RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 DOK7Q18PE1 504 aa8.16□□□□□ -1.1
GYPA-211ENST00000535709 CHGAP10645 457 aaKnown RBP8.15□□□□□ -1.1
GYPA-211ENST00000535709 TMEM92Q6UXU6 159 aa8.15□□□□□ -1.1
GYPA-211ENST00000535709 HOXB3P14651 431 aaPredicted RBP8.14□□□□□ -1.11
GYPA-211ENST00000535709 RYDENQ9NUL5 291 aaKnown RBP8.14□□□□□ -1.11
GYPA-211ENST00000535709 TIMELESSQ9UNS1 1208 aa8.13□□□□□ -1.11
GYPA-211ENST00000535709 RIMBP2O15034 1052 aa8.12□□□□□ -1.11
GYPA-211ENST00000535709 PLCB2Q00722 1185 aa8.12□□□□□ -1.11
GYPA-211ENST00000535709 ZSWIM6Q9HCJ5 1215 aa8.12□□□□□ -1.11
GYPA-211ENST00000535709 ZNF710Q8N1W2 664 aa8.11□□□□□ -1.11
GYPA-211ENST00000535709 ERICH6Q7L0X2 663 aa8.1□□□□□ -1.11
GYPA-211ENST00000535709 KIF3CO14782 793 aa8.09□□□□□ -1.11
GYPA-211ENST00000535709 HOXB1P14653 301 aaPredicted RBP8.09□□□□□ -1.11
GYPA-211ENST00000535709 EMP3P54852 163 aa8.09□□□□□ -1.11
GYPA-211ENST00000535709 HOMEZQ8IX15 550 aa8.09□□□□□ -1.11
GYPA-211ENST00000535709 CDAN1Q8IWY9 1227 aa8.07□□□□□ -1.12
GYPA-211ENST00000535709 MARVELD3Q96A59 401 aa8.07□□□□□ -1.12
GYPA-211ENST00000535709 PPP1R37O75864 691 aa8.06□□□□□ -1.12
GYPA-211ENST00000535709 NKX1-1Q15270 411 aaPredicted RBP8.06□□□□□ -1.12
GYPA-211ENST00000535709 C2orf72A6NCS6 295 aa8.05□□□□□ -1.12
GYPA-211ENST00000535709 TMC2Q8TDI7 906 aa8.05□□□□□ -1.12
GYPA-211ENST00000535709 DCAF8L2P0C7V8 631 aa8.04□□□□□ -1.12
GYPA-211ENST00000535709 RANGAP1P46060 587 aaPredicted RBP8.03□□□□□ -1.12
GYPA-211ENST00000535709 TULP1O00294 542 aaPredicted RBP8.02□□□□□ -1.13
GYPA-211ENST00000535709 TPRNQ4KMQ1 711 aa8.02□□□□□ -1.13
GYPA-211ENST00000535709 HS3ST6Q96QI5 342 aa8.02□□□□□ -1.13
GYPA-211ENST00000535709 PLSCR2Q9NRY7 297 aa8.02□□□□□ -1.13
GYPA-211ENST00000535709 TTBK1Q5TCY1 1321 aaPredicted RBP8.02□□□□□ -1.13
GYPA-211ENST00000535709 SLC34A2O95436 690 aa8.01□□□□□ -1.13
GYPA-211ENST00000535709 GPR153Q6NV75 609 aa8.01□□□□□ -1.13
GYPA-211ENST00000535709 FAM205CA6NFA0 338 aa8□□□□□ -1.13
GYPA-211ENST00000535709 FOXK1P85037 733 aa7.98□□□□□ -1.13
GYPA-211ENST00000535709 GPHNQ9NQX3 736 aaPredicted RBP7.98□□□□□ -1.13
GYPA-211ENST00000535709 ERBB3P21860 1342 aa7.98□□□□□ -1.13
GYPA-211ENST00000535709 GTPBP6O43824 516 aaPredicted RBP7.97□□□□□ -1.13
GYPA-211ENST00000535709 POTEB3A0JP26 581 aa7.95□□□□□ -1.14
GYPA-211ENST00000535709 HAP1P54257 671 aaPredicted RBP7.95□□□□□ -1.14
GYPA-211ENST00000535709 POTEBQ6S5H4 581 aa7.95□□□□□ -1.14
GYPA-211ENST00000535709 ARSIQ5FYB1 569 aa7.94□□□□□ -1.14
GYPA-211ENST00000535709 VSIG10Q8N0Z9 540 aa7.94□□□□□ -1.14
GYPA-211ENST00000535709 CRISPLD2Q9H0B8 497 aa7.94□□□□□ -1.14
GYPA-211ENST00000535709 VARS2Q5ST30 1063 aaKnown RBP7.93□□□□□ -1.14
GYPA-211ENST00000535709 PCDHGA4Q9Y5G9 962 aa7.93□□□□□ -1.14
GYPA-211ENST00000535709 ZNF316A6NFI3 1004 aaPredicted RBP7.92□□□□□ -1.14
GYPA-211ENST00000535709 PLPP6Q8IY26 295 aa7.92□□□□□ -1.14
GYPA-211ENST00000535709 PTCD2Q8WV60 388 aaKnown RBP7.92□□□□□ -1.14
GYPA-211ENST00000535709 KRTAP3-3Q9BYR6 98 aa7.92□□□□□ -1.14
GYPA-211ENST00000535709 KRTAP3-2Q9BYR7 98 aa7.92□□□□□ -1.14
GYPA-211ENST00000535709 DSG2Q14126 1118 aa7.91□□□□□ -1.14
GYPA-211ENST00000535709 BBXQ8WY36 941 aaPredicted RBP7.91□□□□□ -1.14
GYPA-211ENST00000535709 PDE4AP27815 886 aa7.9□□□□□ -1.14
GYPA-211ENST00000535709 MYT1Q01538 1121 aa7.9□□□□□ -1.14
GYPA-211ENST00000535709 ZNF687Q8N1G0 1237 aa7.9□□□□□ -1.14
GYPA-211ENST00000535709 GTF3C3Q9Y5Q9 886 aa7.9□□□□□ -1.14
GYPA-211ENST00000535709 NCKAP5LQ9HCH0 1330 aa7.88□□□□□ -1.15
GYPA-211ENST00000535709 PSDA5PKW4 1024 aaPredicted RBP7.88□□□□□ -1.15
GYPA-211ENST00000535709 NUDT7P0C024 238 aa7.88□□□□□ -1.15
GYPA-211ENST00000535709 PPP1R15BQ5SWA1 713 aa7.88□□□□□ -1.15
GYPA-211ENST00000535709 SPNS2Q8IVW8 549 aa7.88□□□□□ -1.15
GYPA-211ENST00000535709 KHSRPQ92945 711 aaKnown RBP eCLIP7.88□□□□□ -1.151e-7■□□□□ 8.2
GYPA-211ENST00000535709 TBC1D12O60347 775 aa7.87□□□□□ -1.15
GYPA-211ENST00000535709 MFSD10Q14728 455 aa7.86□□□□□ -1.15
GYPA-211ENST00000535709 KDM4FA0A1W2PPD8 638 aa7.85□□□□□ -1.15
GYPA-211ENST00000535709 PBX2P40425 430 aa7.85□□□□□ -1.15
GYPA-211ENST00000535709 LHX6Q9UPM6 363 aa7.85□□□□□ -1.15
GYPA-211ENST00000535709 OXER1Q8TDS5 423 aa7.84□□□□□ -1.15
GYPA-211ENST00000535709 DDX27Q96GQ7 796 aaKnown RBP7.84□□□□□ -1.15
GYPA-211ENST00000535709 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.84□□□□□ -1.15
GYPA-211ENST00000535709 MMRN1Q13201 1228 aa7.83□□□□□ -1.16
GYPA-211ENST00000535709 PAXIP1Q6ZW49 1069 aaPredicted RBP7.82□□□□□ -1.16
GYPA-211ENST00000535709 PTGER2P43116 358 aa7.81□□□□□ -1.16
GYPA-211ENST00000535709 LARP6Q9BRS8 491 aaKnown RBP7.81□□□□□ -1.16
GYPA-211ENST00000535709 SPRYD3Q8NCJ5 442 aa7.8□□□□□ -1.16
GYPA-211ENST00000535709 CFAP44Q96MT7 982 aa7.79□□□□□ -1.16
GYPA-211ENST00000535709 PPP4R3BQ5MIZ7 849 aa7.78□□□□□ -1.16
GYPA-211ENST00000535709 CADPS2Q86UW7 1296 aa7.78□□□□□ -1.16
GYPA-211ENST00000535709 UPF1Q92900 1129 aaKnown RBP eCLIP7.78□□□□□ -1.16
GYPA-211ENST00000535709 LSM11P83369 360 aaKnown RBP eCLIP7.77□□□□□ -1.17
GYPA-211ENST00000535709 ARHGAP33O14559 1287 aa7.74□□□□□ -1.17
GYPA-211ENST00000535709 CAMK2BQ13554 666 aa7.74□□□□□ -1.17
GYPA-211ENST00000535709 TMEM132AQ24JP5 1023 aa7.74□□□□□ -1.17
GYPA-211ENST00000535709 POTEEQ6S8J3 1075 aa7.74□□□□□ -1.17
GYPA-211ENST00000535709 PODXL2Q9NZ53 605 aa7.74□□□□□ -1.17
GYPA-211ENST00000535709 KCNH8Q96L42 1107 aa7.73□□□□□ -1.17
GYPA-211ENST00000535709 ANO8Q9HCE9 1232 aaPredicted RBP7.73□□□□□ -1.17
GYPA-211ENST00000535709 EVI5O60447 810 aa7.72□□□□□ -1.17
GYPA-211ENST00000535709 JPH4Q96JJ6 628 aa7.72□□□□□ -1.17
GYPA-211ENST00000535709 EMILIN3Q9NT22 766 aa7.72□□□□□ -1.17
GYPA-211ENST00000535709 MYT1LQ9UL68 1186 aa7.72□□□□□ -1.17
GYPA-211ENST00000535709 TK2O00142 265 aa7.71□□□□□ -1.18
GYPA-211ENST00000535709 FOSBP53539 338 aa7.71□□□□□ -1.18
GYPA-211ENST00000535709 MAP3K9P80192 1104 aa7.71□□□□□ -1.18
GYPA-211ENST00000535709 ANKRD13DQ6ZTN6 518 aa7.71□□□□□ -1.18
GYPA-211ENST00000535709 RNF166Q96A37 237 aaPredicted RBP7.71□□□□□ -1.18
GYPA-211ENST00000535709 TSHZ2Q9NRE2 1034 aa7.71□□□□□ -1.18
GYPA-211ENST00000535709 ZNF454Q8N9F8 522 aa7.7□□□□□ -1.18
GYPA-211ENST00000535709 KDM2AQ9Y2K7 1162 aa7.7□□□□□ -1.18
GYPA-211ENST00000535709 BCL2L12Q9HB09 334 aa7.69□□□□□ -1.18
GYPA-211ENST00000535709 AXIN2Q9Y2T1 843 aa7.69□□□□□ -1.18
GYPA-211ENST00000535709 ADGRD1Q6QNK2 874 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms