RNA–Protein interactions for RNA: ENST00000532632.1

TM9SF1-212, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-212ENST00000532632 ZFYVE16Q7Z3T8 1539 aa24.03■■□□□ 1.44
TM9SF1-212ENST00000532632 ADAMTSL3P82987 1691 aa24.02■■□□□ 1.44
TM9SF1-212ENST00000532632 LRRIQ1Q96JM4 1722 aa24.01■■□□□ 1.43
TM9SF1-212ENST00000532632 MAGI2Q86UL8 1455 aa24.01■■□□□ 1.43
TM9SF1-212ENST00000532632 FYCO1Q9BQS8 1478 aa24.01■■□□□ 1.43
TM9SF1-212ENST00000532632 ARHGAP5Q13017 1502 aa24.01■■□□□ 1.43
TM9SF1-212ENST00000532632 YEATS2Q9ULM3 1422 aa24■■□□□ 1.43
TM9SF1-212ENST00000532632 PTPRMP28827 1452 aa24■■□□□ 1.43
TM9SF1-212ENST00000532632 BCORL1Q5H9F3 1711 aa23.99■■□□□ 1.43
TM9SF1-212ENST00000532632 MADDQ8WXG6 1647 aa23.95■■□□□ 1.43
TM9SF1-212ENST00000532632 ZNF518AQ6AHZ1 1483 aa23.93■■□□□ 1.42
TM9SF1-212ENST00000532632 PREX2Q70Z35 1606 aa23.88■■□□□ 1.41
TM9SF1-212ENST00000532632 ATP10AO60312 1499 aa23.87■■□□□ 1.41
TM9SF1-212ENST00000532632 C9orf84Q5VXU9 1444 aa23.87■■□□□ 1.41
TM9SF1-212ENST00000532632 MLECQ14165 292 aa23.87■■□□□ 1.41
TM9SF1-212ENST00000532632 MYT1LQ9UL68 1186 aa23.87■■□□□ 1.41
TM9SF1-212ENST00000532632 RIMS1Q86UR5 1692 aaKnown RBP23.86■■□□□ 1.41
TM9SF1-212ENST00000532632 AFAP1Q8N556 730 aa23.86■■□□□ 1.41
TM9SF1-212ENST00000532632 CDC42BPBQ9Y5S2 1711 aa23.85■■□□□ 1.41
TM9SF1-212ENST00000532632 KDM5CP41229 1560 aa23.85■■□□□ 1.41
TM9SF1-212ENST00000532632 SIGLEC1Q9BZZ2 1709 aa23.84■■□□□ 1.41
TM9SF1-212ENST00000532632 ABCC1P33527 1531 aa23.83■■□□□ 1.41
TM9SF1-212ENST00000532632 CEP162Q5TB80 1403 aa23.83■■□□□ 1.4
TM9SF1-212ENST00000532632 PLPPR3Q6T4P5 718 aa23.81■■□□□ 1.4
TM9SF1-212ENST00000532632 MTUS2Q5JR59 1369 aa23.8■■□□□ 1.4
TM9SF1-212ENST00000532632 TRAPPC8Q9Y2L5 1435 aa23.79■■□□□ 1.4
TM9SF1-212ENST00000532632 CDC42BPAQ5VT25 1732 aa23.79■■□□□ 1.4
TM9SF1-212ENST00000532632 ZNF777Q9ULD5 760 aaPredicted RBP23.78■■□□□ 1.4
TM9SF1-212ENST00000532632 ARHGEF12Q9NZN5 1544 aa23.78■■□□□ 1.4
TM9SF1-212ENST00000532632 MLH3Q9UHC1 1453 aa23.77■■□□□ 1.4
TM9SF1-212ENST00000532632 ITSN2Q9NZM3 1697 aa23.76■■□□□ 1.39
TM9SF1-212ENST00000532632 GPATCH8Q9UKJ3 1502 aaKnown RBP23.75■■□□□ 1.39
TM9SF1-212ENST00000532632 DIP2CQ9Y2E4 1556 aa23.75■■□□□ 1.39
TM9SF1-212ENST00000532632 CCNB3Q8WWL7 1395 aa23.75■■□□□ 1.39
TM9SF1-212ENST00000532632 FER1L4A9Z1Z3 1794 aa23.75■■□□□ 1.39
TM9SF1-212ENST00000532632 ILDR1Q86SU0 546 aaPredicted RBP23.74■■□□□ 1.39
TM9SF1-212ENST00000532632 LMTK3Q96Q04 1460 aa23.73■■□□□ 1.39
TM9SF1-212ENST00000532632 CFDP1Q9UEE9 299 aaPredicted RBP23.72■■□□□ 1.39
TM9SF1-212ENST00000532632 ABCA6Q8N139 1617 aa23.72■■□□□ 1.39
TM9SF1-212ENST00000532632 REREQ9P2R6 1566 aa23.71■■□□□ 1.39
TM9SF1-212ENST00000532632 SAMD9LQ8IVG5 1584 aa23.7■■□□□ 1.38
TM9SF1-212ENST00000532632 SYCP2Q9BX26 1530 aa23.7■■□□□ 1.38
TM9SF1-212ENST00000532632 EHBP1L1Q8N3D4 1523 aa23.69■■□□□ 1.38
TM9SF1-212ENST00000532632 PLEKHH2Q8IVE3 1493 aa23.68■■□□□ 1.38
TM9SF1-212ENST00000532632 SPAG9O60271 1321 aaKnown RBP23.66■■□□□ 1.38
TM9SF1-212ENST00000532632 KIAA1107Q9UPP5 1409 aa23.66■■□□□ 1.38
TM9SF1-212ENST00000532632 HNRNPMP52272 730 aaKnown RBP eCLIP23.65■■□□□ 1.38
TM9SF1-212ENST00000532632 AGLP35573 1532 aa23.64■■□□□ 1.38
TM9SF1-212ENST00000532632 KIDINS220Q9ULH0 1771 aa23.64■■□□□ 1.37
TM9SF1-212ENST00000532632 HSPA2P54652 639 aa23.63■■□□□ 1.37
TM9SF1-212ENST00000532632 ESF1Q9H501 851 aaKnown RBP23.63■■□□□ 1.37
TM9SF1-212ENST00000532632 LOC105371045A0A1W2PR82 267 aa23.62■■□□□ 1.37
TM9SF1-212ENST00000532632 TIAM1Q13009 1591 aa23.61■■□□□ 1.37
TM9SF1-212ENST00000532632 CEBPAP49715 358 aaPredicted RBP23.61■■□□□ 1.37
TM9SF1-212ENST00000532632 ATP7AQ04656 1500 aa23.59■■□□□ 1.37
TM9SF1-212ENST00000532632 VPS8Q8N3P4 1428 aa23.57■■□□□ 1.36
TM9SF1-212ENST00000532632 ZNF644Q9H582 1327 aaPredicted RBP23.55■■□□□ 1.36
TM9SF1-212ENST00000532632 INO80Q9ULG1 1556 aaPredicted RBP23.54■■□□□ 1.36
TM9SF1-212ENST00000532632 NCOA2Q15596 1464 aa23.54■■□□□ 1.36
TM9SF1-212ENST00000532632 CNTLNQ9NXG0 1405 aa23.53■■□□□ 1.36
TM9SF1-212ENST00000532632 PREX1Q8TCU6 1659 aa23.53■■□□□ 1.36
TM9SF1-212ENST00000532632 UHRF1BP1Q6BDS2 1440 aa23.52■■□□□ 1.36
TM9SF1-212ENST00000532632 SUPT6HQ7KZ85 1726 aaKnown RBP23.52■■□□□ 1.36
TM9SF1-212ENST00000532632 A2MP01023 1474 aa23.5■■□□□ 1.35
TM9SF1-212ENST00000532632 MBD5Q9P267 1494 aa23.49■■□□□ 1.35
TM9SF1-212ENST00000532632 PLXNC1O60486 1568 aa23.48■■□□□ 1.35
TM9SF1-212ENST00000532632 C3P01024 1663 aa23.47■■□□□ 1.35
TM9SF1-212ENST00000532632 CAMSAP2Q08AD1 1489 aa23.46■■□□□ 1.35
TM9SF1-212ENST00000532632 LRRC9Q6ZRR7 1453 aa23.45■■□□□ 1.34
TM9SF1-212ENST00000532632 CCDC141Q6ZP82 1450 aa23.44■■□□□ 1.34
TM9SF1-212ENST00000532632 SETD1BQ9UPS6 1966 aaKnown RBP23.44■■□□□ 1.34
TM9SF1-212ENST00000532632 RTEL1-TNFRSF6BF6WH68 1400 aa23.43■■□□□ 1.34
TM9SF1-212ENST00000532632 ADGBQ8N7X0 1667 aa23.41■■□□□ 1.34
TM9SF1-212ENST00000532632 GGT6Q6P531 493 aa23.41■■□□□ 1.34
TM9SF1-212ENST00000532632 FBXO41Q8TF61 875 aa23.41■■□□□ 1.34
TM9SF1-212ENST00000532632 MROH2AA6NES4 1674 aa23.39■■□□□ 1.34
TM9SF1-212ENST00000532632 RSPH4AQ5TD94 716 aa23.39■■□□□ 1.33
TM9SF1-212ENST00000532632 ZMYM3Q14202 1370 aa23.39■■□□□ 1.33
TM9SF1-212ENST00000532632 MAP3K1Q13233 1512 aa23.38■■□□□ 1.33
TM9SF1-212ENST00000532632 NPATQ14207 1427 aa23.38■■□□□ 1.33
TM9SF1-212ENST00000532632 DMRT2Q9Y5R5 561 aa23.36■■□□□ 1.33
TM9SF1-212ENST00000532632 DHX29Q7Z478 1369 aaKnown RBP23.36■■□□□ 1.33
TM9SF1-212ENST00000532632 KANK4Q5T7N3 995 aaPredicted RBP23.35■■□□□ 1.33
TM9SF1-212ENST00000532632 PPP6R1Q9UPN7 881 aa23.35■■□□□ 1.33
TM9SF1-212ENST00000532632 CLTCQ00610 1675 aaKnown RBP23.35■■□□□ 1.33
TM9SF1-212ENST00000532632 ARHGEF5Q12774 1597 aa23.34■■□□□ 1.33
TM9SF1-212ENST00000532632 TSPY4P0CV99 314 aa23.33■■□□□ 1.33
TM9SF1-212ENST00000532632 TSPY10P0CW01 314 aa23.33■■□□□ 1.33
TM9SF1-212ENST00000532632 APLP2Q06481 763 aa23.33■■□□□ 1.33
TM9SF1-212ENST00000532632 KIF3BO15066 747 aa23.31■■□□□ 1.32
TM9SF1-212ENST00000532632 MYOM3Q5VTT5 1437 aa23.31■■□□□ 1.32
TM9SF1-212ENST00000532632 PTPRKQ15262 1439 aa23.28■■□□□ 1.32
TM9SF1-212ENST00000532632 MIA2Q96PC5 1412 aa23.28■■□□□ 1.32
TM9SF1-212ENST00000532632 STRCQ7RTU9 1775 aa23.28■■□□□ 1.32
TM9SF1-212ENST00000532632 CERKQ8TCT0 537 aa23.27■■□□□ 1.32
TM9SF1-212ENST00000532632 NCOA1Q15788 1441 aa23.25■■□□□ 1.31
TM9SF1-212ENST00000532632 PTPRTO14522 1441 aa23.25■■□□□ 1.31
TM9SF1-212ENST00000532632 FAM135AQ9P2D6 1515 aa23.23■■□□□ 1.31
TM9SF1-212ENST00000532632 KDM5DQ9BY66 1539 aa23.23■■□□□ 1.31
TM9SF1-212ENST00000532632 MYO3AQ8NEV4 1616 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.7 ms