RNA–Protein interactions for RNA: ENST00000535459.5

SOD2-208, Transcript of superoxide dismutase 2, humanhuman

TSL 2

Gene SOD2, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOD2-208ENST00000535459 PREX2Q70Z35 1606 aa19.54■□□□□ 0.72
SOD2-208ENST00000535459 TIAM1Q13009 1591 aa19.53■□□□□ 0.72
SOD2-208ENST00000535459 ADGRL1O94910 1474 aa19.5■□□□□ 0.71
SOD2-208ENST00000535459 PHLDB1Q86UU1 1377 aa19.5■□□□□ 0.71
SOD2-208ENST00000535459 SCAPERQ9BY12 1400 aa19.5■□□□□ 0.71
SOD2-208ENST00000535459 DENND4BO75064 1496 aaPredicted RBP19.49■□□□□ 0.71
SOD2-208ENST00000535459 KANK4Q5T7N3 995 aaPredicted RBP19.49■□□□□ 0.71
SOD2-208ENST00000535459 EFCAB2Q5VUJ9 269 aa19.49■□□□□ 0.71
SOD2-208ENST00000535459 EHBP1L1Q8N3D4 1523 aa19.49■□□□□ 0.71
SOD2-208ENST00000535459 GPATCH8Q9UKJ3 1502 aaKnown RBP19.48■□□□□ 0.71
SOD2-208ENST00000535459 KDM4FA0A1W2PPD8 638 aa19.47■□□□□ 0.71
SOD2-208ENST00000535459 ZNF777Q9ULD5 760 aaPredicted RBP19.46■□□□□ 0.71
SOD2-208ENST00000535459 ARHGEF12Q9NZN5 1544 aa19.46■□□□□ 0.71
SOD2-208ENST00000535459 SAMD9LQ8IVG5 1584 aa19.44■□□□□ 0.7
SOD2-208ENST00000535459 ITSN2Q9NZM3 1697 aa19.43■□□□□ 0.7
SOD2-208ENST00000535459 LRRC9Q6ZRR7 1453 aa19.43■□□□□ 0.7
SOD2-208ENST00000535459 SIGLEC1Q9BZZ2 1709 aa19.43■□□□□ 0.7
SOD2-208ENST00000535459 CCNB3Q8WWL7 1395 aa19.43■□□□□ 0.7
SOD2-208ENST00000535459 POGZQ7Z3K3 1410 aa19.42■□□□□ 0.7
SOD2-208ENST00000535459 YEATS2Q9ULM3 1422 aa19.42■□□□□ 0.7
SOD2-208ENST00000535459 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
SOD2-208ENST00000535459 AFAP1Q8N556 730 aa19.42■□□□□ 0.7
SOD2-208ENST00000535459 NCOA2Q15596 1464 aa19.41■□□□□ 0.7
SOD2-208ENST00000535459 ABCC1P33527 1531 aa19.41■□□□□ 0.7
SOD2-208ENST00000535459 ZNF644Q9H582 1327 aaPredicted RBP19.41■□□□□ 0.7
SOD2-208ENST00000535459 TRAPPC8Q9Y2L5 1435 aa19.41■□□□□ 0.7
SOD2-208ENST00000535459 ZMYM4Q5VZL5 1548 aa19.39■□□□□ 0.69
SOD2-208ENST00000535459 HNRNPMP52272 730 aaKnown RBP eCLIP19.38■□□□□ 0.69
SOD2-208ENST00000535459 CFDP1Q9UEE9 299 aaPredicted RBP19.38■□□□□ 0.69
SOD2-208ENST00000535459 ARHGEF40Q8TER5 1519 aa19.37■□□□□ 0.69
SOD2-208ENST00000535459 SYCP2Q9BX26 1530 aa19.37■□□□□ 0.69
SOD2-208ENST00000535459 MAP3K1Q13233 1512 aa19.36■□□□□ 0.69
SOD2-208ENST00000535459 ZFYVE16Q7Z3T8 1539 aa19.35■□□□□ 0.69
SOD2-208ENST00000535459 KDM5CP41229 1560 aa19.35■□□□□ 0.69
SOD2-208ENST00000535459 ZNF518AQ6AHZ1 1483 aa19.33■□□□□ 0.68
SOD2-208ENST00000535459 MYT1LQ9UL68 1186 aa19.31■□□□□ 0.68
SOD2-208ENST00000535459 KIDINS220Q9ULH0 1771 aa19.31■□□□□ 0.68
SOD2-208ENST00000535459 HECW2Q9P2P5 1572 aa19.31■□□□□ 0.68
SOD2-208ENST00000535459 ABCA6Q8N139 1617 aa19.3■□□□□ 0.68
SOD2-208ENST00000535459 APLP2Q06481 763 aa19.3■□□□□ 0.68
SOD2-208ENST00000535459 ARID4BQ4LE39 1312 aaPredicted RBP19.29■□□□□ 0.68
SOD2-208ENST00000535459 PPARGC1BQ86YN6 1023 aaKnown RBP19.28■□□□□ 0.68
SOD2-208ENST00000535459 BCORL1Q5H9F3 1711 aa19.28■□□□□ 0.68
SOD2-208ENST00000535459 DIP2CQ9Y2E4 1556 aa19.27■□□□□ 0.68
SOD2-208ENST00000535459 CAMSAP2Q08AD1 1489 aa19.27■□□□□ 0.67
SOD2-208ENST00000535459 MAGI2Q86UL8 1455 aa19.27■□□□□ 0.67
SOD2-208ENST00000535459 ADAMTSL3P82987 1691 aa19.26■□□□□ 0.67
SOD2-208ENST00000535459 ATP10AO60312 1499 aa19.25■□□□□ 0.67
SOD2-208ENST00000535459 MBD5Q9P267 1494 aa19.25■□□□□ 0.67
SOD2-208ENST00000535459 MLECQ14165 292 aa19.25■□□□□ 0.67
SOD2-208ENST00000535459 KIAA1107Q9UPP5 1409 aa19.25■□□□□ 0.67
SOD2-208ENST00000535459 MLH3Q9UHC1 1453 aa19.24■□□□□ 0.67
SOD2-208ENST00000535459 MADDQ8WXG6 1647 aa19.23■□□□□ 0.67
SOD2-208ENST00000535459 PLEKHH2Q8IVE3 1493 aa19.22■□□□□ 0.67
SOD2-208ENST00000535459 MYOM3Q5VTT5 1437 aa19.22■□□□□ 0.67
SOD2-208ENST00000535459 C9orf84Q5VXU9 1444 aa19.21■□□□□ 0.67
SOD2-208ENST00000535459 INO80Q9ULG1 1556 aaPredicted RBP19.21■□□□□ 0.67
SOD2-208ENST00000535459 SPAG9O60271 1321 aaKnown RBP19.21■□□□□ 0.67
SOD2-208ENST00000535459 RIMS1Q86UR5 1692 aaKnown RBP19.2■□□□□ 0.66
SOD2-208ENST00000535459 ATP7AQ04656 1500 aa19.2■□□□□ 0.66
SOD2-208ENST00000535459 PTPN23Q9H3S7 1636 aa19.16■□□□□ 0.66
SOD2-208ENST00000535459 PLPPR3Q6T4P5 718 aa19.16■□□□□ 0.66
SOD2-208ENST00000535459 FER1L4A9Z1Z3 1794 aa19.16■□□□□ 0.66
SOD2-208ENST00000535459 ADGBQ8N7X0 1667 aa19.15■□□□□ 0.66
SOD2-208ENST00000535459 FOXD1Q16676 465 aa19.15■□□□□ 0.66
SOD2-208ENST00000535459 CCDC141Q6ZP82 1450 aa19.14■□□□□ 0.65
SOD2-208ENST00000535459 ARHGEF5Q12774 1597 aa19.14■□□□□ 0.65
SOD2-208ENST00000535459 MIA2Q96PC5 1412 aa19.13■□□□□ 0.65
SOD2-208ENST00000535459 REREQ9P2R6 1566 aa19.13■□□□□ 0.65
SOD2-208ENST00000535459 PTPRMP28827 1452 aa19.12■□□□□ 0.65
SOD2-208ENST00000535459 FGD6Q6ZV73 1430 aa19.12■□□□□ 0.65
SOD2-208ENST00000535459 A2MP01023 1474 aa19.09■□□□□ 0.65
SOD2-208ENST00000535459 PLXNC1O60486 1568 aa19.08■□□□□ 0.65
SOD2-208ENST00000535459 CROCC2H7BZ55 1655 aa19.08■□□□□ 0.64
SOD2-208ENST00000535459 AGLP35573 1532 aa19.07■□□□□ 0.64
SOD2-208ENST00000535459 TCOF1Q13428 1488 aaKnown RBP19.07■□□□□ 0.64
SOD2-208ENST00000535459 RTEL1-TNFRSF6BF6WH68 1400 aa19.07■□□□□ 0.64
SOD2-208ENST00000535459 CEBPAP49715 358 aaPredicted RBP19.06■□□□□ 0.64
SOD2-208ENST00000535459 ABCC5O15440 1437 aa19.06■□□□□ 0.64
SOD2-208ENST00000535459 FAM50AQ14320 339 aaKnown RBP19.04■□□□□ 0.64
SOD2-208ENST00000535459 DNMT1P26358 1616 aaKnown RBP19.03■□□□□ 0.64
SOD2-208ENST00000535459 MAST1Q9Y2H9 1570 aa19.03■□□□□ 0.64
SOD2-208ENST00000535459 TSPY4P0CV99 314 aa19.03■□□□□ 0.64
SOD2-208ENST00000535459 TSPY10P0CW01 314 aa19.03■□□□□ 0.64
SOD2-208ENST00000535459 RSPH4AQ5TD94 716 aa19.03■□□□□ 0.64
SOD2-208ENST00000535459 DAPK1P53355 1430 aa19.02■□□□□ 0.64
SOD2-208ENST00000535459 CHIC2Q9UKJ5 165 aa19.02■□□□□ 0.64
SOD2-208ENST00000535459 GGT6Q6P531 493 aa19.01■□□□□ 0.63
SOD2-208ENST00000535459 DHX29Q7Z478 1369 aaKnown RBP19.01■□□□□ 0.63
SOD2-208ENST00000535459 C3P01024 1663 aa19■□□□□ 0.63
SOD2-208ENST00000535459 CLTCQ00610 1675 aaKnown RBP19■□□□□ 0.63
SOD2-208ENST00000535459 KIF3BO15066 747 aa18.98■□□□□ 0.63
SOD2-208ENST00000535459 RRP7BPQ9NSQ0 103 aa18.97■□□□□ 0.63
SOD2-208ENST00000535459 PTPRKQ15262 1439 aa18.96■□□□□ 0.63
SOD2-208ENST00000535459 SHANK2Q9UPX8 1470 aa18.94■□□□□ 0.62
SOD2-208ENST00000535459 ITGAEP38570 1179 aa18.92■□□□□ 0.62
SOD2-208ENST00000535459 KIF15Q9NS87 1388 aa18.92■□□□□ 0.62
SOD2-208ENST00000535459 ESF1Q9H501 851 aaKnown RBP18.91■□□□□ 0.62
SOD2-208ENST00000535459 CFAP65Q6ZU64 1925 aaKnown RBP18.91■□□□□ 0.62
SOD2-208ENST00000535459 MROH2AA6NES4 1674 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms