RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 HECW1Q76N89 1606 aa28.83■■■□□ 2.21
CCDC61-201ENST00000536603 ZMYM4Q5VZL5 1548 aa28.83■■■□□ 2.21
CCDC61-201ENST00000536603 LMTK3Q96Q04 1460 aa28.82■■■□□ 2.2
CCDC61-201ENST00000536603 YEATS2Q9ULM3 1422 aa28.8■■■□□ 2.2
CCDC61-201ENST00000536603 MLECQ14165 292 aa28.8■■■□□ 2.2
CCDC61-201ENST00000536603 CASKIN1Q8WXD9 1431 aa28.78■■■□□ 2.2
CCDC61-201ENST00000536603 SCAPERQ9BY12 1400 aa28.78■■■□□ 2.2
CCDC61-201ENST00000536603 MAGI2Q86UL8 1455 aa28.78■■■□□ 2.2
CCDC61-201ENST00000536603 PLCH2O75038 1416 aa28.77■■■□□ 2.2
CCDC61-201ENST00000536603 CDK11AQ9UQ88 783 aaPredicted RBP28.76■■■□□ 2.19
CCDC61-201ENST00000536603 SIGLEC1Q9BZZ2 1709 aa28.74■■■□□ 2.19
CCDC61-201ENST00000536603 MYO5CQ9NQX4 1742 aa28.74■■■□□ 2.19
CCDC61-201ENST00000536603 HSPA2P54652 639 aa28.73■■■□□ 2.19
CCDC61-201ENST00000536603 EFCAB2Q5VUJ9 269 aa28.72■■■□□ 2.19
CCDC61-201ENST00000536603 FER1L4A9Z1Z3 1794 aa28.72■■■□□ 2.19
CCDC61-201ENST00000536603 LRRIQ1Q96JM4 1722 aa28.69■■■□□ 2.18
CCDC61-201ENST00000536603 FYCO1Q9BQS8 1478 aa28.68■■■□□ 2.18
CCDC61-201ENST00000536603 MYT1LQ9UL68 1186 aa28.66■■■□□ 2.18
CCDC61-201ENST00000536603 KIF14Q15058 1648 aa28.65■■■□□ 2.18
CCDC61-201ENST00000536603 ATP10AO60312 1499 aa28.65■■■□□ 2.18
CCDC61-201ENST00000536603 CCDC18Q5T9S5 1454 aa28.64■■■□□ 2.17
CCDC61-201ENST00000536603 C9orf84Q5VXU9 1444 aa28.62■■■□□ 2.17
CCDC61-201ENST00000536603 ARHGAP5Q13017 1502 aa28.62■■■□□ 2.17
CCDC61-201ENST00000536603 TROQ12816 1431 aaPredicted RBP28.59■■■□□ 2.17
CCDC61-201ENST00000536603 ZNF518AQ6AHZ1 1483 aa28.59■■■□□ 2.17
CCDC61-201ENST00000536603 ARHGEF12Q9NZN5 1544 aa28.56■■■□□ 2.16
CCDC61-201ENST00000536603 AFAP1Q8N556 730 aa28.55■■■□□ 2.16
CCDC61-201ENST00000536603 PREX1Q8TCU6 1659 aa28.52■■■□□ 2.16
CCDC61-201ENST00000536603 CEBPAP49715 358 aaPredicted RBP28.52■■■□□ 2.16
CCDC61-201ENST00000536603 VPS8Q8N3P4 1428 aa28.49■■■□□ 2.15
CCDC61-201ENST00000536603 KDM5CP41229 1560 aa28.49■■■□□ 2.15
CCDC61-201ENST00000536603 CDC42BPBQ9Y5S2 1711 aa28.49■■■□□ 2.15
CCDC61-201ENST00000536603 CERKQ8TCT0 537 aa28.47■■■□□ 2.15
CCDC61-201ENST00000536603 DIP2CQ9Y2E4 1556 aa28.44■■■□□ 2.14
CCDC61-201ENST00000536603 ESF1Q9H501 851 aaKnown RBP28.43■■■□□ 2.14
CCDC61-201ENST00000536603 PREX2Q70Z35 1606 aa28.42■■■□□ 2.14
CCDC61-201ENST00000536603 ABCA6Q8N139 1617 aa28.4■■■□□ 2.14
CCDC61-201ENST00000536603 MTUS2Q5JR59 1369 aa28.4■■■□□ 2.14
CCDC61-201ENST00000536603 UHRF1BP1Q6BDS2 1440 aa28.39■■■□□ 2.14
CCDC61-201ENST00000536603 MLH3Q9UHC1 1453 aa28.38■■■□□ 2.13
CCDC61-201ENST00000536603 REREQ9P2R6 1566 aa28.37■■■□□ 2.13
CCDC61-201ENST00000536603 DMRT2Q9Y5R5 561 aa28.37■■■□□ 2.13
CCDC61-201ENST00000536603 ITSN2Q9NZM3 1697 aa28.37■■■□□ 2.13
CCDC61-201ENST00000536603 ABCC1P33527 1531 aa28.37■■■□□ 2.13
CCDC61-201ENST00000536603 TRAPPC8Q9Y2L5 1435 aa28.36■■■□□ 2.13
CCDC61-201ENST00000536603 SETD1BQ9UPS6 1966 aaKnown RBP28.34■■■□□ 2.13
CCDC61-201ENST00000536603 CDC42BPAQ5VT25 1732 aa28.33■■■□□ 2.13
CCDC61-201ENST00000536603 ZNF777Q9ULD5 760 aaPredicted RBP28.33■■■□□ 2.13
CCDC61-201ENST00000536603 C3P01024 1663 aa28.32■■■□□ 2.12
CCDC61-201ENST00000536603 STRCQ7RTU9 1775 aa28.32■■■□□ 2.12
CCDC61-201ENST00000536603 TIAM1Q13009 1591 aa28.29■■■□□ 2.12
CCDC61-201ENST00000536603 AGLP35573 1532 aa28.29■■■□□ 2.12
CCDC61-201ENST00000536603 EHBP1L1Q8N3D4 1523 aa28.28■■■□□ 2.12
CCDC61-201ENST00000536603 KIDINS220Q9ULH0 1771 aa28.28■■■□□ 2.12
CCDC61-201ENST00000536603 APLP2Q06481 763 aa28.24■■■□□ 2.11
CCDC61-201ENST00000536603 CCNB3Q8WWL7 1395 aa28.24■■■□□ 2.11
CCDC61-201ENST00000536603 GPATCH8Q9UKJ3 1502 aaKnown RBP28.23■■■□□ 2.11
CCDC61-201ENST00000536603 KANK4Q5T7N3 995 aaPredicted RBP28.22■■■□□ 2.11
CCDC61-201ENST00000536603 CNTLNQ9NXG0 1405 aa28.21■■■□□ 2.11
CCDC61-201ENST00000536603 MAP3K1Q13233 1512 aa28.21■■■□□ 2.11
CCDC61-201ENST00000536603 LRRC9Q6ZRR7 1453 aa28.21■■■□□ 2.11
CCDC61-201ENST00000536603 SAMD9LQ8IVG5 1584 aa28.2■■■□□ 2.11
CCDC61-201ENST00000536603 SPAG9O60271 1321 aaKnown RBP28.19■■■□□ 2.1
CCDC61-201ENST00000536603 SYCP2Q9BX26 1530 aa28.19■■■□□ 2.1
CCDC61-201ENST00000536603 HNRNPMP52272 730 aaKnown RBP eCLIP28.19■■■□□ 2.1
CCDC61-201ENST00000536603 CFDP1Q9UEE9 299 aaPredicted RBP28.19■■■□□ 2.1
CCDC61-201ENST00000536603 SUPT6HQ7KZ85 1726 aaKnown RBP28.18■■■□□ 2.1
CCDC61-201ENST00000536603 PTPRTO14522 1441 aa28.16■■■□□ 2.1
CCDC61-201ENST00000536603 NCOA2Q15596 1464 aa28.15■■■□□ 2.1
CCDC61-201ENST00000536603 MROH2AA6NES4 1674 aa28.12■■■□□ 2.09
CCDC61-201ENST00000536603 ATP7AQ04656 1500 aa28.11■■■□□ 2.09
CCDC61-201ENST00000536603 PLEKHH2Q8IVE3 1493 aa28.09■■■□□ 2.09
CCDC61-201ENST00000536603 ZMYM3Q14202 1370 aa28.09■■■□□ 2.09
CCDC61-201ENST00000536603 NPATQ14207 1427 aa28.07■■■□□ 2.08
CCDC61-201ENST00000536603 CLTCQ00610 1675 aaKnown RBP28.07■■■□□ 2.08
CCDC61-201ENST00000536603 NCOA1Q15788 1441 aa28.06■■■□□ 2.08
CCDC61-201ENST00000536603 KIAA1107Q9UPP5 1409 aa28.06■■■□□ 2.08
CCDC61-201ENST00000536603 CAMSAP1Q5T5Y3 1602 aa28.05■■■□□ 2.08
CCDC61-201ENST00000536603 ZNF644Q9H582 1327 aaPredicted RBP28.05■■■□□ 2.08
CCDC61-201ENST00000536603 INO80Q9ULG1 1556 aaPredicted RBP28.04■■■□□ 2.08
CCDC61-201ENST00000536603 A2MP01023 1474 aa28.04■■■□□ 2.08
CCDC61-201ENST00000536603 DISP3Q9P2K9 1392 aa28.04■■■□□ 2.08
CCDC61-201ENST00000536603 GGT6Q6P531 493 aa28.04■■■□□ 2.08
CCDC61-201ENST00000536603 LTBP4Q8N2S1 1624 aa28■■■□□ 2.07
CCDC61-201ENST00000536603 PLXNC1O60486 1568 aa27.99■■■□□ 2.07
CCDC61-201ENST00000536603 NCKAP5LQ9HCH0 1330 aa27.98■■■□□ 2.07
CCDC61-201ENST00000536603 ADGBQ8N7X0 1667 aa27.97■■■□□ 2.07
CCDC61-201ENST00000536603 MYO3AQ8NEV4 1616 aa27.96■■■□□ 2.07
CCDC61-201ENST00000536603 IQSEC2Q5JU85 1478 aa27.93■■■□□ 2.06
CCDC61-201ENST00000536603 MYOM3Q5VTT5 1437 aa27.92■■■□□ 2.06
CCDC61-201ENST00000536603 ZNF142P52746 1687 aaPredicted RBP27.92■■■□□ 2.06
CCDC61-201ENST00000536603 PTPRKQ15262 1439 aa27.92■■■□□ 2.06
CCDC61-201ENST00000536603 CAMSAP2Q08AD1 1489 aa27.91■■■□□ 2.06
CCDC61-201ENST00000536603 CEP170BQ9Y4F5 1589 aaPredicted RBP27.9■■■□□ 2.06
CCDC61-201ENST00000536603 MBD5Q9P267 1494 aa27.9■■■□□ 2.06
CCDC61-201ENST00000536603 PPP6R1Q9UPN7 881 aa27.9■■■□□ 2.06
CCDC61-201ENST00000536603 PKD2Q13563 968 aa27.89■■■□□ 2.06
CCDC61-201ENST00000536603 ZNF335Q9H4Z2 1342 aaPredicted RBP27.88■■■□□ 2.05
CCDC61-201ENST00000536603 MIA2Q96PC5 1412 aa27.87■■■□□ 2.05
CCDC61-201ENST00000536603 ILDR2Q71H61 639 aa27.87■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms