RNA–Protein interactions for RNA: ENST00000532370.1

CTSB-223, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-223ENST00000532370 MYO5CQ9NQX4 1742 aa27.6■■■□□ 2.01
CTSB-223ENST00000532370 GPATCH8Q9UKJ3 1502 aaKnown RBP27.57■■■□□ 2
CTSB-223ENST00000532370 ZNF777Q9ULD5 760 aaPredicted RBP27.56■■■□□ 2
CTSB-223ENST00000532370 POGZQ7Z3K3 1410 aa27.56■■■□□ 2
CTSB-223ENST00000532370 AFAP1Q8N556 730 aa27.55■■■□□ 2
CTSB-223ENST00000532370 CCNB3Q8WWL7 1395 aa27.55■■■□□ 2
CTSB-223ENST00000532370 EHBP1L1Q8N3D4 1523 aa27.52■■■□□ 2
CTSB-223ENST00000532370 KANK4Q5T7N3 995 aaPredicted RBP27.52■■■□□ 2
CTSB-223ENST00000532370 CFDP1Q9UEE9 299 aaPredicted RBP27.52■■■□□ 2
CTSB-223ENST00000532370 RICTORQ6R327 1708 aa27.51■■□□□ 1.99
CTSB-223ENST00000532370 CDC42BPBQ9Y5S2 1711 aa27.51■■□□□ 1.99
CTSB-223ENST00000532370 PREX2Q70Z35 1606 aa27.51■■□□□ 1.99
CTSB-223ENST00000532370 TIAM1Q13009 1591 aa27.51■■□□□ 1.99
CTSB-223ENST00000532370 YEATS2Q9ULM3 1422 aa27.5■■□□□ 1.99
CTSB-223ENST00000532370 ARHGEF12Q9NZN5 1544 aa27.49■■□□□ 1.99
CTSB-223ENST00000532370 TRAPPC8Q9Y2L5 1435 aa27.47■■□□□ 1.99
CTSB-223ENST00000532370 LRRC9Q6ZRR7 1453 aa27.46■■□□□ 1.99
CTSB-223ENST00000532370 CDC42BPAQ5VT25 1732 aa27.46■■□□□ 1.99
CTSB-223ENST00000532370 ZMYM4Q5VZL5 1548 aa27.46■■□□□ 1.99
CTSB-223ENST00000532370 NCOA2Q15596 1464 aa27.44■■□□□ 1.98
CTSB-223ENST00000532370 ZNF644Q9H582 1327 aaPredicted RBP27.44■■□□□ 1.98
CTSB-223ENST00000532370 HNRNPMP52272 730 aaKnown RBP eCLIP27.44■■□□□ 1.98
CTSB-223ENST00000532370 ZNF518AQ6AHZ1 1483 aa27.44■■□□□ 1.98
CTSB-223ENST00000532370 ARID4BQ4LE39 1312 aaPredicted RBP27.43■■□□□ 1.98
CTSB-223ENST00000532370 ABCC1P33527 1531 aa27.43■■□□□ 1.98
CTSB-223ENST00000532370 MAGI2Q86UL8 1455 aa27.43■■□□□ 1.98
CTSB-223ENST00000532370 MAP3K1Q13233 1512 aa27.41■■□□□ 1.98
CTSB-223ENST00000532370 ZFYVE16Q7Z3T8 1539 aa27.41■■□□□ 1.98
CTSB-223ENST00000532370 ARHGEF40Q8TER5 1519 aa27.41■■□□□ 1.98
CTSB-223ENST00000532370 APLP2Q06481 763 aa27.4■■□□□ 1.98
CTSB-223ENST00000532370 MYT1LQ9UL68 1186 aa27.4■■□□□ 1.98
CTSB-223ENST00000532370 SAMD9LQ8IVG5 1584 aa27.39■■□□□ 1.98
CTSB-223ENST00000532370 KDM5CP41229 1560 aa27.36■■□□□ 1.97
CTSB-223ENST00000532370 KIAA1107Q9UPP5 1409 aa27.35■■□□□ 1.97
CTSB-223ENST00000532370 SYCP2Q9BX26 1530 aa27.35■■□□□ 1.97
CTSB-223ENST00000532370 SUPT6HQ7KZ85 1726 aaKnown RBP27.33■■□□□ 1.96
CTSB-223ENST00000532370 ATP10AO60312 1499 aa27.32■■□□□ 1.96
CTSB-223ENST00000532370 MLH3Q9UHC1 1453 aa27.32■■□□□ 1.96
CTSB-223ENST00000532370 PLEKHH2Q8IVE3 1493 aa27.31■■□□□ 1.96
CTSB-223ENST00000532370 ITSN2Q9NZM3 1697 aa27.3■■□□□ 1.96
CTSB-223ENST00000532370 SPAG9O60271 1321 aaKnown RBP27.29■■□□□ 1.96
CTSB-223ENST00000532370 MLECQ14165 292 aa27.28■■□□□ 1.96
CTSB-223ENST00000532370 C9orf84Q5VXU9 1444 aa27.27■■□□□ 1.96
CTSB-223ENST00000532370 MBD5Q9P267 1494 aa27.26■■□□□ 1.95
CTSB-223ENST00000532370 HECW2Q9P2P5 1572 aa27.26■■□□□ 1.95
CTSB-223ENST00000532370 SIGLEC1Q9BZZ2 1709 aa27.25■■□□□ 1.95
CTSB-223ENST00000532370 CAMSAP2Q08AD1 1489 aa27.22■■□□□ 1.95
CTSB-223ENST00000532370 DIP2CQ9Y2E4 1556 aa27.22■■□□□ 1.95
CTSB-223ENST00000532370 MYOM3Q5VTT5 1437 aa27.2■■□□□ 1.94
CTSB-223ENST00000532370 BCORL1Q5H9F3 1711 aa27.19■■□□□ 1.94
CTSB-223ENST00000532370 ADAMTSL3P82987 1691 aa27.19■■□□□ 1.94
CTSB-223ENST00000532370 ABCA6Q8N139 1617 aa27.19■■□□□ 1.94
CTSB-223ENST00000532370 KIDINS220Q9ULH0 1771 aa27.17■■□□□ 1.94
CTSB-223ENST00000532370 PTPRMP28827 1452 aa27.15■■□□□ 1.94
CTSB-223ENST00000532370 MIA2Q96PC5 1412 aa27.14■■□□□ 1.93
CTSB-223ENST00000532370 MADDQ8WXG6 1647 aa27.13■■□□□ 1.93
CTSB-223ENST00000532370 ATP7AQ04656 1500 aa27.13■■□□□ 1.93
CTSB-223ENST00000532370 RSPH4AQ5TD94 716 aa27.13■■□□□ 1.93
CTSB-223ENST00000532370 CCDC141Q6ZP82 1450 aa27.12■■□□□ 1.93
CTSB-223ENST00000532370 PLPPR3Q6T4P5 718 aa27.1■■□□□ 1.93
CTSB-223ENST00000532370 REREQ9P2R6 1566 aa27.09■■□□□ 1.93
CTSB-223ENST00000532370 INO80Q9ULG1 1556 aaPredicted RBP27.09■■□□□ 1.93
CTSB-223ENST00000532370 PPARGC1BQ86YN6 1023 aaKnown RBP27.09■■□□□ 1.93
CTSB-223ENST00000532370 RTEL1-TNFRSF6BF6WH68 1400 aa27.07■■□□□ 1.92
CTSB-223ENST00000532370 TSPY4P0CV99 314 aa27.07■■□□□ 1.92
CTSB-223ENST00000532370 TSPY10P0CW01 314 aa27.07■■□□□ 1.92
CTSB-223ENST00000532370 AGLP35573 1532 aa27.06■■□□□ 1.92
CTSB-223ENST00000532370 A2MP01023 1474 aa27.06■■□□□ 1.92
CTSB-223ENST00000532370 FGD6Q6ZV73 1430 aa27.05■■□□□ 1.92
CTSB-223ENST00000532370 ARHGEF5Q12774 1597 aa27.03■■□□□ 1.92
CTSB-223ENST00000532370 RIMS1Q86UR5 1692 aaKnown RBP27.01■■□□□ 1.92
CTSB-223ENST00000532370 CEBPAP49715 358 aaPredicted RBP27.01■■□□□ 1.91
CTSB-223ENST00000532370 DHX29Q7Z478 1369 aaKnown RBP26.99■■□□□ 1.91
CTSB-223ENST00000532370 PLXNC1O60486 1568 aa26.97■■□□□ 1.91
CTSB-223ENST00000532370 GGT6Q6P531 493 aa26.97■■□□□ 1.91
CTSB-223ENST00000532370 PTPN23Q9H3S7 1636 aa26.96■■□□□ 1.91
CTSB-223ENST00000532370 ABCC5O15440 1437 aa26.96■■□□□ 1.91
CTSB-223ENST00000532370 TCOF1Q13428 1488 aaKnown RBP26.95■■□□□ 1.91
CTSB-223ENST00000532370 ESF1Q9H501 851 aaKnown RBP26.95■■□□□ 1.9
CTSB-223ENST00000532370 FAM50AQ14320 339 aaKnown RBP26.94■■□□□ 1.9
CTSB-223ENST00000532370 FER1L4A9Z1Z3 1794 aa26.92■■□□□ 1.9
CTSB-223ENST00000532370 KIF3BO15066 747 aa26.92■■□□□ 1.9
CTSB-223ENST00000532370 DAPK1P53355 1430 aa26.9■■□□□ 1.9
CTSB-223ENST00000532370 CHIC2Q9UKJ5 165 aa26.89■■□□□ 1.9
CTSB-223ENST00000532370 ADGBQ8N7X0 1667 aa26.89■■□□□ 1.89
CTSB-223ENST00000532370 MAST1Q9Y2H9 1570 aa26.88■■□□□ 1.89
CTSB-223ENST00000532370 RRP7BPQ9NSQ0 103 aa26.87■■□□□ 1.89
CTSB-223ENST00000532370 CNTLNQ9NXG0 1405 aa26.84■■□□□ 1.89
CTSB-223ENST00000532370 SHANK2Q9UPX8 1470 aa26.83■■□□□ 1.89
CTSB-223ENST00000532370 ZMYM3Q14202 1370 aa26.83■■□□□ 1.88
CTSB-223ENST00000532370 PPP6R1Q9UPN7 881 aa26.82■■□□□ 1.88
CTSB-223ENST00000532370 KIF15Q9NS87 1388 aa26.82■■□□□ 1.88
CTSB-223ENST00000532370 LMTK3Q96Q04 1460 aa26.81■■□□□ 1.88
CTSB-223ENST00000532370 DNMT1P26358 1616 aaKnown RBP26.8■■□□□ 1.88
CTSB-223ENST00000532370 HSPA2P54652 639 aa26.79■■□□□ 1.88
CTSB-223ENST00000532370 ANKRD30AQ9BXX3 1397 aa26.75■■□□□ 1.87
CTSB-223ENST00000532370 WASHC2CQ9Y4E1 1318 aa26.75■■□□□ 1.87
CTSB-223ENST00000532370 PTPRKQ15262 1439 aa26.74■■□□□ 1.87
CTSB-223ENST00000532370 DUOX2Q9NRD8 1548 aa26.74■■□□□ 1.87
CTSB-223ENST00000532370 NCOA1Q15788 1441 aa26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms