RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 DMRT2Q9Y5R5 561 aa9.93□□□□□ -0.82
CDCA3-205ENST00000535871 ARAP3Q8WWN8 1544 aa9.92□□□□□ -0.82
CDCA3-205ENST00000535871 WDR7Q9Y4E6 1490 aa9.92□□□□□ -0.82
CDCA3-205ENST00000535871 CCNB3Q8WWL7 1395 aa9.91□□□□□ -0.82
CDCA3-205ENST00000535871 ABCC10Q5T3U5 1492 aa9.91□□□□□ -0.82
CDCA3-205ENST00000535871 PHLDB1Q86UU1 1377 aa9.9□□□□□ -0.82
CDCA3-205ENST00000535871 ITSN2Q9NZM3 1697 aa9.9□□□□□ -0.82
CDCA3-205ENST00000535871 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.9□□□□□ -0.82
CDCA3-205ENST00000535871 HNRNPUL2Q1KMD3 747 aaKnown RBP9.9□□□□□ -0.82
CDCA3-205ENST00000535871 TCOF1Q13428 1488 aaKnown RBP9.9□□□□□ -0.83
CDCA3-205ENST00000535871 FGD6Q6ZV73 1430 aa9.9□□□□□ -0.83
CDCA3-205ENST00000535871 TTBK1Q5TCY1 1321 aaPredicted RBP9.88□□□□□ -0.83
CDCA3-205ENST00000535871 ASXL2Q76L83 1435 aa9.88□□□□□ -0.83
CDCA3-205ENST00000535871 GPATCH8Q9UKJ3 1502 aaKnown RBP9.87□□□□□ -0.83
CDCA3-205ENST00000535871 ACIN1Q9UKV3 1341 aaKnown RBP9.87□□□□□ -0.83
CDCA3-205ENST00000535871 RSPH4AQ5TD94 716 aa9.87□□□□□ -0.83
CDCA3-205ENST00000535871 PLEKHH2Q8IVE3 1493 aa9.86□□□□□ -0.83
CDCA3-205ENST00000535871 ABCA9Q8IUA7 1624 aa9.86□□□□□ -0.83
CDCA3-205ENST00000535871 CYB5RLQ6IPT4 315 aa9.86□□□□□ -0.83
CDCA3-205ENST00000535871 DNAJC5Q9H3Z4 198 aa9.86□□□□□ -0.83
CDCA3-205ENST00000535871 GLI2P10070 1586 aa9.85□□□□□ -0.83
CDCA3-205ENST00000535871 PLCH2O75038 1416 aa9.85□□□□□ -0.83
CDCA3-205ENST00000535871 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.85□□□□□ -0.83
CDCA3-205ENST00000535871 KIAA1107Q9UPP5 1409 aa9.84□□□□□ -0.83
CDCA3-205ENST00000535871 PREX2Q70Z35 1606 aa9.84□□□□□ -0.83
CDCA3-205ENST00000535871 AKNAQ7Z591 1439 aa9.83□□□□□ -0.84
CDCA3-205ENST00000535871 PTPN23Q9H3S7 1636 aa9.83□□□□□ -0.84
CDCA3-205ENST00000535871 CDC42BPAQ5VT25 1732 aa9.83□□□□□ -0.84
CDCA3-205ENST00000535871 HRCP23327 699 aa9.83□□□□□ -0.84
CDCA3-205ENST00000535871 CFDP1Q9UEE9 299 aaPredicted RBP9.83□□□□□ -0.84
CDCA3-205ENST00000535871 MYO5CQ9NQX4 1742 aa9.82□□□□□ -0.84
CDCA3-205ENST00000535871 PPARGC1BQ86YN6 1023 aaKnown RBP9.82□□□□□ -0.84
CDCA3-205ENST00000535871 ARID3CA6NKF2 412 aa9.81□□□□□ -0.84
CDCA3-205ENST00000535871 EFCAB2Q5VUJ9 269 aa9.81□□□□□ -0.84
CDCA3-205ENST00000535871 ARHGEF5Q12774 1597 aa9.8□□□□□ -0.84
CDCA3-205ENST00000535871 TTC37Q6PGP7 1564 aa9.8□□□□□ -0.84
CDCA3-205ENST00000535871 CFAP74Q9C0B2 1584 aa9.8□□□□□ -0.84
CDCA3-205ENST00000535871 SHANK2Q9UPX8 1470 aa9.8□□□□□ -0.84
CDCA3-205ENST00000535871 ROCK1Q13464 1354 aa9.8□□□□□ -0.84
CDCA3-205ENST00000535871 CDC42BPBQ9Y5S2 1711 aa9.79□□□□□ -0.84
CDCA3-205ENST00000535871 PCGF6Q9BYE7 350 aa9.79□□□□□ -0.84
CDCA3-205ENST00000535871 CAMSAP2Q08AD1 1489 aa9.79□□□□□ -0.84
CDCA3-205ENST00000535871 NEO1Q92859 1461 aa9.79□□□□□ -0.84
CDCA3-205ENST00000535871 DNMT1P26358 1616 aaKnown RBP9.78□□□□□ -0.84
CDCA3-205ENST00000535871 CD109Q6YHK3 1445 aa9.77□□□□□ -0.85
CDCA3-205ENST00000535871 MAP3K4Q9Y6R4 1608 aa9.77□□□□□ -0.85
CDCA3-205ENST00000535871 MBD5Q9P267 1494 aa9.77□□□□□ -0.85
CDCA3-205ENST00000535871 ARHGAP5Q13017 1502 aa9.77□□□□□ -0.85
CDCA3-205ENST00000535871 DIP2BQ9P265 1576 aa9.76□□□□□ -0.85
CDCA3-205ENST00000535871 HFM1A2PYH4 1435 aa9.76□□□□□ -0.85
CDCA3-205ENST00000535871 KCNH8Q96L42 1107 aa9.76□□□□□ -0.85
CDCA3-205ENST00000535871 FANCAO15360 1455 aa9.76□□□□□ -0.85
CDCA3-205ENST00000535871 ADGRL2O95490 1459 aa9.76□□□□□ -0.85
CDCA3-205ENST00000535871 DAPK1P53355 1430 aa9.75□□□□□ -0.85
CDCA3-205ENST00000535871 CCDC141Q6ZP82 1450 aa9.75□□□□□ -0.85
CDCA3-205ENST00000535871 TEX14Q8IWB6 1497 aa9.75□□□□□ -0.85
CDCA3-205ENST00000535871 FAM50AQ14320 339 aaKnown RBP9.75□□□□□ -0.85
CDCA3-205ENST00000535871 ABCC1P33527 1531 aa9.75□□□□□ -0.85
CDCA3-205ENST00000535871 SAMD9LQ8IVG5 1584 aa9.75□□□□□ -0.85
CDCA3-205ENST00000535871 MAST1Q9Y2H9 1570 aa9.75□□□□□ -0.85
CDCA3-205ENST00000535871 RTEL1-TNFRSF6BF6WH68 1400 aa9.74□□□□□ -0.85
CDCA3-205ENST00000535871 ABCC5O15440 1437 aa9.74□□□□□ -0.85
CDCA3-205ENST00000535871 TSPY4P0CV99 314 aa9.73□□□□□ -0.85
CDCA3-205ENST00000535871 TSPY10P0CW01 314 aa9.73□□□□□ -0.85
CDCA3-205ENST00000535871 CROCC2H7BZ55 1655 aa9.73□□□□□ -0.85
CDCA3-205ENST00000535871 ANKRD30AQ9BXX3 1397 aa9.72□□□□□ -0.85
CDCA3-205ENST00000535871 NCOA1Q15788 1441 aa9.72□□□□□ -0.85
CDCA3-205ENST00000535871 CLSPNQ9HAW4 1339 aa9.71□□□□□ -0.86
CDCA3-205ENST00000535871 SETD5Q9C0A6 1442 aa9.71□□□□□ -0.86
CDCA3-205ENST00000535871 ZNF518AQ6AHZ1 1483 aa9.71□□□□□ -0.86
CDCA3-205ENST00000535871 ZNF644Q9H582 1327 aaPredicted RBP9.7□□□□□ -0.86
CDCA3-205ENST00000535871 NAIPQ13075 1403 aa9.7□□□□□ -0.86
CDCA3-205ENST00000535871 PTPRKQ15262 1439 aa9.7□□□□□ -0.86
CDCA3-205ENST00000535871 C9orf84Q5VXU9 1444 aa9.7□□□□□ -0.86
CDCA3-205ENST00000535871 ADGRL1O94910 1474 aa9.7□□□□□ -0.86
CDCA3-205ENST00000535871 SYCP2Q9BX26 1530 aa9.7□□□□□ -0.86
CDCA3-205ENST00000535871 PLXNC1O60486 1568 aa9.7□□□□□ -0.86
CDCA3-205ENST00000535871 ADGBQ8N7X0 1667 aa9.7□□□□□ -0.86
CDCA3-205ENST00000535871 FAM69CQ0P6D2 419 aa9.69□□□□□ -0.86
CDCA3-205ENST00000535871 GCC2Q8IWJ2 1684 aa9.69□□□□□ -0.86
CDCA3-205ENST00000535871 KDM5CP41229 1560 aa9.68□□□□□ -0.86
CDCA3-205ENST00000535871 MAGI2Q86UL8 1455 aa9.68□□□□□ -0.86
CDCA3-205ENST00000535871 MLH3Q9UHC1 1453 aa9.68□□□□□ -0.86
CDCA3-205ENST00000535871 SCAPERQ9BY12 1400 aa9.68□□□□□ -0.86
CDCA3-205ENST00000535871 ZNF777Q9ULD5 760 aaPredicted RBP9.68□□□□□ -0.86
CDCA3-205ENST00000535871 KIF13AQ9H1H9 1805 aa9.68□□□□□ -0.86
CDCA3-205ENST00000535871 ARHGEF12Q9NZN5 1544 aa9.67□□□□□ -0.86
CDCA3-205ENST00000535871 POGZQ7Z3K3 1410 aa9.67□□□□□ -0.86
CDCA3-205ENST00000535871 DENND4BO75064 1496 aaPredicted RBP9.66□□□□□ -0.86
CDCA3-205ENST00000535871 ERBINQ96RT1 1412 aa9.65□□□□□ -0.86
CDCA3-205ENST00000535871 HNRNPMP52272 730 aaKnown RBP eCLIP9.65□□□□□ -0.86
CDCA3-205ENST00000535871 ATF5Q9Y2D1 282 aaPredicted RBP9.65□□□□□ -0.86
CDCA3-205ENST00000535871 INO80Q9ULG1 1556 aaPredicted RBP9.65□□□□□ -0.86
CDCA3-205ENST00000535871 ZMYM4Q5VZL5 1548 aa9.65□□□□□ -0.86
CDCA3-205ENST00000535871 DUOX2Q9NRD8 1548 aa9.65□□□□□ -0.86
CDCA3-205ENST00000535871 TRAPPC8Q9Y2L5 1435 aa9.65□□□□□ -0.87
CDCA3-205ENST00000535871 PPRC1Q5VV67 1664 aaKnown RBP9.64□□□□□ -0.87
CDCA3-205ENST00000535871 RAB3GAP2Q9H2M9 1393 aa9.64□□□□□ -0.87
CDCA3-205ENST00000535871 SPAG9O60271 1321 aaKnown RBP9.64□□□□□ -0.87
CDCA3-205ENST00000535871 ZFYVE16Q7Z3T8 1539 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms