RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 KIF14Q15058 1648 aa17.67■□□□□ 0.42
CHRNB1-202ENST00000536404 EFCAB2Q5VUJ9 269 aa17.66■□□□□ 0.42
CHRNB1-202ENST00000536404 ARHGEF40Q8TER5 1519 aa17.66■□□□□ 0.42
CHRNB1-202ENST00000536404 PTPRMP28827 1452 aa17.65■□□□□ 0.42
CHRNB1-202ENST00000536404 BCORL1Q5H9F3 1711 aa17.65■□□□□ 0.42
CHRNB1-202ENST00000536404 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
CHRNB1-202ENST00000536404 CASKIN1Q8WXD9 1431 aa17.64■□□□□ 0.41
CHRNB1-202ENST00000536404 ZMYM4Q5VZL5 1548 aa17.63■□□□□ 0.41
CHRNB1-202ENST00000536404 MYO5CQ9NQX4 1742 aa17.63■□□□□ 0.41
CHRNB1-202ENST00000536404 CLIP1P30622 1438 aa17.63■□□□□ 0.41
CHRNB1-202ENST00000536404 PCF11O94913 1555 aaKnown RBP17.63■□□□□ 0.41
CHRNB1-202ENST00000536404 POGZQ7Z3K3 1410 aa17.62■□□□□ 0.41
CHRNB1-202ENST00000536404 ZFYVE16Q7Z3T8 1539 aa17.62■□□□□ 0.41
CHRNB1-202ENST00000536404 MADDQ8WXG6 1647 aa17.62■□□□□ 0.41
CHRNB1-202ENST00000536404 SCAF1Q9H7N4 1312 aaKnown RBP17.61■□□□□ 0.41
CHRNB1-202ENST00000536404 MAGI2Q86UL8 1455 aa17.59■□□□□ 0.41
CHRNB1-202ENST00000536404 SIGLEC1Q9BZZ2 1709 aa17.59■□□□□ 0.41
CHRNB1-202ENST00000536404 ARHGAP5Q13017 1502 aa17.59■□□□□ 0.41
CHRNB1-202ENST00000536404 MLECQ14165 292 aa17.58■□□□□ 0.4
CHRNB1-202ENST00000536404 AFAP1Q8N556 730 aa17.58■□□□□ 0.4
CHRNB1-202ENST00000536404 CCDC18Q5T9S5 1454 aa17.57■□□□□ 0.4
CHRNB1-202ENST00000536404 PLPPR3Q6T4P5 718 aa17.56■□□□□ 0.4
CHRNB1-202ENST00000536404 RIMS1Q86UR5 1692 aaKnown RBP17.55■□□□□ 0.4
CHRNB1-202ENST00000536404 ATP10AO60312 1499 aa17.55■□□□□ 0.4
CHRNB1-202ENST00000536404 FYCO1Q9BQS8 1478 aa17.55■□□□□ 0.4
CHRNB1-202ENST00000536404 CDC42BPBQ9Y5S2 1711 aa17.54■□□□□ 0.4
CHRNB1-202ENST00000536404 ILDR1Q86SU0 546 aaPredicted RBP17.53■□□□□ 0.4
CHRNB1-202ENST00000536404 MYT1LQ9UL68 1186 aa17.52■□□□□ 0.4
CHRNB1-202ENST00000536404 ZNF518AQ6AHZ1 1483 aa17.52■□□□□ 0.39
CHRNB1-202ENST00000536404 ARHGEF12Q9NZN5 1544 aa17.5■□□□□ 0.39
CHRNB1-202ENST00000536404 C9orf84Q5VXU9 1444 aa17.5■□□□□ 0.39
CHRNB1-202ENST00000536404 PREX2Q70Z35 1606 aa17.5■□□□□ 0.39
CHRNB1-202ENST00000536404 TRAPPC8Q9Y2L5 1435 aa17.49■□□□□ 0.39
CHRNB1-202ENST00000536404 KDM5CP41229 1560 aa17.49■□□□□ 0.39
CHRNB1-202ENST00000536404 CDC42BPAQ5VT25 1732 aa17.47■□□□□ 0.39
CHRNB1-202ENST00000536404 ZNF777Q9ULD5 760 aaPredicted RBP17.47■□□□□ 0.39
CHRNB1-202ENST00000536404 LMTK3Q96Q04 1460 aa17.46■□□□□ 0.39
CHRNB1-202ENST00000536404 ABCC1P33527 1531 aa17.46■□□□□ 0.39
CHRNB1-202ENST00000536404 FER1L4A9Z1Z3 1794 aa17.45■□□□□ 0.38
CHRNB1-202ENST00000536404 GPATCH8Q9UKJ3 1502 aaKnown RBP17.44■□□□□ 0.38
CHRNB1-202ENST00000536404 DIP2CQ9Y2E4 1556 aa17.44■□□□□ 0.38
CHRNB1-202ENST00000536404 MLH3Q9UHC1 1453 aa17.44■□□□□ 0.38
CHRNB1-202ENST00000536404 CEBPAP49715 358 aaPredicted RBP17.43■□□□□ 0.38
CHRNB1-202ENST00000536404 HSPA2P54652 639 aa17.43■□□□□ 0.38
CHRNB1-202ENST00000536404 ITSN2Q9NZM3 1697 aa17.43■□□□□ 0.38
CHRNB1-202ENST00000536404 ABCA6Q8N139 1617 aa17.42■□□□□ 0.38
CHRNB1-202ENST00000536404 HNRNPMP52272 730 aaKnown RBP eCLIP17.42■□□□□ 0.38
CHRNB1-202ENST00000536404 CEP162Q5TB80 1403 aa17.42■□□□□ 0.38
CHRNB1-202ENST00000536404 MTUS2Q5JR59 1369 aa17.4■□□□□ 0.38
CHRNB1-202ENST00000536404 SAMD9LQ8IVG5 1584 aa17.4■□□□□ 0.38
CHRNB1-202ENST00000536404 CFDP1Q9UEE9 299 aaPredicted RBP17.39■□□□□ 0.38
CHRNB1-202ENST00000536404 CCNB3Q8WWL7 1395 aa17.39■□□□□ 0.37
CHRNB1-202ENST00000536404 KIDINS220Q9ULH0 1771 aa17.38■□□□□ 0.37
CHRNB1-202ENST00000536404 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
CHRNB1-202ENST00000536404 SYCP2Q9BX26 1530 aa17.37■□□□□ 0.37
CHRNB1-202ENST00000536404 SPAG9O60271 1321 aaKnown RBP17.36■□□□□ 0.37
CHRNB1-202ENST00000536404 AGLP35573 1532 aa17.34■□□□□ 0.37
CHRNB1-202ENST00000536404 ZNF644Q9H582 1327 aaPredicted RBP17.34■□□□□ 0.37
CHRNB1-202ENST00000536404 KIAA1107Q9UPP5 1409 aa17.33■□□□□ 0.37
CHRNB1-202ENST00000536404 CCER1Q8TC90 406 aaPredicted RBP17.32■□□□□ 0.36
CHRNB1-202ENST00000536404 PLEKHH2Q8IVE3 1493 aa17.32■□□□□ 0.36
CHRNB1-202ENST00000536404 ESF1Q9H501 851 aaKnown RBP17.31■□□□□ 0.36
CHRNB1-202ENST00000536404 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
CHRNB1-202ENST00000536404 EHBP1L1Q8N3D4 1523 aa17.31■□□□□ 0.36
CHRNB1-202ENST00000536404 ATP7AQ04656 1500 aa17.28■□□□□ 0.36
CHRNB1-202ENST00000536404 PREX1Q8TCU6 1659 aa17.28■□□□□ 0.36
CHRNB1-202ENST00000536404 FBXO41Q8TF61 875 aa17.28■□□□□ 0.36
CHRNB1-202ENST00000536404 C3P01024 1663 aa17.27■□□□□ 0.36
CHRNB1-202ENST00000536404 SETD1BQ9UPS6 1966 aaKnown RBP17.27■□□□□ 0.35
CHRNB1-202ENST00000536404 SUPT6HQ7KZ85 1726 aaKnown RBP17.26■□□□□ 0.35
CHRNB1-202ENST00000536404 INO80Q9ULG1 1556 aaPredicted RBP17.26■□□□□ 0.35
CHRNB1-202ENST00000536404 MBD5Q9P267 1494 aa17.25■□□□□ 0.35
CHRNB1-202ENST00000536404 CENPBP07199 599 aaPredicted RBP17.25■□□□□ 0.35
CHRNB1-202ENST00000536404 A2MP01023 1474 aa17.25■□□□□ 0.35
CHRNB1-202ENST00000536404 UHRF1BP1Q6BDS2 1440 aa17.24■□□□□ 0.35
CHRNB1-202ENST00000536404 NCOA2Q15596 1464 aa17.24■□□□□ 0.35
CHRNB1-202ENST00000536404 CNTLNQ9NXG0 1405 aa17.23■□□□□ 0.35
CHRNB1-202ENST00000536404 ACIN1Q9UKV3 1341 aaKnown RBP17.22■□□□□ 0.35
CHRNB1-202ENST00000536404 VPS8Q8N3P4 1428 aa17.22■□□□□ 0.35
CHRNB1-202ENST00000536404 GGT6Q6P531 493 aa17.21■□□□□ 0.35
CHRNB1-202ENST00000536404 PLXNC1O60486 1568 aa17.21■□□□□ 0.35
CHRNB1-202ENST00000536404 ZMYM3Q14202 1370 aa17.21■□□□□ 0.35
CHRNB1-202ENST00000536404 STRCQ7RTU9 1775 aa17.19■□□□□ 0.34
CHRNB1-202ENST00000536404 KANK4Q5T7N3 995 aaPredicted RBP17.18■□□□□ 0.34
CHRNB1-202ENST00000536404 CAMSAP2Q08AD1 1489 aa17.18■□□□□ 0.34
CHRNB1-202ENST00000536404 RTEL1-TNFRSF6BF6WH68 1400 aa17.18■□□□□ 0.34
CHRNB1-202ENST00000536404 CERKQ8TCT0 537 aa17.18■□□□□ 0.34
CHRNB1-202ENST00000536404 LRRC9Q6ZRR7 1453 aa17.17■□□□□ 0.34
CHRNB1-202ENST00000536404 CLTCQ00610 1675 aaKnown RBP17.16■□□□□ 0.34
CHRNB1-202ENST00000536404 ADGBQ8N7X0 1667 aa17.16■□□□□ 0.34
CHRNB1-202ENST00000536404 DMRT2Q9Y5R5 561 aa17.16■□□□□ 0.34
CHRNB1-202ENST00000536404 MROH2AA6NES4 1674 aa17.16■□□□□ 0.34
CHRNB1-202ENST00000536404 DHX29Q7Z478 1369 aaKnown RBP17.16■□□□□ 0.34
CHRNB1-202ENST00000536404 CCDC141Q6ZP82 1450 aa17.15■□□□□ 0.34
CHRNB1-202ENST00000536404 DIEXFQ68CQ4 756 aaKnown RBP17.14■□□□□ 0.33
CHRNB1-202ENST00000536404 NPATQ14207 1427 aa17.14■□□□□ 0.33
CHRNB1-202ENST00000536404 RSPH4AQ5TD94 716 aa17.14■□□□□ 0.33
CHRNB1-202ENST00000536404 KIF3BO15066 747 aa17.12■□□□□ 0.33
CHRNB1-202ENST00000536404 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
CHRNB1-202ENST00000536404 PTPRKQ15262 1439 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms