RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 MRS2Q9HD23 443 aa14.16□□□□□ -0.14
DDB1-204ENST00000535147 CDK11AQ9UQ88 783 aaPredicted RBP14.16□□□□□ -0.14
DDB1-204ENST00000535147 PDS5BQ9NTI5 1447 aa14.15□□□□□ -0.14
DDB1-204ENST00000535147 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
DDB1-204ENST00000535147 ZNF644Q9H582 1327 aaPredicted RBP14.14□□□□□ -0.15
DDB1-204ENST00000535147 AKNAQ7Z591 1439 aa14.14□□□□□ -0.15
DDB1-204ENST00000535147 NCOA1Q15788 1441 aa14.13□□□□□ -0.15
DDB1-204ENST00000535147 CNGB1Q14028 1251 aaPredicted RBP14.13□□□□□ -0.15
DDB1-204ENST00000535147 MIA2Q96PC5 1412 aa14.13□□□□□ -0.15
DDB1-204ENST00000535147 TARBP1Q13395 1621 aaKnown RBP14.12□□□□□ -0.15
DDB1-204ENST00000535147 KIF21AQ7Z4S6 1674 aa14.12□□□□□ -0.15
DDB1-204ENST00000535147 ANKRD30BQ9BXX2 1392 aa14.11□□□□□ -0.15
DDB1-204ENST00000535147 SLC4A1APQ9BWU0 796 aaKnown RBP14.11□□□□□ -0.15
DDB1-204ENST00000535147 IQGAP2Q13576 1575 aa14.11□□□□□ -0.15
DDB1-204ENST00000535147 KIF7Q2M1P5 1343 aa14.1□□□□□ -0.15
DDB1-204ENST00000535147 PPP4R2Q9NY27 417 aa14.1□□□□□ -0.15
DDB1-204ENST00000535147 B4GALNT3Q6L9W6 998 aa14.09□□□□□ -0.15
DDB1-204ENST00000535147 RPRD2Q5VT52 1461 aaKnown RBP14.09□□□□□ -0.15
DDB1-204ENST00000535147 DAPK1P53355 1430 aa14.09□□□□□ -0.15
DDB1-204ENST00000535147 WDR62O43379 1518 aa14.09□□□□□ -0.15
DDB1-204ENST00000535147 ABCC5O15440 1437 aa14.08□□□□□ -0.16
DDB1-204ENST00000535147 TEX14Q8IWB6 1497 aa14.08□□□□□ -0.16
DDB1-204ENST00000535147 ZBED9Q6R2W3 1325 aa14.07□□□□□ -0.16
DDB1-204ENST00000535147 FANCIQ9NVI1 1328 aa14.07□□□□□ -0.16
DDB1-204ENST00000535147 POLR3GLQ9BT43 218 aa14.06□□□□□ -0.16
DDB1-204ENST00000535147 SPATA31E1Q6ZUB1 1445 aa14.06□□□□□ -0.16
DDB1-204ENST00000535147 BCL11AQ9H165 835 aa14.05□□□□□ -0.16
DDB1-204ENST00000535147 SENP3-EIF4A1A0A087X0R7 540 aa14.05□□□□□ -0.16
DDB1-204ENST00000535147 ZNF326Q5BKZ1 582 aaKnown RBP14.05□□□□□ -0.16
DDB1-204ENST00000535147 PBRM1Q86U86 1689 aa14.05□□□□□ -0.16
DDB1-204ENST00000535147 ROCK1Q13464 1354 aa14.05□□□□□ -0.16
DDB1-204ENST00000535147 ERICH6BQ5W0A0 696 aa14.05□□□□□ -0.16
DDB1-204ENST00000535147 ADAMTS12P58397 1594 aa14.03□□□□□ -0.16
DDB1-204ENST00000535147 ERICH6Q7L0X2 663 aa14.01□□□□□ -0.17
DDB1-204ENST00000535147 DNMT1P26358 1616 aaKnown RBP14.01□□□□□ -0.17
DDB1-204ENST00000535147 ZNF777Q9ULD5 760 aaPredicted RBP14□□□□□ -0.17
DDB1-204ENST00000535147 NUP153P49790 1475 aaKnown RBP14□□□□□ -0.17
DDB1-204ENST00000535147 PZPP20742 1482 aa13.98□□□□□ -0.17
DDB1-204ENST00000535147 ZNF608Q9ULD9 1512 aaPredicted RBP13.98□□□□□ -0.17
DDB1-204ENST00000535147 CFDP1Q9UEE9 299 aaPredicted RBP13.98□□□□□ -0.17
DDB1-204ENST00000535147 DISP1Q96F81 1524 aa13.98□□□□□ -0.17
DDB1-204ENST00000535147 PRG4Q92954 1404 aaPredicted RBP13.98□□□□□ -0.17
DDB1-204ENST00000535147 DHX29Q7Z478 1369 aaKnown RBP13.97□□□□□ -0.17
DDB1-204ENST00000535147 USP47Q96K76 1375 aa13.97□□□□□ -0.17
DDB1-204ENST00000535147 PKD2Q13563 968 aa13.96□□□□□ -0.17
DDB1-204ENST00000535147 KIAA0556O60303 1618 aa13.95□□□□□ -0.18
DDB1-204ENST00000535147 KIAA0586Q9BVV6 1533 aa13.94□□□□□ -0.18
DDB1-204ENST00000535147 CAMSAP2Q08AD1 1489 aa13.94□□□□□ -0.18
DDB1-204ENST00000535147 BCORL1Q5H9F3 1711 aa13.93□□□□□ -0.18
DDB1-204ENST00000535147 POLR1AO95602 1720 aaPredicted RBP13.93□□□□□ -0.18
DDB1-204ENST00000535147 RAPGEF6Q8TEU7 1601 aa13.93□□□□□ -0.18
DDB1-204ENST00000535147 KIAA1107Q9UPP5 1409 aa13.92□□□□□ -0.18
DDB1-204ENST00000535147 NUDCQ9Y266 331 aa13.92□□□□□ -0.18
DDB1-204ENST00000535147 MBD5Q9P267 1494 aa13.92□□□□□ -0.18
DDB1-204ENST00000535147 MRC2Q9UBG0 1479 aa13.92□□□□□ -0.18
DDB1-204ENST00000535147 SMG6Q86US8 1419 aaKnown RBP13.92□□□□□ -0.18
DDB1-204ENST00000535147 TROQ12816 1431 aaPredicted RBP13.91□□□□□ -0.18
DDB1-204ENST00000535147 PLB1Q6P1J6 1458 aa13.9□□□□□ -0.18
DDB1-204ENST00000535147 GPATCH8Q9UKJ3 1502 aaKnown RBP13.9□□□□□ -0.18
DDB1-204ENST00000535147 KDM2AQ9Y2K7 1162 aa13.89□□□□□ -0.19
DDB1-204ENST00000535147 TMC1Q8TDI8 760 aa13.88□□□□□ -0.19
DDB1-204ENST00000535147 PNISRQ8TF01 805 aaKnown RBP13.88□□□□□ -0.19
DDB1-204ENST00000535147 CCDC136Q96JN2 1154 aa13.88□□□□□ -0.19
DDB1-204ENST00000535147 CARD11Q9BXL7 1154 aa13.88□□□□□ -0.19
DDB1-204ENST00000535147 KIF14Q15058 1648 aa13.88□□□□□ -0.19
DDB1-204ENST00000535147 GRIN2AQ12879 1464 aa13.87□□□□□ -0.19
DDB1-204ENST00000535147 ANKRD30AQ9BXX3 1397 aa13.87□□□□□ -0.19
DDB1-204ENST00000535147 FBLN2P98095 1184 aa13.87□□□□□ -0.19
DDB1-204ENST00000535147 ANKRD50Q9ULJ7 1429 aa13.87□□□□□ -0.19
DDB1-204ENST00000535147 NUP155O75694 1391 aa13.86□□□□□ -0.19
DDB1-204ENST00000535147 KDM5CP41229 1560 aa13.86□□□□□ -0.19
DDB1-204ENST00000535147 IFT140Q96RY7 1462 aa13.86□□□□□ -0.19
DDB1-204ENST00000535147 RNF123Q5XPI4 1314 aa13.86□□□□□ -0.19
DDB1-204ENST00000535147 ST20-MTHFSA0A0A6YYL1 179 aa13.85□□□□□ -0.19
DDB1-204ENST00000535147 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
DDB1-204ENST00000535147 ADGRL2O95490 1459 aa13.84□□□□□ -0.19
DDB1-204ENST00000535147 ADGBQ8N7X0 1667 aa13.84□□□□□ -0.19
DDB1-204ENST00000535147 CHMP7Q8WUX9 453 aaPredicted RBP13.83□□□□□ -0.19
DDB1-204ENST00000535147 ARID4BQ4LE39 1312 aaPredicted RBP13.83□□□□□ -0.2
DDB1-204ENST00000535147 DCAF11Q8TEB1 546 aa13.83□□□□□ -0.2
DDB1-204ENST00000535147 NOP58Q9Y2X3 529 aaKnown RBP13.83□□□□□ -0.2
DDB1-204ENST00000535147 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
DDB1-204ENST00000535147 ITSN2Q9NZM3 1697 aa13.82□□□□□ -0.2
DDB1-204ENST00000535147 NBR1Q14596 966 aa13.82□□□□□ -0.2
DDB1-204ENST00000535147 RALGAPBQ86X10 1494 aa13.81□□□□□ -0.2
DDB1-204ENST00000535147 UHRF1BP1Q6BDS2 1440 aa13.8□□□□□ -0.2
DDB1-204ENST00000535147 ROCK2O75116 1388 aaKnown RBP13.8□□□□□ -0.2
DDB1-204ENST00000535147 KIF15Q9NS87 1388 aa13.8□□□□□ -0.2
DDB1-204ENST00000535147 CROCC2H7BZ55 1655 aa13.8□□□□□ -0.2
DDB1-204ENST00000535147 EIF4G3O43432 1585 aaKnown RBP13.8□□□□□ -0.2
DDB1-204ENST00000535147 PLEKHD1A6NEE1 506 aa13.79□□□□□ -0.2
DDB1-204ENST00000535147 JPH4Q96JJ6 628 aa13.79□□□□□ -0.2
DDB1-204ENST00000535147 C9orf84Q5VXU9 1444 aa13.79□□□□□ -0.2
DDB1-204ENST00000535147 HNRNPMP52272 730 aaKnown RBP eCLIP13.78□□□□□ -0.2
DDB1-204ENST00000535147 TSPY4P0CV99 314 aa13.78□□□□□ -0.2
DDB1-204ENST00000535147 TSPY10P0CW01 314 aa13.78□□□□□ -0.2
DDB1-204ENST00000535147 CEP170Q5SW79 1584 aa13.78□□□□□ -0.2
DDB1-204ENST00000535147 MYBBP1AQ9BQG0 1328 aaKnown RBP13.78□□□□□ -0.2
DDB1-204ENST00000535147 DEKP35659 375 aaKnown RBP13.77□□□□□ -0.21
DDB1-204ENST00000535147 LRPPRCP42704 1394 aaKnown RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms