RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 CDK11AQ9UQ88 783 aaPredicted RBP26.59■■□□□ 1.85
CAPN1-226ENST00000533820 ARHGEF11O15085 1522 aa26.59■■□□□ 1.85
CAPN1-226ENST00000533820 ZNF777Q9ULD5 760 aaPredicted RBP26.57■■□□□ 1.84
CAPN1-226ENST00000533820 CNTLNQ9NXG0 1405 aa26.57■■□□□ 1.84
CAPN1-226ENST00000533820 CCDC7Q96M83 1385 aa26.56■■□□□ 1.84
CAPN1-226ENST00000533820 KIF21AQ7Z4S6 1674 aa26.56■■□□□ 1.84
CAPN1-226ENST00000533820 CCDC136Q96JN2 1154 aa26.56■■□□□ 1.84
CAPN1-226ENST00000533820 TCOF1Q13428 1488 aaKnown RBP26.55■■□□□ 1.84
CAPN1-226ENST00000533820 MSH5O43196 834 aa26.55■■□□□ 1.84
CAPN1-226ENST00000533820 HECW1Q76N89 1606 aa26.54■■□□□ 1.84
CAPN1-226ENST00000533820 B4GALNT3Q6L9W6 998 aa26.52■■□□□ 1.84
CAPN1-226ENST00000533820 IQGAP2Q13576 1575 aa26.52■■□□□ 1.84
CAPN1-226ENST00000533820 SALL2Q9Y467 1007 aaPredicted RBP26.52■■□□□ 1.84
CAPN1-226ENST00000533820 KIF7Q2M1P5 1343 aa26.5■■□□□ 1.83
CAPN1-226ENST00000533820 GCC2Q8IWJ2 1684 aa26.5■■□□□ 1.83
CAPN1-226ENST00000533820 TARBP1Q13395 1621 aaKnown RBP26.49■■□□□ 1.83
CAPN1-226ENST00000533820 ANKRD30BQ9BXX2 1392 aa26.48■■□□□ 1.83
CAPN1-226ENST00000533820 MIA2Q96PC5 1412 aa26.47■■□□□ 1.83
CAPN1-226ENST00000533820 DAPK1P53355 1430 aa26.46■■□□□ 1.83
CAPN1-226ENST00000533820 NCOA1Q15788 1441 aa26.46■■□□□ 1.83
CAPN1-226ENST00000533820 ABCC5O15440 1437 aa26.44■■□□□ 1.82
CAPN1-226ENST00000533820 PPP4R2Q9NY27 417 aa26.42■■□□□ 1.82
CAPN1-226ENST00000533820 WDR62O43379 1518 aa26.42■■□□□ 1.82
CAPN1-226ENST00000533820 AKNAQ7Z591 1439 aa26.41■■□□□ 1.82
CAPN1-226ENST00000533820 CFDP1Q9UEE9 299 aaPredicted RBP26.41■■□□□ 1.82
CAPN1-226ENST00000533820 FBLN2P98095 1184 aa26.41■■□□□ 1.82
CAPN1-226ENST00000533820 DEKP35659 375 aaKnown RBP26.4■■□□□ 1.82
CAPN1-226ENST00000533820 RPRD2Q5VT52 1461 aaKnown RBP26.39■■□□□ 1.82
CAPN1-226ENST00000533820 PBRM1Q86U86 1689 aa26.39■■□□□ 1.81
CAPN1-226ENST00000533820 ZNF608Q9ULD9 1512 aaPredicted RBP26.39■■□□□ 1.81
CAPN1-226ENST00000533820 PRG4Q92954 1404 aaPredicted RBP26.35■■□□□ 1.81
CAPN1-226ENST00000533820 ZBED9Q6R2W3 1325 aa26.35■■□□□ 1.81
CAPN1-226ENST00000533820 TEX14Q8IWB6 1497 aa26.35■■□□□ 1.81
CAPN1-226ENST00000533820 PKD2Q13563 968 aa26.35■■□□□ 1.81
CAPN1-226ENST00000533820 ADAMTS12P58397 1594 aa26.35■■□□□ 1.81
CAPN1-226ENST00000533820 NUP153P49790 1475 aaKnown RBP26.31■■□□□ 1.8
CAPN1-226ENST00000533820 KDM2AQ9Y2K7 1162 aa26.31■■□□□ 1.8
CAPN1-226ENST00000533820 ROCK1Q13464 1354 aa26.31■■□□□ 1.8
CAPN1-226ENST00000533820 SPATA31E1Q6ZUB1 1445 aa26.28■■□□□ 1.8
CAPN1-226ENST00000533820 DISP1Q96F81 1524 aa26.26■■□□□ 1.79
CAPN1-226ENST00000533820 USP47Q96K76 1375 aa26.26■■□□□ 1.79
CAPN1-226ENST00000533820 FANCIQ9NVI1 1328 aa26.25■■□□□ 1.79
CAPN1-226ENST00000533820 DNMT1P26358 1616 aaKnown RBP26.24■■□□□ 1.79
CAPN1-226ENST00000533820 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.23■■□□□ 1.79
CAPN1-226ENST00000533820 PZPP20742 1482 aa26.22■■□□□ 1.79
CAPN1-226ENST00000533820 CHMP7Q8WUX9 453 aaPredicted RBP26.22■■□□□ 1.79
CAPN1-226ENST00000533820 ERICH6BQ5W0A0 696 aa26.21■■□□□ 1.79
CAPN1-226ENST00000533820 PLB1Q6P1J6 1458 aa26.21■■□□□ 1.79
CAPN1-226ENST00000533820 MRC2Q9UBG0 1479 aa26.21■■□□□ 1.79
CAPN1-226ENST00000533820 KIAA0586Q9BVV6 1533 aa26.2■■□□□ 1.78
CAPN1-226ENST00000533820 CAMSAP2Q08AD1 1489 aa26.19■■□□□ 1.78
CAPN1-226ENST00000533820 KIAA0556O60303 1618 aa26.19■■□□□ 1.78
CAPN1-226ENST00000533820 TMC1Q8TDI8 760 aa26.18■■□□□ 1.78
CAPN1-226ENST00000533820 CARD11Q9BXL7 1154 aa26.18■■□□□ 1.78
CAPN1-226ENST00000533820 DHX29Q7Z478 1369 aaKnown RBP26.17■■□□□ 1.78
CAPN1-226ENST00000533820 UBE2Q2Q8WVN8 375 aa26.15■■□□□ 1.78
CAPN1-226ENST00000533820 RAPGEF6Q8TEU7 1601 aa26.15■■□□□ 1.78
CAPN1-226ENST00000533820 TROQ12816 1431 aaPredicted RBP26.14■■□□□ 1.78
CAPN1-226ENST00000533820 NUP155O75694 1391 aa26.14■■□□□ 1.78
CAPN1-226ENST00000533820 KIAA1107Q9UPP5 1409 aa26.14■■□□□ 1.77
CAPN1-226ENST00000533820 GPATCH8Q9UKJ3 1502 aaKnown RBP26.11■■□□□ 1.77
CAPN1-226ENST00000533820 ST20-MTHFSA0A0A6YYL1 179 aa26.11■■□□□ 1.77
CAPN1-226ENST00000533820 DCAF11Q8TEB1 546 aa26.11■■□□□ 1.77
CAPN1-226ENST00000533820 RTN4Q9NQC3 1192 aaKnown RBP26.11■■□□□ 1.77
CAPN1-226ENST00000533820 NUDCQ9Y266 331 aa26.11■■□□□ 1.77
CAPN1-226ENST00000533820 BCORL1Q5H9F3 1711 aa26.1■■□□□ 1.77
CAPN1-226ENST00000533820 GRIN2AQ12879 1464 aa26.1■■□□□ 1.77
CAPN1-226ENST00000533820 ANKRD30AQ9BXX3 1397 aa26.1■■□□□ 1.77
CAPN1-226ENST00000533820 KIF14Q15058 1648 aa26.09■■□□□ 1.77
CAPN1-226ENST00000533820 ANKRD50Q9ULJ7 1429 aa26.09■■□□□ 1.77
CAPN1-226ENST00000533820 HNRNPMP52272 730 aaKnown RBP eCLIP26.08■■□□□ 1.76
CAPN1-226ENST00000533820 IFT140Q96RY7 1462 aa26.07■■□□□ 1.76
CAPN1-226ENST00000533820 PLEKHD1A6NEE1 506 aa26.07■■□□□ 1.76
CAPN1-226ENST00000533820 PNISRQ8TF01 805 aaKnown RBP26.06■■□□□ 1.76
CAPN1-226ENST00000533820 JPH4Q96JJ6 628 aa26.06■■□□□ 1.76
CAPN1-226ENST00000533820 RGL3Q3MIN7 710 aa26.04■■□□□ 1.76
CAPN1-226ENST00000533820 TSPY4P0CV99 314 aa26.04■■□□□ 1.76
CAPN1-226ENST00000533820 TSPY10P0CW01 314 aa26.04■■□□□ 1.76
CAPN1-226ENST00000533820 SMG6Q86US8 1419 aaKnown RBP26.04■■□□□ 1.76
CAPN1-226ENST00000533820 NBR1Q14596 966 aa26.01■■□□□ 1.75
CAPN1-226ENST00000533820 MBD5Q9P267 1494 aa26■■□□□ 1.75
CAPN1-226ENST00000533820 PAK3O75914 559 aaPredicted RBP25.98■■□□□ 1.75
CAPN1-226ENST00000533820 MYT1LQ9UL68 1186 aa25.97■■□□□ 1.75
CAPN1-226ENST00000533820 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.97■■□□□ 1.754e-6■■□□□ 13.3
CAPN1-226ENST00000533820 POLR1AO95602 1720 aaPredicted RBP25.95■■□□□ 1.75
CAPN1-226ENST00000533820 EIF4G3O43432 1585 aaKnown RBP25.95■■□□□ 1.75
CAPN1-226ENST00000533820 IL27Q8NEV9 243 aa25.95■■□□□ 1.75
CAPN1-226ENST00000533820 C9orf84Q5VXU9 1444 aa25.94■■□□□ 1.74
CAPN1-226ENST00000533820 KDM5CP41229 1560 aa25.93■■□□□ 1.74
CAPN1-226ENST00000533820 NOP58Q9Y2X3 529 aaKnown RBP25.91■■□□□ 1.74
CAPN1-226ENST00000533820 ROCK2O75116 1388 aaKnown RBP25.91■■□□□ 1.74
CAPN1-226ENST00000533820 CARMIL2Q6F5E8 1435 aa25.91■■□□□ 1.74
CAPN1-226ENST00000533820 KIF15Q9NS87 1388 aa25.91■■□□□ 1.74
CAPN1-226ENST00000533820 ITSN2Q9NZM3 1697 aa25.9■■□□□ 1.74
CAPN1-226ENST00000533820 CEP170Q5SW79 1584 aa25.9■■□□□ 1.74
CAPN1-226ENST00000533820 ADGBQ8N7X0 1667 aa25.9■■□□□ 1.74
CAPN1-226ENST00000533820 NBPF1Q3BBV0 1214 aa25.9■■□□□ 1.74
CAPN1-226ENST00000533820 ADGRL2O95490 1459 aa25.9■■□□□ 1.74
CAPN1-226ENST00000533820 ERCC6Q03468 1493 aa25.9■■□□□ 1.74
CAPN1-226ENST00000533820 MYBBP1AQ9BQG0 1328 aaKnown RBP25.87■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms