RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 EFCAB2Q5VUJ9 269 aa27.73■■■□□ 2.03
CAPRIN1-216ENST00000534042 RIMS1Q86UR5 1692 aaKnown RBP27.72■■■□□ 2.03
CAPRIN1-216ENST00000534042 MYO5CQ9NQX4 1742 aa27.72■■■□□ 2.03
CAPRIN1-216ENST00000534042 TROQ12816 1431 aaPredicted RBP27.68■■■□□ 2.02
CAPRIN1-216ENST00000534042 KIF14Q15058 1648 aa27.67■■■□□ 2.02
CAPRIN1-216ENST00000534042 PCF11O94913 1555 aaKnown RBP27.66■■■□□ 2.02
CAPRIN1-216ENST00000534042 CLIP1P30622 1438 aa27.66■■■□□ 2.02
CAPRIN1-216ENST00000534042 SIGLEC1Q9BZZ2 1709 aa27.64■■■□□ 2.02
CAPRIN1-216ENST00000534042 MLECQ14165 292 aa27.64■■■□□ 2.02
CAPRIN1-216ENST00000534042 PLPPR3Q6T4P5 718 aa27.63■■■□□ 2.01
CAPRIN1-216ENST00000534042 LMTK3Q96Q04 1460 aa27.63■■■□□ 2.01
CAPRIN1-216ENST00000534042 LRRIQ1Q96JM4 1722 aa27.62■■■□□ 2.01
CAPRIN1-216ENST00000534042 ATP10AO60312 1499 aa27.61■■■□□ 2.01
CAPRIN1-216ENST00000534042 ARHGAP5Q13017 1502 aa27.61■■■□□ 2.01
CAPRIN1-216ENST00000534042 C9orf84Q5VXU9 1444 aa27.57■■■□□ 2
CAPRIN1-216ENST00000534042 ZNF518AQ6AHZ1 1483 aa27.57■■■□□ 2
CAPRIN1-216ENST00000534042 FER1L4A9Z1Z3 1794 aa27.56■■■□□ 2
CAPRIN1-216ENST00000534042 CASKIN1Q8WXD9 1431 aa27.56■■■□□ 2
CAPRIN1-216ENST00000534042 AFAP1Q8N556 730 aa27.55■■■□□ 2
CAPRIN1-216ENST00000534042 CCDC18Q5T9S5 1454 aa27.54■■■□□ 2
CAPRIN1-216ENST00000534042 MYT1LQ9UL68 1186 aa27.53■■■□□ 2
CAPRIN1-216ENST00000534042 HSPA2P54652 639 aa27.52■■■□□ 2
CAPRIN1-216ENST00000534042 CDC42BPBQ9Y5S2 1711 aa27.51■■□□□ 1.99
CAPRIN1-216ENST00000534042 FBXO41Q8TF61 875 aa27.51■■□□□ 1.99
CAPRIN1-216ENST00000534042 KDM5CP41229 1560 aa27.5■■□□□ 1.99
CAPRIN1-216ENST00000534042 ARHGEF12Q9NZN5 1544 aa27.5■■□□□ 1.99
CAPRIN1-216ENST00000534042 PREX2Q70Z35 1606 aa27.45■■□□□ 1.99
CAPRIN1-216ENST00000534042 FYCO1Q9BQS8 1478 aa27.43■■□□□ 1.98
CAPRIN1-216ENST00000534042 DIP2CQ9Y2E4 1556 aa27.41■■□□□ 1.98
CAPRIN1-216ENST00000534042 MLH3Q9UHC1 1453 aa27.41■■□□□ 1.98
CAPRIN1-216ENST00000534042 CEBPAP49715 358 aaPredicted RBP27.4■■□□□ 1.98
CAPRIN1-216ENST00000534042 ABCC1P33527 1531 aa27.4■■□□□ 1.98
CAPRIN1-216ENST00000534042 TRAPPC8Q9Y2L5 1435 aa27.4■■□□□ 1.98
CAPRIN1-216ENST00000534042 CDC42BPAQ5VT25 1732 aa27.38■■□□□ 1.97
CAPRIN1-216ENST00000534042 ITSN2Q9NZM3 1697 aa27.37■■□□□ 1.97
CAPRIN1-216ENST00000534042 REREQ9P2R6 1566 aa27.37■■□□□ 1.97
CAPRIN1-216ENST00000534042 ABCA6Q8N139 1617 aa27.37■■□□□ 1.97
CAPRIN1-216ENST00000534042 SETD1BQ9UPS6 1966 aaKnown RBP27.35■■□□□ 1.97
CAPRIN1-216ENST00000534042 PREX1Q8TCU6 1659 aa27.34■■□□□ 1.97
CAPRIN1-216ENST00000534042 ZNF777Q9ULD5 760 aaPredicted RBP27.33■■□□□ 1.97
CAPRIN1-216ENST00000534042 AGLP35573 1532 aa27.31■■□□□ 1.96
CAPRIN1-216ENST00000534042 ESF1Q9H501 851 aaKnown RBP27.3■■□□□ 1.96
CAPRIN1-216ENST00000534042 KIDINS220Q9ULH0 1771 aa27.3■■□□□ 1.96
CAPRIN1-216ENST00000534042 GPATCH8Q9UKJ3 1502 aaKnown RBP27.27■■□□□ 1.96
CAPRIN1-216ENST00000534042 UHRF1BP1Q6BDS2 1440 aa27.25■■□□□ 1.95
CAPRIN1-216ENST00000534042 SAMD9LQ8IVG5 1584 aa27.25■■□□□ 1.95
CAPRIN1-216ENST00000534042 SYCP2Q9BX26 1530 aa27.23■■□□□ 1.95
CAPRIN1-216ENST00000534042 HNRNPMP52272 730 aaKnown RBP eCLIP27.23■■□□□ 1.95
CAPRIN1-216ENST00000534042 C3P01024 1663 aa27.23■■□□□ 1.95
CAPRIN1-216ENST00000534042 SPAG9O60271 1321 aaKnown RBP27.22■■□□□ 1.95
CAPRIN1-216ENST00000534042 CERKQ8TCT0 537 aa27.22■■□□□ 1.95
CAPRIN1-216ENST00000534042 CFDP1Q9UEE9 299 aaPredicted RBP27.22■■□□□ 1.95
CAPRIN1-216ENST00000534042 CCNB3Q8WWL7 1395 aa27.22■■□□□ 1.95
CAPRIN1-216ENST00000534042 MTUS2Q5JR59 1369 aa27.21■■□□□ 1.95
CAPRIN1-216ENST00000534042 DMRT2Q9Y5R5 561 aa27.19■■□□□ 1.94
CAPRIN1-216ENST00000534042 PLEKHH2Q8IVE3 1493 aa27.19■■□□□ 1.94
CAPRIN1-216ENST00000534042 CNTLNQ9NXG0 1405 aa27.18■■□□□ 1.94
CAPRIN1-216ENST00000534042 KIAA1107Q9UPP5 1409 aa27.18■■□□□ 1.94
CAPRIN1-216ENST00000534042 STRCQ7RTU9 1775 aa27.16■■□□□ 1.94
CAPRIN1-216ENST00000534042 ATP7AQ04656 1500 aa27.13■■□□□ 1.93
CAPRIN1-216ENST00000534042 SUPT6HQ7KZ85 1726 aaKnown RBP27.12■■□□□ 1.93
CAPRIN1-216ENST00000534042 INO80Q9ULG1 1556 aaPredicted RBP27.08■■□□□ 1.93
CAPRIN1-216ENST00000534042 A2MP01023 1474 aa27.07■■□□□ 1.92
CAPRIN1-216ENST00000534042 EHBP1L1Q8N3D4 1523 aa27.07■■□□□ 1.92
CAPRIN1-216ENST00000534042 MROH2AA6NES4 1674 aa27.07■■□□□ 1.92
CAPRIN1-216ENST00000534042 ZMYM3Q14202 1370 aa27.06■■□□□ 1.92
CAPRIN1-216ENST00000534042 CEP162Q5TB80 1403 aa27.06■■□□□ 1.92
CAPRIN1-216ENST00000534042 TIAM1Q13009 1591 aa27.05■■□□□ 1.92
CAPRIN1-216ENST00000534042 ZNF644Q9H582 1327 aaPredicted RBP27.05■■□□□ 1.92
CAPRIN1-216ENST00000534042 PTPRTO14522 1441 aa27.04■■□□□ 1.92
CAPRIN1-216ENST00000534042 NPATQ14207 1427 aa27.04■■□□□ 1.92
CAPRIN1-216ENST00000534042 PLXNC1O60486 1568 aa27.03■■□□□ 1.92
CAPRIN1-216ENST00000534042 GGT6Q6P531 493 aa27.01■■□□□ 1.91
CAPRIN1-216ENST00000534042 CLTCQ00610 1675 aaKnown RBP26.99■■□□□ 1.91
CAPRIN1-216ENST00000534042 ADGBQ8N7X0 1667 aa26.99■■□□□ 1.91
CAPRIN1-216ENST00000534042 MBD5Q9P267 1494 aa26.98■■□□□ 1.91
CAPRIN1-216ENST00000534042 NCOA1Q15788 1441 aa26.98■■□□□ 1.91
CAPRIN1-216ENST00000534042 PPP6R1Q9UPN7 881 aa26.96■■□□□ 1.91
CAPRIN1-216ENST00000534042 RTEL1-TNFRSF6BF6WH68 1400 aa26.94■■□□□ 1.9
CAPRIN1-216ENST00000534042 CAMSAP1Q5T5Y3 1602 aa26.93■■□□□ 1.9
CAPRIN1-216ENST00000534042 NCOA2Q15596 1464 aa26.92■■□□□ 1.9
CAPRIN1-216ENST00000534042 PTPRKQ15262 1439 aa26.9■■□□□ 1.9
CAPRIN1-216ENST00000534042 DHX29Q7Z478 1369 aaKnown RBP26.89■■□□□ 1.9
CAPRIN1-216ENST00000534042 RSPH4AQ5TD94 716 aa26.88■■□□□ 1.89
CAPRIN1-216ENST00000534042 CCDC141Q6ZP82 1450 aa26.87■■□□□ 1.89
CAPRIN1-216ENST00000534042 MYO3AQ8NEV4 1616 aa26.87■■□□□ 1.89
CAPRIN1-216ENST00000534042 LTBP4Q8N2S1 1624 aa26.86■■□□□ 1.89
CAPRIN1-216ENST00000534042 CAMSAP2Q08AD1 1489 aa26.86■■□□□ 1.89
CAPRIN1-216ENST00000534042 NCKAP5LQ9HCH0 1330 aa26.86■■□□□ 1.89
CAPRIN1-216ENST00000534042 ZNF142P52746 1687 aaPredicted RBP26.85■■□□□ 1.89
CAPRIN1-216ENST00000534042 KIF3BO15066 747 aa26.84■■□□□ 1.89
CAPRIN1-216ENST00000534042 CEP170BQ9Y4F5 1589 aaPredicted RBP26.84■■□□□ 1.89
CAPRIN1-216ENST00000534042 PKD2Q13563 968 aa26.82■■□□□ 1.88
CAPRIN1-216ENST00000534042 PLA2R1Q13018 1463 aa26.81■■□□□ 1.88
CAPRIN1-216ENST00000534042 LOC105371045A0A1W2PR82 267 aa26.8■■□□□ 1.88
CAPRIN1-216ENST00000534042 VPS8Q8N3P4 1428 aa26.79■■□□□ 1.88
CAPRIN1-216ENST00000534042 TSPY4P0CV99 314 aa26.78■■□□□ 1.88
CAPRIN1-216ENST00000534042 TSPY10P0CW01 314 aa26.78■■□□□ 1.88
CAPRIN1-216ENST00000534042 IQSEC2Q5JU85 1478 aa26.78■■□□□ 1.88
CAPRIN1-216ENST00000534042 ARHGEF5Q12774 1597 aa26.76■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms