RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 ZMYM4Q5VZL5 1548 aa23.07■■□□□ 1.28
RTN3P1-201ENST00000536295 POGZQ7Z3K3 1410 aa23.07■■□□□ 1.28
RTN3P1-201ENST00000536295 ZFYVE16Q7Z3T8 1539 aa23.05■■□□□ 1.28
RTN3P1-201ENST00000536295 YEATS2Q9ULM3 1422 aa23.05■■□□□ 1.28
RTN3P1-201ENST00000536295 ADAMTSL3P82987 1691 aa23.03■■□□□ 1.28
RTN3P1-201ENST00000536295 BCORL1Q5H9F3 1711 aa23.02■■□□□ 1.28
RTN3P1-201ENST00000536295 MAGI2Q86UL8 1455 aa23.01■■□□□ 1.27
RTN3P1-201ENST00000536295 CEP162Q5TB80 1403 aa22.99■■□□□ 1.27
RTN3P1-201ENST00000536295 HECW2Q9P2P5 1572 aa22.99■■□□□ 1.27
RTN3P1-201ENST00000536295 CDC42BPBQ9Y5S2 1711 aa22.99■■□□□ 1.27
RTN3P1-201ENST00000536295 PTPRMP28827 1452 aa22.98■■□□□ 1.27
RTN3P1-201ENST00000536295 PREX2Q70Z35 1606 aa22.97■■□□□ 1.27
RTN3P1-201ENST00000536295 MADDQ8WXG6 1647 aa22.97■■□□□ 1.27
RTN3P1-201ENST00000536295 AFAP1Q8N556 730 aa22.97■■□□□ 1.27
RTN3P1-201ENST00000536295 MYT1LQ9UL68 1186 aa22.96■■□□□ 1.27
RTN3P1-201ENST00000536295 ZNF518AQ6AHZ1 1483 aa22.96■■□□□ 1.27
RTN3P1-201ENST00000536295 SIGLEC1Q9BZZ2 1709 aa22.94■■□□□ 1.26
RTN3P1-201ENST00000536295 MLECQ14165 292 aa22.94■■□□□ 1.26
RTN3P1-201ENST00000536295 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
RTN3P1-201ENST00000536295 ATP10AO60312 1499 aa22.92■■□□□ 1.26
RTN3P1-201ENST00000536295 CDC42BPAQ5VT25 1732 aa22.91■■□□□ 1.26
RTN3P1-201ENST00000536295 ZNF777Q9ULD5 760 aaPredicted RBP22.91■■□□□ 1.26
RTN3P1-201ENST00000536295 RIMS1Q86UR5 1692 aaKnown RBP22.9■■□□□ 1.26
RTN3P1-201ENST00000536295 MTUS2Q5JR59 1369 aa22.9■■□□□ 1.26
RTN3P1-201ENST00000536295 KDM5CP41229 1560 aa22.9■■□□□ 1.26
RTN3P1-201ENST00000536295 ABCC1P33527 1531 aa22.9■■□□□ 1.26
RTN3P1-201ENST00000536295 C9orf84Q5VXU9 1444 aa22.9■■□□□ 1.26
RTN3P1-201ENST00000536295 ARHGEF12Q9NZN5 1544 aa22.89■■□□□ 1.26
RTN3P1-201ENST00000536295 PLPPR3Q6T4P5 718 aa22.89■■□□□ 1.25
RTN3P1-201ENST00000536295 TRAPPC8Q9Y2L5 1435 aa22.88■■□□□ 1.25
RTN3P1-201ENST00000536295 GPATCH8Q9UKJ3 1502 aaKnown RBP22.87■■□□□ 1.25
RTN3P1-201ENST00000536295 ITSN2Q9NZM3 1697 aa22.86■■□□□ 1.25
RTN3P1-201ENST00000536295 CCNB3Q8WWL7 1395 aa22.85■■□□□ 1.25
RTN3P1-201ENST00000536295 SAMD9LQ8IVG5 1584 aa22.82■■□□□ 1.24
RTN3P1-201ENST00000536295 DIP2CQ9Y2E4 1556 aa22.82■■□□□ 1.24
RTN3P1-201ENST00000536295 MLH3Q9UHC1 1453 aa22.82■■□□□ 1.24
RTN3P1-201ENST00000536295 CFDP1Q9UEE9 299 aaPredicted RBP22.82■■□□□ 1.24
RTN3P1-201ENST00000536295 ABCA6Q8N139 1617 aa22.8■■□□□ 1.24
RTN3P1-201ENST00000536295 HNRNPMP52272 730 aaKnown RBP eCLIP22.8■■□□□ 1.24
RTN3P1-201ENST00000536295 EHBP1L1Q8N3D4 1523 aa22.8■■□□□ 1.24
RTN3P1-201ENST00000536295 SYCP2Q9BX26 1530 aa22.8■■□□□ 1.24
RTN3P1-201ENST00000536295 FER1L4A9Z1Z3 1794 aa22.8■■□□□ 1.24
RTN3P1-201ENST00000536295 TIAM1Q13009 1591 aa22.75■■□□□ 1.23
RTN3P1-201ENST00000536295 KIDINS220Q9ULH0 1771 aa22.74■■□□□ 1.23
RTN3P1-201ENST00000536295 PLEKHH2Q8IVE3 1493 aa22.73■■□□□ 1.23
RTN3P1-201ENST00000536295 REREQ9P2R6 1566 aa22.73■■□□□ 1.23
RTN3P1-201ENST00000536295 SPAG9O60271 1321 aaKnown RBP22.73■■□□□ 1.23
RTN3P1-201ENST00000536295 VPS8Q8N3P4 1428 aa22.73■■□□□ 1.23
RTN3P1-201ENST00000536295 LMTK3Q96Q04 1460 aa22.73■■□□□ 1.23
RTN3P1-201ENST00000536295 ZNF644Q9H582 1327 aaPredicted RBP22.72■■□□□ 1.23
RTN3P1-201ENST00000536295 KIAA1107Q9UPP5 1409 aa22.72■■□□□ 1.23
RTN3P1-201ENST00000536295 CEBPAP49715 358 aaPredicted RBP22.7■■□□□ 1.22
RTN3P1-201ENST00000536295 AGLP35573 1532 aa22.67■■□□□ 1.22
RTN3P1-201ENST00000536295 NCOA2Q15596 1464 aa22.67■■□□□ 1.22
RTN3P1-201ENST00000536295 HSPA2P54652 639 aa22.67■■□□□ 1.22
RTN3P1-201ENST00000536295 SUPT6HQ7KZ85 1726 aaKnown RBP22.67■■□□□ 1.22
RTN3P1-201ENST00000536295 ATP7AQ04656 1500 aa22.67■■□□□ 1.22
RTN3P1-201ENST00000536295 ESF1Q9H501 851 aaKnown RBP22.65■■□□□ 1.22
RTN3P1-201ENST00000536295 INO80Q9ULG1 1556 aaPredicted RBP22.63■■□□□ 1.21
RTN3P1-201ENST00000536295 LRRC9Q6ZRR7 1453 aa22.61■■□□□ 1.21
RTN3P1-201ENST00000536295 MBD5Q9P267 1494 aa22.6■■□□□ 1.21
RTN3P1-201ENST00000536295 A2MP01023 1474 aa22.59■■□□□ 1.21
RTN3P1-201ENST00000536295 KANK4Q5T7N3 995 aaPredicted RBP22.58■■□□□ 1.21
RTN3P1-201ENST00000536295 ILDR1Q86SU0 546 aaPredicted RBP22.58■■□□□ 1.21
RTN3P1-201ENST00000536295 CAMSAP2Q08AD1 1489 aa22.58■■□□□ 1.2
RTN3P1-201ENST00000536295 C3P01024 1663 aa22.55■■□□□ 1.2
RTN3P1-201ENST00000536295 PREX1Q8TCU6 1659 aa22.55■■□□□ 1.2
RTN3P1-201ENST00000536295 PLXNC1O60486 1568 aa22.55■■□□□ 1.2
RTN3P1-201ENST00000536295 CNTLNQ9NXG0 1405 aa22.54■■□□□ 1.2
RTN3P1-201ENST00000536295 MAP3K1Q13233 1512 aa22.53■■□□□ 1.2
RTN3P1-201ENST00000536295 CCDC141Q6ZP82 1450 aa22.53■■□□□ 1.2
RTN3P1-201ENST00000536295 GGT6Q6P531 493 aa22.52■■□□□ 1.2
RTN3P1-201ENST00000536295 ADGBQ8N7X0 1667 aa22.52■■□□□ 1.2
RTN3P1-201ENST00000536295 RTEL1-TNFRSF6BF6WH68 1400 aa22.51■■□□□ 1.19
RTN3P1-201ENST00000536295 UHRF1BP1Q6BDS2 1440 aa22.51■■□□□ 1.19
RTN3P1-201ENST00000536295 APLP2Q06481 763 aa22.49■■□□□ 1.19
RTN3P1-201ENST00000536295 RSPH4AQ5TD94 716 aa22.48■■□□□ 1.19
RTN3P1-201ENST00000536295 ZMYM3Q14202 1370 aa22.47■■□□□ 1.19
RTN3P1-201ENST00000536295 DHX29Q7Z478 1369 aaKnown RBP22.46■■□□□ 1.19
RTN3P1-201ENST00000536295 CLTCQ00610 1675 aaKnown RBP22.46■■□□□ 1.19
RTN3P1-201ENST00000536295 TSPY4P0CV99 314 aa22.45■■□□□ 1.18
RTN3P1-201ENST00000536295 TSPY10P0CW01 314 aa22.45■■□□□ 1.18
RTN3P1-201ENST00000536295 MYOM3Q5VTT5 1437 aa22.45■■□□□ 1.18
RTN3P1-201ENST00000536295 ARHGEF5Q12774 1597 aa22.45■■□□□ 1.18
RTN3P1-201ENST00000536295 MROH2AA6NES4 1674 aa22.45■■□□□ 1.18
RTN3P1-201ENST00000536295 SETD1BQ9UPS6 1966 aaKnown RBP22.45■■□□□ 1.18
RTN3P1-201ENST00000536295 KIF3BO15066 747 aa22.42■■□□□ 1.18
RTN3P1-201ENST00000536295 MIA2Q96PC5 1412 aa22.4■■□□□ 1.18
RTN3P1-201ENST00000536295 NPATQ14207 1427 aa22.39■■□□□ 1.17
RTN3P1-201ENST00000536295 PPP6R1Q9UPN7 881 aa22.38■■□□□ 1.17
RTN3P1-201ENST00000536295 STRCQ7RTU9 1775 aa22.35■■□□□ 1.17
RTN3P1-201ENST00000536295 PTPRKQ15262 1439 aa22.35■■□□□ 1.17
RTN3P1-201ENST00000536295 FBXO41Q8TF61 875 aa22.34■■□□□ 1.17
RTN3P1-201ENST00000536295 MAST1Q9Y2H9 1570 aa22.33■■□□□ 1.17
RTN3P1-201ENST00000536295 DMRT2Q9Y5R5 561 aa22.33■■□□□ 1.17
RTN3P1-201ENST00000536295 WASHC2CQ9Y4E1 1318 aa22.31■■□□□ 1.16
RTN3P1-201ENST00000536295 MYO3AQ8NEV4 1616 aa22.3■■□□□ 1.16
RTN3P1-201ENST00000536295 PTPN23Q9H3S7 1636 aa22.3■■□□□ 1.16
RTN3P1-201ENST00000536295 KDM5DQ9BY66 1539 aa22.3■■□□□ 1.16
RTN3P1-201ENST00000536295 NCOA1Q15788 1441 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms