RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 P3H3Q8IVL6 736 aa21.15■□□□□ 0.98
KNL1-212ENST00000534204 IQSEC2Q5JU85 1478 aa21.13■□□□□ 0.97
KNL1-212ENST00000534204 PTPRTO14522 1441 aa21.12■□□□□ 0.97
KNL1-212ENST00000534204 SETD1BQ9UPS6 1966 aaKnown RBP21.12■□□□□ 0.97
KNL1-212ENST00000534204 MLECQ14165 292 aa21.12■□□□□ 0.97
KNL1-212ENST00000534204 CEBPAP49715 358 aaPredicted RBP21.11■□□□□ 0.97
KNL1-212ENST00000534204 C3P01024 1663 aa21.09■□□□□ 0.97
KNL1-212ENST00000534204 ATP10AO60312 1499 aa21.07■□□□□ 0.96
KNL1-212ENST00000534204 C9orf84Q5VXU9 1444 aa21.07■□□□□ 0.96
KNL1-212ENST00000534204 UHRF1BP1Q6BDS2 1440 aa21.07■□□□□ 0.96
KNL1-212ENST00000534204 DMRT2Q9Y5R5 561 aa21.07■□□□□ 0.96
KNL1-212ENST00000534204 SCAPERQ9BY12 1400 aa21.02■□□□□ 0.96
KNL1-212ENST00000534204 KDM5CP41229 1560 aa20.99■□□□□ 0.95
KNL1-212ENST00000534204 NCOA1Q15788 1441 aa20.99■□□□□ 0.95
KNL1-212ENST00000534204 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.99■□□□□ 0.95
KNL1-212ENST00000534204 HNRNPUL2Q1KMD3 747 aaKnown RBP20.99■□□□□ 0.95
KNL1-212ENST00000534204 REREQ9P2R6 1566 aa20.98■□□□□ 0.95
KNL1-212ENST00000534204 DIP2CQ9Y2E4 1556 aa20.98■□□□□ 0.95
KNL1-212ENST00000534204 PLCH2O75038 1416 aa20.96■□□□□ 0.95
KNL1-212ENST00000534204 MYO5CQ9NQX4 1742 aa20.96■□□□□ 0.95
KNL1-212ENST00000534204 ABCA6Q8N139 1617 aa20.94■□□□□ 0.94
KNL1-212ENST00000534204 PLEKHD1A6NEE1 506 aa20.94■□□□□ 0.94
KNL1-212ENST00000534204 CDK13Q14004 1512 aaKnown RBP20.94■□□□□ 0.94
KNL1-212ENST00000534204 MED1Q15648 1581 aaPredicted RBP20.93■□□□□ 0.94
KNL1-212ENST00000534204 FAM9AQ8IZU1 332 aaPredicted RBP20.92■□□□□ 0.94
KNL1-212ENST00000534204 CAMSAP1Q5T5Y3 1602 aa20.89■□□□□ 0.93
KNL1-212ENST00000534204 ZNF518AQ6AHZ1 1483 aa20.88■□□□□ 0.93
KNL1-212ENST00000534204 KIF14Q15058 1648 aa20.87■□□□□ 0.93
KNL1-212ENST00000534204 AGLP35573 1532 aa20.87■□□□□ 0.93
KNL1-212ENST00000534204 TRAPPC8Q9Y2L5 1435 aa20.87■□□□□ 0.93
KNL1-212ENST00000534204 ZNF142P52746 1687 aaPredicted RBP20.83■□□□□ 0.93
KNL1-212ENST00000534204 MROH2AA6NES4 1674 aa20.83■□□□□ 0.92
KNL1-212ENST00000534204 ZNF335Q9H4Z2 1342 aaPredicted RBP20.82■□□□□ 0.92
KNL1-212ENST00000534204 CDC42BPBQ9Y5S2 1711 aa20.8■□□□□ 0.92
KNL1-212ENST00000534204 UBAP1LF5GYI3 381 aa20.79■□□□□ 0.92
KNL1-212ENST00000534204 MLH3Q9UHC1 1453 aa20.79■□□□□ 0.92
KNL1-212ENST00000534204 KIDINS220Q9ULH0 1771 aa20.79■□□□□ 0.92
KNL1-212ENST00000534204 AFAP1Q8N556 730 aa20.78■□□□□ 0.92
KNL1-212ENST00000534204 MYO3AQ8NEV4 1616 aa20.78■□□□□ 0.92
KNL1-212ENST00000534204 SUPT6HQ7KZ85 1726 aaKnown RBP20.76■□□□□ 0.91
KNL1-212ENST00000534204 ITSN2Q9NZM3 1697 aa20.76■□□□□ 0.91
KNL1-212ENST00000534204 TCOF1Q13428 1488 aaKnown RBP20.75■□□□□ 0.91
KNL1-212ENST00000534204 NPATQ14207 1427 aa20.75■□□□□ 0.91
KNL1-212ENST00000534204 LRRIQ1Q96JM4 1722 aa20.75■□□□□ 0.91
KNL1-212ENST00000534204 EFCAB2Q5VUJ9 269 aa20.74■□□□□ 0.91
KNL1-212ENST00000534204 PLA2R1Q13018 1463 aa20.74■□□□□ 0.91
KNL1-212ENST00000534204 NCKAP5LQ9HCH0 1330 aa20.73■□□□□ 0.91
KNL1-212ENST00000534204 ABCC1P33527 1531 aa20.73■□□□□ 0.91
KNL1-212ENST00000534204 ARHGAP5Q13017 1502 aa20.73■□□□□ 0.91
KNL1-212ENST00000534204 CNTLNQ9NXG0 1405 aa20.72■□□□□ 0.91
KNL1-212ENST00000534204 ALKQ9UM73 1620 aa20.72■□□□□ 0.91
KNL1-212ENST00000534204 HSPA1LP34931 641 aa20.71■□□□□ 0.91
KNL1-212ENST00000534204 CEP170BQ9Y4F5 1589 aaPredicted RBP20.7■□□□□ 0.9
KNL1-212ENST00000534204 PREX2Q70Z35 1606 aa20.69■□□□□ 0.9
KNL1-212ENST00000534204 RANGAP1P46060 587 aaPredicted RBP20.69■□□□□ 0.9
KNL1-212ENST00000534204 CLTCQ00610 1675 aaKnown RBP20.67■□□□□ 0.9
KNL1-212ENST00000534204 CSRNP3Q8WYN3 585 aa20.67■□□□□ 0.9
KNL1-212ENST00000534204 NEURL4Q96JN8 1562 aa20.63■□□□□ 0.89
KNL1-212ENST00000534204 TROQ12816 1431 aaPredicted RBP20.63■□□□□ 0.89
KNL1-212ENST00000534204 ZMYM3Q14202 1370 aa20.62■□□□□ 0.89
KNL1-212ENST00000534204 POLR1AO95602 1720 aaPredicted RBP20.62■□□□□ 0.89
KNL1-212ENST00000534204 PTPRKQ15262 1439 aa20.61■□□□□ 0.89
KNL1-212ENST00000534204 PLXNC1O60486 1568 aa20.6■□□□□ 0.89
KNL1-212ENST00000534204 PKD2Q13563 968 aa20.6■□□□□ 0.89
KNL1-212ENST00000534204 CDC42BPAQ5VT25 1732 aa20.6■□□□□ 0.89
KNL1-212ENST00000534204 SAMD9LQ8IVG5 1584 aa20.59■□□□□ 0.89
KNL1-212ENST00000534204 DNMT1P26358 1616 aaKnown RBP20.59■□□□□ 0.89
KNL1-212ENST00000534204 CPS1P31327 1500 aa20.58■□□□□ 0.88
KNL1-212ENST00000534204 ESF1Q9H501 851 aaKnown RBP20.56■□□□□ 0.88
KNL1-212ENST00000534204 VWDEQ8N2E2 1590 aa20.55■□□□□ 0.88
KNL1-212ENST00000534204 PIP4K2BP78356 416 aa20.54■□□□□ 0.88
KNL1-212ENST00000534204 MYT1LQ9UL68 1186 aa20.54■□□□□ 0.88
KNL1-212ENST00000534204 PPP6R1Q9UPN7 881 aa20.53■□□□□ 0.88
KNL1-212ENST00000534204 SHANK2Q9UPX8 1470 aa20.52■□□□□ 0.88
KNL1-212ENST00000534204 INO80Q9ULG1 1556 aaPredicted RBP20.51■□□□□ 0.87
KNL1-212ENST00000534204 ARHGAP35Q9NRY4 1499 aa20.51■□□□□ 0.87
KNL1-212ENST00000534204 STRCP1A6NGW2 1772 aa20.51■□□□□ 0.87
KNL1-212ENST00000534204 FMN1Q68DA7 1419 aa20.51■□□□□ 0.87
KNL1-212ENST00000534204 A2ML1A8K2U0 1454 aa20.5■□□□□ 0.87
KNL1-212ENST00000534204 SCAF1Q9H7N4 1312 aaKnown RBP20.5■□□□□ 0.87
KNL1-212ENST00000534204 CLIP1P30622 1438 aa20.49■□□□□ 0.87
KNL1-212ENST00000534204 RGS17Q9UGC6 210 aaPredicted RBP20.48■□□□□ 0.87
KNL1-212ENST00000534204 EEA1Q15075 1411 aa20.47■□□□□ 0.87
KNL1-212ENST00000534204 ATP7AQ04656 1500 aa20.47■□□□□ 0.87
KNL1-212ENST00000534204 SYCP2Q9BX26 1530 aa20.47■□□□□ 0.87
KNL1-212ENST00000534204 TOM1O60784 492 aa20.46■□□□□ 0.87
KNL1-212ENST00000534204 PHF23Q9BUL5 403 aaPredicted RBP20.46■□□□□ 0.87
KNL1-212ENST00000534204 CDK11AQ9UQ88 783 aaPredicted RBP20.44■□□□□ 0.86
KNL1-212ENST00000534204 SENP3Q9H4L4 574 aaPredicted RBP20.43■□□□□ 0.86
KNL1-212ENST00000534204 A2MP01023 1474 aa20.41■□□□□ 0.86
KNL1-212ENST00000534204 RNF17Q9BXT8 1623 aaKnown RBP20.4■□□□□ 0.86
KNL1-212ENST00000534204 ADGBQ8N7X0 1667 aa20.39■□□□□ 0.86
KNL1-212ENST00000534204 DEPDC5O75140 1603 aa20.39■□□□□ 0.86
KNL1-212ENST00000534204 ATP1B4Q9UN42 357 aaPredicted RBP20.39■□□□□ 0.85
KNL1-212ENST00000534204 MED14O60244 1454 aa20.37■□□□□ 0.85
KNL1-212ENST00000534204 SYNMO15061 1565 aa20.36■□□□□ 0.85
KNL1-212ENST00000534204 LRRC7Q96NW7 1537 aa20.36■□□□□ 0.85
KNL1-212ENST00000534204 SETD1AO15047 1707 aaKnown RBP20.36■□□□□ 0.85
KNL1-212ENST00000534204 IQGAP1P46940 1657 aa20.35■□□□□ 0.85
KNL1-212ENST00000534204 XIRP1Q702N8 1843 aaKnown RBP20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms