RNA–Protein interactions for RNA: ENST00000534317.1

PDE3B-205, Transcript of phosphodiesterase 3B, humanhuman

TSL 1 (best)

Gene PDE3B, Length 5,521 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3B-205ENST00000534317 CFAP44Q96MT7 982 aa23.81■■□□□ 1.4
PDE3B-205ENST00000534317 MCCP23508 829 aa23.8■■□□□ 1.4
PDE3B-205ENST00000534317 FOXD1Q16676 465 aa23.8■■□□□ 1.4
PDE3B-205ENST00000534317 TAOK2Q9UL54 1235 aa23.8■■□□□ 1.4
PDE3B-205ENST00000534317 L1TD1Q5T7N2 865 aaKnown RBP23.8■■□□□ 1.4
PDE3B-205ENST00000534317 GOLGA6L4A6NEF3 574 aa23.79■■□□□ 1.4
PDE3B-205ENST00000534317 RAB3GAP2Q9H2M9 1393 aa23.79■■□□□ 1.4
PDE3B-205ENST00000534317 NAP1L2Q9ULW6 460 aaPredicted RBP23.79■■□□□ 1.4
PDE3B-205ENST00000534317 NRDCO43847 1150 aa23.78■■□□□ 1.4
PDE3B-205ENST00000534317 SAFB2Q14151 953 aaKnown RBP eCLIP23.78■■□□□ 1.41e-6■■□□□ 12
PDE3B-205ENST00000534317 RALBP1Q15311 655 aa23.77■■□□□ 1.4
PDE3B-205ENST00000534317 RCAN3Q9UKA8 241 aa23.77■■□□□ 1.4
PDE3B-205ENST00000534317 IPO8O15397 1037 aaKnown RBP23.76■■□□□ 1.39
PDE3B-205ENST00000534317 DEKP35659 375 aaKnown RBP23.76■■□□□ 1.39
PDE3B-205ENST00000534317 MPHOSPH9Q99550 1183 aa23.76■■□□□ 1.39
PDE3B-205ENST00000534317 SOX12O15370 315 aa23.75■■□□□ 1.39
PDE3B-205ENST00000534317 SPRYD3Q8NCJ5 442 aa23.75■■□□□ 1.39
PDE3B-205ENST00000534317 ROCK2O75116 1388 aaKnown RBP23.74■■□□□ 1.39
PDE3B-205ENST00000534317 NPHP1O15259 732 aa23.72■■□□□ 1.39
PDE3B-205ENST00000534317 HDGFL2Q7Z4V5 671 aaPredicted RBP23.72■■□□□ 1.39
PDE3B-205ENST00000534317 RTF1Q92541 710 aaKnown RBP23.72■■□□□ 1.39
PDE3B-205ENST00000534317 CCDC88BA6NC98 1476 aa23.72■■□□□ 1.39
PDE3B-205ENST00000534317 ABCC8Q09428 1581 aa23.7■■□□□ 1.38
PDE3B-205ENST00000534317 TCERG1O14776 1098 aaKnown RBP23.7■■□□□ 1.38
PDE3B-205ENST00000534317 GOLGA2Q08379 1002 aa23.7■■□□□ 1.38
PDE3B-205ENST00000534317 TULP1O00294 542 aaPredicted RBP23.69■■□□□ 1.38
PDE3B-205ENST00000534317 GGT6Q6P531 493 aa23.69■■□□□ 1.38
PDE3B-205ENST00000534317 FMN1Q68DA7 1419 aa23.69■■□□□ 1.38
PDE3B-205ENST00000534317 MSNP26038 577 aaKnown RBP23.69■■□□□ 1.38
PDE3B-205ENST00000534317 NUP155O75694 1391 aa23.69■■□□□ 1.38
PDE3B-205ENST00000534317 MLECQ14165 292 aa23.68■■□□□ 1.38
PDE3B-205ENST00000534317 RWDD1Q9H446 243 aaPredicted RBP23.68■■□□□ 1.38
PDE3B-205ENST00000534317 STK26Q9P289 416 aa23.68■■□□□ 1.38
PDE3B-205ENST00000534317 U2AF1L5P0DN76 240 aaPredicted RBP23.68■■□□□ 1.38
PDE3B-205ENST00000534317 U2AF1Q01081 240 aaKnown RBP eCLIP23.68■■□□□ 1.38
PDE3B-205ENST00000534317 CHAF1AQ13111 956 aaPredicted RBP23.67■■□□□ 1.38
PDE3B-205ENST00000534317 CALD1Q05682 793 aaKnown RBP23.67■■□□□ 1.38
PDE3B-205ENST00000534317 CARMIL2Q6F5E8 1435 aa23.66■■□□□ 1.38
PDE3B-205ENST00000534317 ANKRD30AQ9BXX3 1397 aa23.65■■□□□ 1.38
PDE3B-205ENST00000534317 MROH2BQ7Z745 1585 aa23.63■■□□□ 1.37
PDE3B-205ENST00000534317 ITPRIPQ8IWB1 547 aa23.63■■□□□ 1.37
PDE3B-205ENST00000534317 APBB1O00213 710 aa23.63■■□□□ 1.37
PDE3B-205ENST00000534317 GBP4Q96PP9 640 aa23.62■■□□□ 1.37
PDE3B-205ENST00000534317 PTMSP20962 102 aa23.6■■□□□ 1.37
PDE3B-205ENST00000534317 KIAA1211Q6ZU35 1233 aa23.6■■□□□ 1.37
PDE3B-205ENST00000534317 PMFBP1Q8TBY8 1022 aa23.58■■□□□ 1.37
PDE3B-205ENST00000534317 EIF3AQ14152 1382 aaKnown RBP23.58■■□□□ 1.36
PDE3B-205ENST00000534317 EFCAB2Q5VUJ9 269 aa23.58■■□□□ 1.36
PDE3B-205ENST00000534317 DRC7Q8IY82 874 aa23.58■■□□□ 1.36
PDE3B-205ENST00000534317 L3MBTL2Q969R5 705 aa23.57■■□□□ 1.36
PDE3B-205ENST00000534317 SLKQ9H2G2 1235 aaPredicted RBP23.55■■□□□ 1.36
PDE3B-205ENST00000534317 NLRP13Q86W25 1043 aa23.53■■□□□ 1.36
PDE3B-205ENST00000534317 TSHZ2Q9NRE2 1034 aa23.53■■□□□ 1.36
PDE3B-205ENST00000534317 TDRD9Q8NDG6 1382 aaKnown RBP23.53■■□□□ 1.36
PDE3B-205ENST00000534317 PDE3BQ13370 1112 aa23.52■■□□□ 1.36
PDE3B-205ENST00000534317 SMARCA2P51531 1590 aa23.5■■□□□ 1.35
PDE3B-205ENST00000534317 SMC4Q9NTJ3 1288 aa23.5■■□□□ 1.35
PDE3B-205ENST00000534317 GNL2Q13823 731 aaKnown RBP23.49■■□□□ 1.35
PDE3B-205ENST00000534317 IPO9Q96P70 1041 aaKnown RBP23.49■■□□□ 1.35
PDE3B-205ENST00000534317 GZF1Q9H116 711 aaPredicted RBP23.49■■□□□ 1.35
PDE3B-205ENST00000534317 PDS5BQ9NTI5 1447 aa23.49■■□□□ 1.35
PDE3B-205ENST00000534317 MFAP1P55081 439 aaKnown RBP23.47■■□□□ 1.35
PDE3B-205ENST00000534317 CHMP4AQ9BY43 222 aa23.47■■□□□ 1.35
PDE3B-205ENST00000534317 STK31Q9BXU1 1019 aa23.46■■□□□ 1.35
PDE3B-205ENST00000534317 PAK3O75914 559 aaPredicted RBP23.46■■□□□ 1.35
PDE3B-205ENST00000534317 TERF2IPQ9NYB0 399 aa23.46■■□□□ 1.35
PDE3B-205ENST00000534317 SPAG9O60271 1321 aaKnown RBP23.44■■□□□ 1.34
PDE3B-205ENST00000534317 CENPJQ9HC77 1338 aaPredicted RBP23.44■■□□□ 1.34
PDE3B-205ENST00000534317 KIF3BO15066 747 aa23.44■■□□□ 1.34
PDE3B-205ENST00000534317 CCDC146Q8IYE0 955 aa23.44■■□□□ 1.34
PDE3B-205ENST00000534317 KIAA2012Q0VF49 1180 aa23.43■■□□□ 1.34
PDE3B-205ENST00000534317 SYAP1Q96A49 352 aaPredicted RBP23.43■■□□□ 1.34
PDE3B-205ENST00000534317 HNRNPMP52272 730 aaKnown RBP eCLIP23.43■■□□□ 1.346e-7■■■■■ 32.3
PDE3B-205ENST00000534317 PHLDB1Q86UU1 1377 aa23.43■■□□□ 1.34
PDE3B-205ENST00000534317 HTATSF1O43719 755 aaKnown RBP23.43■■□□□ 1.34
PDE3B-205ENST00000534317 FHOD3Q2V2M9 1422 aa23.42■■□□□ 1.34
PDE3B-205ENST00000534317 HMMRO75330 724 aa23.42■■□□□ 1.34
PDE3B-205ENST00000534317 RSPH4AQ5TD94 716 aa23.42■■□□□ 1.34
PDE3B-205ENST00000534317 RAPGEF2Q9Y4G8 1499 aa23.42■■□□□ 1.34
PDE3B-205ENST00000534317 CLUAP1Q96AJ1 413 aa23.42■■□□□ 1.34
PDE3B-205ENST00000534317 KIF15Q9NS87 1388 aa23.4■■□□□ 1.34
PDE3B-205ENST00000534317 CCDC18Q5T9S5 1454 aa23.39■■□□□ 1.33
PDE3B-205ENST00000534317 TRHP20396 242 aaPredicted RBP23.39■■□□□ 1.33
PDE3B-205ENST00000534317 GOLGA6L3A6NEY3 463 aa23.38■■□□□ 1.33
PDE3B-205ENST00000534317 CSB-PGBD3P0DP91 1061 aa23.38■■□□□ 1.33
PDE3B-205ENST00000534317 HDAC5Q9UQL6 1122 aa23.37■■□□□ 1.33
PDE3B-205ENST00000534317 MYBBP1AQ9BQG0 1328 aaKnown RBP23.37■■□□□ 1.33
PDE3B-205ENST00000534317 TOP2AP11388 1531 aaKnown RBP23.37■■□□□ 1.33
PDE3B-205ENST00000534317 GPATCH3Q96I76 525 aa23.36■■□□□ 1.33
PDE3B-205ENST00000534317 LMOD3Q0VAK6 560 aa23.36■■□□□ 1.33
PDE3B-205ENST00000534317 TRIM6-TRIM34B2RNG4 842 aa23.36■■□□□ 1.33
PDE3B-205ENST00000534317 ISY1Q9ULR0 285 aaKnown RBP23.35■■□□□ 1.33
PDE3B-205ENST00000534317 DHX57Q6P158 1386 aaKnown RBP23.34■■□□□ 1.33
PDE3B-205ENST00000534317 ZNF330Q9Y3S2 320 aaPredicted RBP23.34■■□□□ 1.33
PDE3B-205ENST00000534317 SLC4A10Q6U841 1118 aa23.32■■□□□ 1.32
PDE3B-205ENST00000534317 ST20-MTHFSA0A0A6YYL1 179 aa23.31■■□□□ 1.32
PDE3B-205ENST00000534317 GORABQ5T7V8 394 aa23.3■■□□□ 1.32
PDE3B-205ENST00000534317 WASHC2CQ9Y4E1 1318 aa23.29■■□□□ 1.32
PDE3B-205ENST00000534317 PANK3Q9H999 370 aa23.28■■□□□ 1.32
PDE3B-205ENST00000534317 CLSTN1O94985 981 aa23.28■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms