RNA–Protein interactions for RNA: ENST00000531593.1

GPAA1-216, Transcript of glycosylphosphatidylinositol anchor attachment 1, humanhuman

TSL 3

Gene GPAA1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPAA1-216ENST00000531593 PTPRMP28827 1452 aa26.59■■□□□ 1.85
GPAA1-216ENST00000531593 ARHGAP5Q13017 1502 aa26.59■■□□□ 1.85
GPAA1-216ENST00000531593 ZFYVE16Q7Z3T8 1539 aa26.59■■□□□ 1.85
GPAA1-216ENST00000531593 MYO5CQ9NQX4 1742 aa26.59■■□□□ 1.85
GPAA1-216ENST00000531593 ZMYM4Q5VZL5 1548 aa26.58■■□□□ 1.85
GPAA1-216ENST00000531593 CCDC18Q5T9S5 1454 aa26.57■■□□□ 1.84
GPAA1-216ENST00000531593 BCORL1Q5H9F3 1711 aa26.57■■□□□ 1.84
GPAA1-216ENST00000531593 MLECQ14165 292 aa26.56■■□□□ 1.84
GPAA1-216ENST00000531593 PLPPR3Q6T4P5 718 aa26.56■■□□□ 1.84
GPAA1-216ENST00000531593 MADDQ8WXG6 1647 aa26.54■■□□□ 1.84
GPAA1-216ENST00000531593 MAGI2Q86UL8 1455 aa26.52■■□□□ 1.84
GPAA1-216ENST00000531593 AFAP1Q8N556 730 aa26.52■■□□□ 1.84
GPAA1-216ENST00000531593 FYCO1Q9BQS8 1478 aa26.52■■□□□ 1.84
GPAA1-216ENST00000531593 MYT1LQ9UL68 1186 aa26.52■■□□□ 1.84
GPAA1-216ENST00000531593 SIGLEC1Q9BZZ2 1709 aa26.48■■□□□ 1.83
GPAA1-216ENST00000531593 RIMS1Q86UR5 1692 aaKnown RBP26.45■■□□□ 1.82
GPAA1-216ENST00000531593 ZNF518AQ6AHZ1 1483 aa26.44■■□□□ 1.82
GPAA1-216ENST00000531593 ATP10AO60312 1499 aa26.43■■□□□ 1.82
GPAA1-216ENST00000531593 ZNF777Q9ULD5 760 aaPredicted RBP26.43■■□□□ 1.82
GPAA1-216ENST00000531593 CDC42BPBQ9Y5S2 1711 aa26.42■■□□□ 1.82
GPAA1-216ENST00000531593 C9orf84Q5VXU9 1444 aa26.42■■□□□ 1.82
GPAA1-216ENST00000531593 PREX2Q70Z35 1606 aa26.4■■□□□ 1.82
GPAA1-216ENST00000531593 TRAPPC8Q9Y2L5 1435 aa26.39■■□□□ 1.82
GPAA1-216ENST00000531593 ARHGEF12Q9NZN5 1544 aa26.39■■□□□ 1.82
GPAA1-216ENST00000531593 CEP162Q5TB80 1403 aa26.38■■□□□ 1.81
GPAA1-216ENST00000531593 KDM5CP41229 1560 aa26.37■■□□□ 1.81
GPAA1-216ENST00000531593 ABCC1P33527 1531 aa26.36■■□□□ 1.81
GPAA1-216ENST00000531593 MTUS2Q5JR59 1369 aa26.34■■□□□ 1.81
GPAA1-216ENST00000531593 LOC105371045A0A1W2PR82 267 aa26.33■■□□□ 1.81
GPAA1-216ENST00000531593 ILDR1Q86SU0 546 aaPredicted RBP26.33■■□□□ 1.81
GPAA1-216ENST00000531593 CDC42BPAQ5VT25 1732 aa26.33■■□□□ 1.81
GPAA1-216ENST00000531593 GPATCH8Q9UKJ3 1502 aaKnown RBP26.32■■□□□ 1.8
GPAA1-216ENST00000531593 DIP2CQ9Y2E4 1556 aa26.31■■□□□ 1.8
GPAA1-216ENST00000531593 HNRNPMP52272 730 aaKnown RBP eCLIP26.3■■□□□ 1.8
GPAA1-216ENST00000531593 ITSN2Q9NZM3 1697 aa26.3■■□□□ 1.8
GPAA1-216ENST00000531593 CCNB3Q8WWL7 1395 aa26.3■■□□□ 1.8
GPAA1-216ENST00000531593 LMTK3Q96Q04 1460 aa26.3■■□□□ 1.8
GPAA1-216ENST00000531593 HSPA2P54652 639 aa26.29■■□□□ 1.8
GPAA1-216ENST00000531593 MLH3Q9UHC1 1453 aa26.29■■□□□ 1.8
GPAA1-216ENST00000531593 FER1L4A9Z1Z3 1794 aa26.28■■□□□ 1.8
GPAA1-216ENST00000531593 CEBPAP49715 358 aaPredicted RBP26.28■■□□□ 1.8
GPAA1-216ENST00000531593 CFDP1Q9UEE9 299 aaPredicted RBP26.28■■□□□ 1.8
GPAA1-216ENST00000531593 ABCA6Q8N139 1617 aa26.28■■□□□ 1.8
GPAA1-216ENST00000531593 SAMD9LQ8IVG5 1584 aa26.27■■□□□ 1.8
GPAA1-216ENST00000531593 SYCP2Q9BX26 1530 aa26.25■■□□□ 1.79
GPAA1-216ENST00000531593 SPAG9O60271 1321 aaKnown RBP26.21■■□□□ 1.79
GPAA1-216ENST00000531593 ZNF644Q9H582 1327 aaPredicted RBP26.19■■□□□ 1.78
GPAA1-216ENST00000531593 KIDINS220Q9ULH0 1771 aa26.19■■□□□ 1.78
GPAA1-216ENST00000531593 EHBP1L1Q8N3D4 1523 aa26.19■■□□□ 1.78
GPAA1-216ENST00000531593 REREQ9P2R6 1566 aa26.17■■□□□ 1.78
GPAA1-216ENST00000531593 ESF1Q9H501 851 aaKnown RBP26.16■■□□□ 1.78
GPAA1-216ENST00000531593 TIAM1Q13009 1591 aa26.15■■□□□ 1.78
GPAA1-216ENST00000531593 KIAA1107Q9UPP5 1409 aa26.14■■□□□ 1.78
GPAA1-216ENST00000531593 PLEKHH2Q8IVE3 1493 aa26.14■■□□□ 1.78
GPAA1-216ENST00000531593 AGLP35573 1532 aa26.14■■□□□ 1.77
GPAA1-216ENST00000531593 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
GPAA1-216ENST00000531593 NCOA2Q15596 1464 aa26.07■■□□□ 1.76
GPAA1-216ENST00000531593 VPS8Q8N3P4 1428 aa26.06■■□□□ 1.76
GPAA1-216ENST00000531593 INO80Q9ULG1 1556 aaPredicted RBP26.03■■□□□ 1.76
GPAA1-216ENST00000531593 UHRF1BP1Q6BDS2 1440 aa26.03■■□□□ 1.76
GPAA1-216ENST00000531593 A2MP01023 1474 aa26.03■■□□□ 1.76
GPAA1-216ENST00000531593 MBD5Q9P267 1494 aa26.03■■□□□ 1.76
GPAA1-216ENST00000531593 SUPT6HQ7KZ85 1726 aaKnown RBP26.02■■□□□ 1.76
GPAA1-216ENST00000531593 GGT6Q6P531 493 aa26.01■■□□□ 1.75
GPAA1-216ENST00000531593 PREX1Q8TCU6 1659 aa26.01■■□□□ 1.75
GPAA1-216ENST00000531593 C3P01024 1663 aa26■■□□□ 1.75
GPAA1-216ENST00000531593 CNTLNQ9NXG0 1405 aa25.98■■□□□ 1.75
GPAA1-216ENST00000531593 KANK4Q5T7N3 995 aaPredicted RBP25.98■■□□□ 1.75
GPAA1-216ENST00000531593 CAMSAP2Q08AD1 1489 aa25.97■■□□□ 1.75
GPAA1-216ENST00000531593 FBXO41Q8TF61 875 aa25.96■■□□□ 1.75
GPAA1-216ENST00000531593 LRRC9Q6ZRR7 1453 aa25.96■■□□□ 1.75
GPAA1-216ENST00000531593 PLXNC1O60486 1568 aa25.95■■□□□ 1.74
GPAA1-216ENST00000531593 ZMYM3Q14202 1370 aa25.95■■□□□ 1.74
GPAA1-216ENST00000531593 CCDC141Q6ZP82 1450 aa25.92■■□□□ 1.74
GPAA1-216ENST00000531593 RTEL1-TNFRSF6BF6WH68 1400 aa25.9■■□□□ 1.74
GPAA1-216ENST00000531593 DHX29Q7Z478 1369 aaKnown RBP25.88■■□□□ 1.73
GPAA1-216ENST00000531593 SETD1BQ9UPS6 1966 aaKnown RBP25.87■■□□□ 1.73
GPAA1-216ENST00000531593 CLTCQ00610 1675 aaKnown RBP25.87■■□□□ 1.73
GPAA1-216ENST00000531593 ADGBQ8N7X0 1667 aa25.87■■□□□ 1.73
GPAA1-216ENST00000531593 KIF3BO15066 747 aa25.86■■□□□ 1.73
GPAA1-216ENST00000531593 RSPH4AQ5TD94 716 aa25.85■■□□□ 1.73
GPAA1-216ENST00000531593 TSPY4P0CV99 314 aa25.84■■□□□ 1.73
GPAA1-216ENST00000531593 TSPY10P0CW01 314 aa25.84■■□□□ 1.73
GPAA1-216ENST00000531593 MROH2AA6NES4 1674 aa25.83■■□□□ 1.73
GPAA1-216ENST00000531593 NPATQ14207 1427 aa25.83■■□□□ 1.73
GPAA1-216ENST00000531593 CERKQ8TCT0 537 aa25.83■■□□□ 1.73
GPAA1-216ENST00000531593 STRCQ7RTU9 1775 aa25.82■■□□□ 1.72
GPAA1-216ENST00000531593 DMRT2Q9Y5R5 561 aa25.82■■□□□ 1.72
GPAA1-216ENST00000531593 MAP3K1Q13233 1512 aa25.82■■□□□ 1.72
GPAA1-216ENST00000531593 APLP2Q06481 763 aa25.81■■□□□ 1.72
GPAA1-216ENST00000531593 PTPRKQ15262 1439 aa25.8■■□□□ 1.72
GPAA1-216ENST00000531593 PPP6R1Q9UPN7 881 aa25.79■■□□□ 1.72
GPAA1-216ENST00000531593 ARHGEF5Q12774 1597 aa25.78■■□□□ 1.72
GPAA1-216ENST00000531593 MYOM3Q5VTT5 1437 aa25.78■■□□□ 1.72
GPAA1-216ENST00000531593 NCOA1Q15788 1441 aa25.75■■□□□ 1.71
GPAA1-216ENST00000531593 CAMSAP1Q5T5Y3 1602 aa25.74■■□□□ 1.71
GPAA1-216ENST00000531593 NCKAP5LQ9HCH0 1330 aa25.73■■□□□ 1.71
GPAA1-216ENST00000531593 FBXO31Q5XUX0 539 aaPredicted RBP25.73■■□□□ 1.71
GPAA1-216ENST00000531593 PTPRTO14522 1441 aa25.72■■□□□ 1.71
GPAA1-216ENST00000531593 MIA2Q96PC5 1412 aa25.72■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms