP14.47□□□□□ -0.09
SMAD3-203ENST00000537194 CERKQ8TCT0 537 aa14.47□□□□□ -0.09
SMAD3-203ENST00000537194 PREX2Q70Z35 1606 aa14.47□□□□□ -0.09
SMAD3-203ENST00000537194 LRRIQ1Q96JM4 1722 aa14.46□□□□□ -0.09
SMAD3-203ENST00000537194 MLH3Q9UHC1 1453 aa14.46□□□□□ -0.09
SMAD3-203ENST00000537194 ZNF777Q9ULD5 760 aaPredicted RBP14.46□□□□□ -0.09
SMAD3-203ENST00000537194 REREQ9P2R6 1566 aa14.45□□□□□ -0.1
SMAD3-203ENST00000537194 FYCO1Q9BQS8 1478 aa14.44□□□□□ -0.1
SMAD3-203ENST00000537194 DIP2CQ9Y2E4 1556 aa14.44□□□□□ -0.1
SMAD3-203ENST00000537194 ITSN2Q9NZM3 1697 aa14.43□□□□□ -0.1
SMAD3-203ENST00000537194 ABCC1P33527 1531 aa14.43□□□□□ -0.1
SMAD3-203ENST00000537194 CNTLNQ9NXG0 1405 aa14.41□□□□□ -0.1
SMAD3-203ENST00000537194 TRAPPC8Q9Y2L5 1435 aa14.41□□□□□ -0.1
SMAD3-203ENST00000537194 AGLP35573 1532 aa14.41□□□□□ -0.1
SMAD3-203ENST00000537194 ABCA6Q8N139 1617 aa14.41□□□□□ -0.1
SMAD3-203ENST00000537194 CDC42BPAQ5VT25 1732 aa14.41□□□□□ -0.1
SMAD3-203ENST00000537194 SPAG9O60271 1321 aaKnown RBP14.41□□□□□ -0.1
SMAD3-203ENST00000537194 CFDP1Q9UEE9 299 aaPredicted RBP14.39□□□□□ -0.11
SMAD3-203ENST00000537194 PLEKHH2Q8IVE3 1493 aa14.38□□□□□ -0.11
SMAD3-203ENST00000537194 MTUS2Q5JR59 1369 aa14.38□□□□□ -0.11
SMAD3-203ENST00000537194 CCNB3Q8WWL7 1395 aa14.38□□□□□ -0.11
SMAD3-203ENST00000537194 C3P01024 1663 aa14.38□□□□□ -0.11
SMAD3-203ENST00000537194 KIDINS220Q9ULH0 1771 aa14.37□□□□□ -0.11
SMAD3-203ENST00000537194 SAMD9LQ8IVG5 1584 aa14.35□□□□□ -0.11
SMAD3-203ENST00000537194 HNRNPMP52272 730 aaKnown RBP eCLIP14.35□□□□□ -0.112e-6■■□□□ 12.5
SMAD3-203ENST00000537194 STRCQ7RTU9 1775 aa14.34□□□□□ -0.11
SMAD3-203ENST00000537194 SYCP2Q9BX26 1530 aa14.34□□□□□ -0.11
SMAD3-203ENST00000537194 GPATCH8Q9UKJ3 1502 aaKnown RBP14.34□□□□□ -0.11
SMAD3-203ENST00000537194 PTPRTO14522 1441 aa14.33□□□□□ -0.11
SMAD3-203ENST00000537194 KIAA1107Q9UPP5 1409 aa14.33□□□□□ -0.11
SMAD3-203ENST00000537194 SUPT6HQ7KZ85 1726 aaKnown RBP14.33□□□□□ -0.12
SMAD3-203ENST00000537194 MROH2AA6NES4 1674 aa14.32□□□□□ -0.12
SMAD3-203ENST00000537194 NPATQ14207 1427 aa14.32□□□□□ -0.12
SMAD3-203ENST00000537194 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
SMAD3-203ENST00000537194 PPP6R1Q9UPN7 881 aa14.31□□□□□ -0.12
SMAD3-203ENST00000537194 ZMYM3Q14202 1370 aa14.31□□□□□ -0.12
SMAD3-203ENST00000537194 GGT6Q6P531 493 aa14.3□□□□□ -0.12
SMAD3-203ENST00000537194 A2MP01023 1474 aa14.29□□□□□ -0.12
SMAD3-203ENST00000537194 NCOA1Q15788 1441 aa14.27□□□□□ -0.12
SMAD3-203ENST00000537194 ADGBQ8N7X0 1667 aa14.26□□□□□ -0.13
SMAD3-203ENST00000537194 CLTCQ00610 1675 aaKnown RBP14.26□□□□□ -0.13
SMAD3-203ENST00000537194 CAMSAP1Q5T5Y3 1602 aa14.26□□□□□ -0.13
SMAD3-203ENST00000537194 INO80Q9ULG1 1556 aaPredicted RBP14.26□□□□□ -0.13
SMAD3-203ENST00000537194 EHBP1L1Q8N3D4 1523 aa14.25□□□□□ -0.13
SMAD3-203ENST00000537194 PKD2Q13563 968 aa14.25□□□□□ -0.13
SMAD3-203ENST00000537194 RSPH4AQ5TD94 716 aa14.24□□□□□ -0.13
SMAD3-203ENST00000537194 DISP3Q9P2K9 1392 aa14.23□□□□□ -0.13
SMAD3-203ENST00000537194 IQSEC2Q5JU85 1478 aa14.23□□□□□ -0.13
SMAD3-203ENST00000537194 PLXNC1O60486 1568 aa14.22□□□□□ -0.13
SMAD3-203ENST00000537194 RTEL1-TNFRSF6BF6WH68 1400 aa14.22□□□□□ -0.13
SMAD3-203ENST00000537194 CEP162Q5TB80 1403 aa14.22□□□□□ -0.13
SMAD3-203ENST00000537194 NCKAP5LQ9HCH0 1330 aa14.21□□□□□ -0.13
SMAD3-203ENST00000537194 TIAM1Q13009 1591 aa14.21□□□□□ -0.14
SMAD3-203ENST00000537194 ZNF644Q9H582 1327 aaPredicted RBP14.2□□□□□ -0.14
SMAD3-203ENST00000537194 TSPY4P0CV99 314 aa14.2□□□□□ -0.14
SMAD3-203ENST00000537194 TSPY10P0CW01 314 aa14.2□□□□□ -0.14
SMAD3-203ENST00000537194 DHX29Q7Z478 1369 aaKnown RBP14.2□□□□□ -0.14
SMAD3-203ENST00000537194 MYO3AQ8NEV4 1616 aa14.19□□□□□ -0.14
SMAD3-203ENST00000537194 PLA2R1Q13018 1463 aa14.19□□□□□ -0.14
SMAD3-203ENST00000537194 CEP170BQ9Y4F5 1589 aaPredicted RBP14.19□□□□□ -0.14
SMAD3-203ENST00000537194 PTPRKQ15262 1439 aa14.19□□□□□ -0.14
SMAD3-203ENST00000537194 KIF3BO15066 747 aa14.19□□□□□ -0.14
SMAD3-203ENST00000537194 ZNF142P52746 1687 aaPredicted RBP14.19□□□□□ -0.14
SMAD3-203ENST00000537194 LTBP4Q8N2S1 1624 aa14.18□□□□□ -0.14
SMAD3-203ENST00000537194 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
SMAD3-203ENST00000537194 CCDC141Q6ZP82 1450 aa14.17□□□□□ -0.14
SMAD3-203ENST00000537194 MBD5Q9P267 1494 aa14.17□□□□□ -0.14
SMAD3-203ENST00000537194 UBAP1LF5GYI3 381 aa14.16□□□□□ -0.14
SMAD3-203ENST00000537194 ZNF335Q9H4Z2 1342 aaPredicted RBP14.15□□□□□ -0.14
SMAD3-203ENST00000537194 A2ML1A8K2U0 1454 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms