RNA–Protein interactions for RNA: ENST00000532517.5

PHLDB1-220, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 1 (best)

Gene PHLDB1, Length 5,242 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-220ENST00000532517 GOLGA6L3A6NEY3 463 aa18.77■□□□□ 0.59
PHLDB1-220ENST00000532517 GOLGA6L1Q8N7Z2 621 aa18.77■□□□□ 0.59
PHLDB1-220ENST00000532517 RWDD1Q9H446 243 aaPredicted RBP18.76■□□□□ 0.59
PHLDB1-220ENST00000532517 GZF1Q9H116 711 aaPredicted RBP18.76■□□□□ 0.59
PHLDB1-220ENST00000532517 CCDC34Q96HJ3 373 aa18.75■□□□□ 0.59
PHLDB1-220ENST00000532517 MORC1Q86VD1 984 aa18.74■□□□□ 0.59
PHLDB1-220ENST00000532517 USP35Q9P2H5 1018 aa18.74■□□□□ 0.59
PHLDB1-220ENST00000532517 SLKQ9H2G2 1235 aaPredicted RBP18.73■□□□□ 0.59
PHLDB1-220ENST00000532517 NCBP3Q53F19 620 aaKnown RBP18.72■□□□□ 0.59
PHLDB1-220ENST00000532517 RTF1Q92541 710 aaKnown RBP18.72■□□□□ 0.59
PHLDB1-220ENST00000532517 ARID3AQ99856 593 aa18.72■□□□□ 0.59
PHLDB1-220ENST00000532517 ISY1Q9ULR0 285 aaKnown RBP18.71■□□□□ 0.59
PHLDB1-220ENST00000532517 CALD1Q05682 793 aaKnown RBP18.7■□□□□ 0.58
PHLDB1-220ENST00000532517 CSPP1Q1MSJ5 1256 aa18.7■□□□□ 0.58
PHLDB1-220ENST00000532517 TNIKQ9UKE5 1360 aa18.69■□□□□ 0.58
PHLDB1-220ENST00000532517 DCAF11Q8TEB1 546 aa18.69■□□□□ 0.58
PHLDB1-220ENST00000532517 RCAN3Q9UKA8 241 aa18.69■□□□□ 0.58
PHLDB1-220ENST00000532517 KTN1Q86UP2 1357 aaKnown RBP18.67■□□□□ 0.58
PHLDB1-220ENST00000532517 APBB1O00213 710 aa18.67■□□□□ 0.58
PHLDB1-220ENST00000532517 PMFBP1Q8TBY8 1022 aa18.67■□□□□ 0.58
PHLDB1-220ENST00000532517 A0A0U1RQG5 324 aaPredicted RBP18.66■□□□□ 0.58
PHLDB1-220ENST00000532517 CHMP4AQ9BY43 222 aa18.66■□□□□ 0.58
PHLDB1-220ENST00000532517 SRPK2P78362 688 aaKnown RBP18.66■□□□□ 0.58
PHLDB1-220ENST00000532517 IPO9Q96P70 1041 aaKnown RBP18.65■□□□□ 0.58
PHLDB1-220ENST00000532517 HDGFP51858 240 aaKnown RBP18.65■□□□□ 0.58
PHLDB1-220ENST00000532517 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.64■□□□□ 0.57
PHLDB1-220ENST00000532517 ITPRIPQ8IWB1 547 aa18.64■□□□□ 0.57
PHLDB1-220ENST00000532517 CEP164Q9UPV0 1460 aa18.63■□□□□ 0.57
PHLDB1-220ENST00000532517 PHF14O94880 888 aa18.63■□□□□ 0.57
PHLDB1-220ENST00000532517 KANK1Q14678 1352 aa18.62■□□□□ 0.57
PHLDB1-220ENST00000532517 KIF27Q86VH2 1401 aa18.61■□□□□ 0.57
PHLDB1-220ENST00000532517 CCNB3Q8WWL7 1395 aa18.61■□□□□ 0.57
PHLDB1-220ENST00000532517 HDAC5Q9UQL6 1122 aa18.6■□□□□ 0.57
PHLDB1-220ENST00000532517 TPM3P06753 285 aa18.6■□□□□ 0.57
PHLDB1-220ENST00000532517 MFAP1P55081 439 aaKnown RBP18.6■□□□□ 0.57
PHLDB1-220ENST00000532517 RALBP1Q15311 655 aa18.6■□□□□ 0.57
PHLDB1-220ENST00000532517 HSPA5P11021 654 aaKnown RBP18.59■□□□□ 0.57
PHLDB1-220ENST00000532517 GPATCH3Q96I76 525 aa18.59■□□□□ 0.57
PHLDB1-220ENST00000532517 HDGFL2Q7Z4V5 671 aaPredicted RBP18.58■□□□□ 0.57
PHLDB1-220ENST00000532517 HMMRO75330 724 aa18.58■□□□□ 0.57
PHLDB1-220ENST00000532517 HSP90AA2PQ14568 343 aaPredicted RBP18.58■□□□□ 0.57
PHLDB1-220ENST00000532517 SOX12O15370 315 aa18.57■□□□□ 0.56
PHLDB1-220ENST00000532517 HSP90B1P14625 803 aaKnown RBP18.57■□□□□ 0.56
PHLDB1-220ENST00000532517 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
PHLDB1-220ENST00000532517 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
PHLDB1-220ENST00000532517 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
PHLDB1-220ENST00000532517 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.56
PHLDB1-220ENST00000532517 SETQ01105 290 aaPredicted RBP18.56■□□□□ 0.56
PHLDB1-220ENST00000532517 KIF3AQ9Y496 699 aa18.55■□□□□ 0.56
PHLDB1-220ENST00000532517 DDX11L8A8MPP1 907 aa18.54■□□□□ 0.56
PHLDB1-220ENST00000532517 STK31Q9BXU1 1019 aa18.54■□□□□ 0.56
PHLDB1-220ENST00000532517 CEP89Q96ST8 783 aa18.54■□□□□ 0.56
PHLDB1-220ENST00000532517 FHAD1B1AJZ9 1412 aa18.53■□□□□ 0.56
PHLDB1-220ENST00000532517 ST18O60284 1047 aa18.53■□□□□ 0.56
PHLDB1-220ENST00000532517 RASSF8Q8NHQ8 419 aa18.53■□□□□ 0.56
PHLDB1-220ENST00000532517 GORABQ5T7V8 394 aa18.53■□□□□ 0.56
PHLDB1-220ENST00000532517 TSHZ2Q9NRE2 1034 aa18.53■□□□□ 0.56
PHLDB1-220ENST00000532517 TRIM6-TRIM34B2RNG4 842 aa18.52■□□□□ 0.56
PHLDB1-220ENST00000532517 MYO15BQ96JP2 1530 aa18.51■□□□□ 0.55
PHLDB1-220ENST00000532517 SMC4Q9NTJ3 1288 aa18.5■□□□□ 0.55
PHLDB1-220ENST00000532517 KIF16BQ96L93 1317 aa18.49■□□□□ 0.55
PHLDB1-220ENST00000532517 SPAG9O60271 1321 aaKnown RBP18.49■□□□□ 0.55
PHLDB1-220ENST00000532517 PDE3BQ13370 1112 aa18.49■□□□□ 0.55
PHLDB1-220ENST00000532517 PRM3Q9NNZ6 103 aa18.49■□□□□ 0.55
PHLDB1-220ENST00000532517 RB1CC1Q8TDY2 1594 aa18.48■□□□□ 0.55
PHLDB1-220ENST00000532517 SETD5Q9C0A6 1442 aa18.48■□□□□ 0.55
PHLDB1-220ENST00000532517 GPS2Q13227 327 aa18.47■□□□□ 0.55
PHLDB1-220ENST00000532517 SAFB2Q14151 953 aaKnown RBP eCLIP18.47■□□□□ 0.55
PHLDB1-220ENST00000532517 SF3A1Q15459 793 aaKnown RBP18.47■□□□□ 0.55
PHLDB1-220ENST00000532517 SKOR2Q2VWA4 1001 aaPredicted RBP18.46■□□□□ 0.55
PHLDB1-220ENST00000532517 CREBRFQ8IUR6 639 aa18.45■□□□□ 0.54
PHLDB1-220ENST00000532517 CHMP4CQ96CF2 233 aa18.45■□□□□ 0.54
PHLDB1-220ENST00000532517 ATP6V1DQ9Y5K8 247 aa18.44■□□□□ 0.54
PHLDB1-220ENST00000532517 TSR1Q2NL82 804 aaKnown RBP18.44■□□□□ 0.54
PHLDB1-220ENST00000532517 PDE4CQ08493 712 aa18.44■□□□□ 0.54
PHLDB1-220ENST00000532517 TAF7LQ5H9L4 462 aa18.43■□□□□ 0.54
PHLDB1-220ENST00000532517 FOXD4L1Q9NU39 408 aa18.43■□□□□ 0.54
PHLDB1-220ENST00000532517 CENPJQ9HC77 1338 aaPredicted RBP18.43■□□□□ 0.54
PHLDB1-220ENST00000532517 TMX4Q9H1E5 349 aaPredicted RBP18.42■□□□□ 0.54
PHLDB1-220ENST00000532517 NOL8Q76FK4 1167 aaKnown RBP18.42■□□□□ 0.54
PHLDB1-220ENST00000532517 CCDC70Q6NSX1 233 aa18.42■□□□□ 0.54
PHLDB1-220ENST00000532517 GOLGA6L19H0YKK7 550 aa18.42■□□□□ 0.54
PHLDB1-220ENST00000532517 PKD2Q13563 968 aa18.42■□□□□ 0.54
PHLDB1-220ENST00000532517 ZNF330Q9Y3S2 320 aaPredicted RBP18.42■□□□□ 0.54
PHLDB1-220ENST00000532517 ROCK2O75116 1388 aaKnown RBP18.41■□□□□ 0.54
PHLDB1-220ENST00000532517 DDX49Q9Y6V7 483 aaKnown RBP18.41■□□□□ 0.54
PHLDB1-220ENST00000532517 LMOD3Q0VAK6 560 aa18.4■□□□□ 0.54
PHLDB1-220ENST00000532517 CHMP3Q9Y3E7 222 aa18.4■□□□□ 0.54
PHLDB1-220ENST00000532517 TPM1P09493 284 aa18.4■□□□□ 0.54
PHLDB1-220ENST00000532517 BECN2A8MW95 431 aa18.39■□□□□ 0.53
PHLDB1-220ENST00000532517 VSIG10Q8N0Z9 540 aa18.39■□□□□ 0.53
PHLDB1-220ENST00000532517 STK26Q9P289 416 aa18.39■□□□□ 0.53
PHLDB1-220ENST00000532517 GSE1Q14687 1217 aa18.39■□□□□ 0.53
PHLDB1-220ENST00000532517 CSB-PGBD3P0DP91 1061 aa18.39■□□□□ 0.53
PHLDB1-220ENST00000532517 TPD52L1Q16890 204 aaPredicted RBP18.39■□□□□ 0.53
PHLDB1-220ENST00000532517 EIF3AQ14152 1382 aaKnown RBP18.38■□□□□ 0.53
PHLDB1-220ENST00000532517 NLRP13Q86W25 1043 aa18.38■□□□□ 0.53
PHLDB1-220ENST00000532517 CLUAP1Q96AJ1 413 aa18.38■□□□□ 0.53
PHLDB1-220ENST00000532517 PHLDB1Q86UU1 1377 aa18.38■□□□□ 0.53
PHLDB1-220ENST00000532517 CCAR2Q8N163 923 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms