RNA–Protein interactions for RNA: ENST00000535406.5

CDCA3-204, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDCA3, Length 1,327 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-204ENST00000535406 RAPGEF3O95398 923 aa15.2■□□□□ 0.02
CDCA3-204ENST00000535406 RICTORQ6R327 1708 aa15.2■□□□□ 0.02
CDCA3-204ENST00000535406 DENND4BO75064 1496 aaPredicted RBP15.2■□□□□ 0.02
CDCA3-204ENST00000535406 ARHGAP5Q13017 1502 aa15.17■□□□□ 0.02
CDCA3-204ENST00000535406 ZMYM4Q5VZL5 1548 aa15.16■□□□□ 0.02
CDCA3-204ENST00000535406 ARHGEF40Q8TER5 1519 aa15.16■□□□□ 0.02
CDCA3-204ENST00000535406 PREX2Q70Z35 1606 aa15.15■□□□□ 0.02
CDCA3-204ENST00000535406 EFCAB2Q5VUJ9 269 aa15.14■□□□□ 0.01
CDCA3-204ENST00000535406 POGZQ7Z3K3 1410 aa15.14■□□□□ 0.01
CDCA3-204ENST00000535406 SCAPERQ9BY12 1400 aa15.14■□□□□ 0.01
CDCA3-204ENST00000535406 CDC42BPBQ9Y5S2 1711 aa15.14■□□□□ 0.01
CDCA3-204ENST00000535406 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
CDCA3-204ENST00000535406 ZFYVE16Q7Z3T8 1539 aa15.11■□□□□ 0.01
CDCA3-204ENST00000535406 CDC42BPAQ5VT25 1732 aa15.11■□□□□ 0.01
CDCA3-204ENST00000535406 MAGI2Q86UL8 1455 aa15.1■□□□□ 0.01
CDCA3-204ENST00000535406 EHBP1L1Q8N3D4 1523 aa15.09■□□□□ 0.01
CDCA3-204ENST00000535406 ZNF518AQ6AHZ1 1483 aa15.09■□□□□ 0.01
CDCA3-204ENST00000535406 MTUS2Q5JR59 1369 aa15.09■□□□□ 0.01
CDCA3-204ENST00000535406 ABCC1P33527 1531 aa15.08■□□□□ 0
CDCA3-204ENST00000535406 VPS8Q8N3P4 1428 aa15.07■□□□□ 0
CDCA3-204ENST00000535406 YEATS2Q9ULM3 1422 aa15.07■□□□□ 0
CDCA3-204ENST00000535406 KDM5CP41229 1560 aa15.07■□□□□ 0
CDCA3-204ENST00000535406 ITSN2Q9NZM3 1697 aa15.06■□□□□ 0
CDCA3-204ENST00000535406 BCORL1Q5H9F3 1711 aa15.06■□□□□ 0
CDCA3-204ENST00000535406 PIAS4Q8N2W9 510 aaPredicted RBP15.05■□□□□ -0
CDCA3-204ENST00000535406 ARID4BQ4LE39 1312 aaPredicted RBP15.05■□□□□ -0
CDCA3-204ENST00000535406 ADAMTSL3P82987 1691 aa15.04■□□□□ -0
CDCA3-204ENST00000535406 GPATCH8Q9UKJ3 1502 aaKnown RBP15.04■□□□□ -0
CDCA3-204ENST00000535406 HECW2Q9P2P5 1572 aa15.04■□□□□ -0
CDCA3-204ENST00000535406 TIAM1Q13009 1591 aa15.03■□□□□ -0
CDCA3-204ENST00000535406 PPP4R3CPQ6ZMV5 832 aa15.03■□□□□ -0
CDCA3-204ENST00000535406 SAMD9LQ8IVG5 1584 aa15.03■□□□□ -0
CDCA3-204ENST00000535406 CCNB3Q8WWL7 1395 aa15.03■□□□□ -0
CDCA3-204ENST00000535406 SIGLEC1Q9BZZ2 1709 aa15.01□□□□□ -0.01
CDCA3-204ENST00000535406 ARHGEF12Q9NZN5 1544 aa15.01□□□□□ -0.01
CDCA3-204ENST00000535406 MADDQ8WXG6 1647 aa15.01□□□□□ -0.01
CDCA3-204ENST00000535406 C9orf84Q5VXU9 1444 aa15.01□□□□□ -0.01
CDCA3-204ENST00000535406 SYCP2Q9BX26 1530 aa15□□□□□ -0.01
CDCA3-204ENST00000535406 AFAP1Q8N556 730 aa15□□□□□ -0.01
CDCA3-204ENST00000535406 SUPT6HQ7KZ85 1726 aaKnown RBP15□□□□□ -0.01
CDCA3-204ENST00000535406 TRAPPC8Q9Y2L5 1435 aa15□□□□□ -0.01
CDCA3-204ENST00000535406 ATP10AO60312 1499 aa15□□□□□ -0.01
CDCA3-204ENST00000535406 ZNF777Q9ULD5 760 aaPredicted RBP14.99□□□□□ -0.01
CDCA3-204ENST00000535406 DIP2CQ9Y2E4 1556 aa14.99□□□□□ -0.01
CDCA3-204ENST00000535406 CFDP1Q9UEE9 299 aaPredicted RBP14.98□□□□□ -0.01
CDCA3-204ENST00000535406 MYT1LQ9UL68 1186 aa14.98□□□□□ -0.01
CDCA3-204ENST00000535406 PLEKHH2Q8IVE3 1493 aa14.98□□□□□ -0.01
CDCA3-204ENST00000535406 MLH3Q9UHC1 1453 aa14.98□□□□□ -0.01
CDCA3-204ENST00000535406 ABCA6Q8N139 1617 aa14.98□□□□□ -0.01
CDCA3-204ENST00000535406 PTPRMP28827 1452 aa14.97□□□□□ -0.01
CDCA3-204ENST00000535406 RIMS1Q86UR5 1692 aaKnown RBP14.96□□□□□ -0.01
CDCA3-204ENST00000535406 NCOA2Q15596 1464 aa14.96□□□□□ -0.01
CDCA3-204ENST00000535406 REREQ9P2R6 1566 aa14.96□□□□□ -0.02
CDCA3-204ENST00000535406 KIAA1107Q9UPP5 1409 aa14.96□□□□□ -0.02
CDCA3-204ENST00000535406 KIDINS220Q9ULH0 1771 aa14.95□□□□□ -0.02
CDCA3-204ENST00000535406 MAP3K1Q13233 1512 aa14.95□□□□□ -0.02
CDCA3-204ENST00000535406 LRRC9Q6ZRR7 1453 aa14.95□□□□□ -0.02
CDCA3-204ENST00000535406 FER1L4A9Z1Z3 1794 aa14.94□□□□□ -0.02
CDCA3-204ENST00000535406 HNRNPMP52272 730 aaKnown RBP eCLIP14.92□□□□□ -0.02
CDCA3-204ENST00000535406 MLECQ14165 292 aa14.92□□□□□ -0.02
CDCA3-204ENST00000535406 INO80Q9ULG1 1556 aaPredicted RBP14.91□□□□□ -0.02
CDCA3-204ENST00000535406 ATP7AQ04656 1500 aa14.91□□□□□ -0.02
CDCA3-204ENST00000535406 SPAG9O60271 1321 aaKnown RBP14.9□□□□□ -0.02
CDCA3-204ENST00000535406 AGLP35573 1532 aa14.89□□□□□ -0.03
CDCA3-204ENST00000535406 CAMSAP2Q08AD1 1489 aa14.89□□□□□ -0.03
CDCA3-204ENST00000535406 NCBP3Q53F19 620 aaKnown RBP14.89□□□□□ -0.03
CDCA3-204ENST00000535406 ZNF644Q9H582 1327 aaPredicted RBP14.88□□□□□ -0.03
CDCA3-204ENST00000535406 SLC4A1APQ9BWU0 796 aaKnown RBP14.88□□□□□ -0.03
CDCA3-204ENST00000535406 MBD5Q9P267 1494 aa14.87□□□□□ -0.03
CDCA3-204ENST00000535406 KANK4Q5T7N3 995 aaPredicted RBP14.87□□□□□ -0.03
CDCA3-204ENST00000535406 APLP2Q06481 763 aa14.86□□□□□ -0.03
CDCA3-204ENST00000535406 CCDC141Q6ZP82 1450 aa14.86□□□□□ -0.03
CDCA3-204ENST00000535406 PLXNC1O60486 1568 aa14.85□□□□□ -0.03
CDCA3-204ENST00000535406 ADGBQ8N7X0 1667 aa14.84□□□□□ -0.03
CDCA3-204ENST00000535406 A2MP01023 1474 aa14.83□□□□□ -0.04
CDCA3-204ENST00000535406 MYOM3Q5VTT5 1437 aa14.83□□□□□ -0.04
CDCA3-204ENST00000535406 ARHGEF5Q12774 1597 aa14.82□□□□□ -0.04
CDCA3-204ENST00000535406 RTEL1-TNFRSF6BF6WH68 1400 aa14.82□□□□□ -0.04
CDCA3-204ENST00000535406 LMTK3Q96Q04 1460 aa14.81□□□□□ -0.04
CDCA3-204ENST00000535406 MIA2Q96PC5 1412 aa14.8□□□□□ -0.04
CDCA3-204ENST00000535406 RSPH4AQ5TD94 716 aa14.79□□□□□ -0.04
CDCA3-204ENST00000535406 ESF1Q9H501 851 aaKnown RBP14.79□□□□□ -0.04
CDCA3-204ENST00000535406 CNTLNQ9NXG0 1405 aa14.77□□□□□ -0.04
CDCA3-204ENST00000535406 C3P01024 1663 aa14.77□□□□□ -0.04
CDCA3-204ENST00000535406 PREX1Q8TCU6 1659 aa14.77□□□□□ -0.05
CDCA3-204ENST00000535406 MROH2AA6NES4 1674 aa14.76□□□□□ -0.05
CDCA3-204ENST00000535406 MAST1Q9Y2H9 1570 aa14.75□□□□□ -0.05
CDCA3-204ENST00000535406 CEBPAP49715 358 aaPredicted RBP14.75□□□□□ -0.05
CDCA3-204ENST00000535406 PTPN23Q9H3S7 1636 aa14.75□□□□□ -0.05
CDCA3-204ENST00000535406 TSPY4P0CV99 314 aa14.74□□□□□ -0.05
CDCA3-204ENST00000535406 TSPY10P0CW01 314 aa14.74□□□□□ -0.05
CDCA3-204ENST00000535406 DHX29Q7Z478 1369 aaKnown RBP14.74□□□□□ -0.05
CDCA3-204ENST00000535406 CLTCQ00610 1675 aaKnown RBP14.73□□□□□ -0.05
CDCA3-204ENST00000535406 CROCC2H7BZ55 1655 aa14.72□□□□□ -0.05
CDCA3-204ENST00000535406 FGD6Q6ZV73 1430 aa14.72□□□□□ -0.05
CDCA3-204ENST00000535406 GGT6Q6P531 493 aa14.71□□□□□ -0.05
CDCA3-204ENST00000535406 UHRF1BP1Q6BDS2 1440 aa14.71□□□□□ -0.06
CDCA3-204ENST00000535406 TCOF1Q13428 1488 aaKnown RBP14.7□□□□□ -0.06
CDCA3-204ENST00000535406 SHANK2Q9UPX8 1470 aa14.7□□□□□ -0.06
CDCA3-204ENST00000535406 HSPA2P54652 639 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms