RNA–Protein interactions for RNA: ENST00000531089.5

CTSB-220, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CTSB, Length 1,436 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-220ENST00000531089 ARHGEF40Q8TER5 1519 aa25.15■■□□□ 1.62
CTSB-220ENST00000531089 MAGI2Q86UL8 1455 aa25.14■■□□□ 1.62
CTSB-220ENST00000531089 CLIP1P30622 1438 aa25.12■■□□□ 1.61
CTSB-220ENST00000531089 POGZQ7Z3K3 1410 aa25.11■■□□□ 1.61
CTSB-220ENST00000531089 ZFYVE16Q7Z3T8 1539 aa25.1■■□□□ 1.61
CTSB-220ENST00000531089 PCF11O94913 1555 aaKnown RBP25.1■■□□□ 1.61
CTSB-220ENST00000531089 AFAP1Q8N556 730 aa25.1■■□□□ 1.61
CTSB-220ENST00000531089 MADDQ8WXG6 1647 aa25.1■■□□□ 1.61
CTSB-220ENST00000531089 SIGLEC1Q9BZZ2 1709 aa25.1■■□□□ 1.61
CTSB-220ENST00000531089 CDC42BPBQ9Y5S2 1711 aa25.08■■□□□ 1.61
CTSB-220ENST00000531089 CCDC18Q5T9S5 1454 aa25.08■■□□□ 1.61
CTSB-220ENST00000531089 ARHGAP5Q13017 1502 aa25.06■■□□□ 1.6
CTSB-220ENST00000531089 ATP10AO60312 1499 aa25.04■■□□□ 1.6
CTSB-220ENST00000531089 FYCO1Q9BQS8 1478 aa25.03■■□□□ 1.6
CTSB-220ENST00000531089 MLECQ14165 292 aa25.03■■□□□ 1.6
CTSB-220ENST00000531089 RIMS1Q86UR5 1692 aaKnown RBP25.01■■□□□ 1.59
CTSB-220ENST00000531089 ZNF518AQ6AHZ1 1483 aa25■■□□□ 1.59
CTSB-220ENST00000531089 ILDR1Q86SU0 546 aaPredicted RBP24.97■■□□□ 1.59
CTSB-220ENST00000531089 ARHGEF12Q9NZN5 1544 aa24.97■■□□□ 1.59
CTSB-220ENST00000531089 KDM5CP41229 1560 aa24.97■■□□□ 1.59
CTSB-220ENST00000531089 PREX2Q70Z35 1606 aa24.96■■□□□ 1.59
CTSB-220ENST00000531089 CDC42BPAQ5VT25 1732 aa24.96■■□□□ 1.59
CTSB-220ENST00000531089 C9orf84Q5VXU9 1444 aa24.95■■□□□ 1.59
CTSB-220ENST00000531089 TRAPPC8Q9Y2L5 1435 aa24.95■■□□□ 1.58
CTSB-220ENST00000531089 PLPPR3Q6T4P5 718 aa24.94■■□□□ 1.58
CTSB-220ENST00000531089 MYT1LQ9UL68 1186 aa24.94■■□□□ 1.58
CTSB-220ENST00000531089 MLH3Q9UHC1 1453 aa24.91■■□□□ 1.58
CTSB-220ENST00000531089 GPATCH8Q9UKJ3 1502 aaKnown RBP24.9■■□□□ 1.58
CTSB-220ENST00000531089 ZNF777Q9ULD5 760 aaPredicted RBP24.9■■□□□ 1.58
CTSB-220ENST00000531089 LMTK3Q96Q04 1460 aa24.9■■□□□ 1.58
CTSB-220ENST00000531089 ABCC1P33527 1531 aa24.9■■□□□ 1.58
CTSB-220ENST00000531089 FER1L4A9Z1Z3 1794 aa24.89■■□□□ 1.57
CTSB-220ENST00000531089 ITSN2Q9NZM3 1697 aa24.87■■□□□ 1.57
CTSB-220ENST00000531089 DIP2CQ9Y2E4 1556 aa24.87■■□□□ 1.57
CTSB-220ENST00000531089 CEBPAP49715 358 aaPredicted RBP24.86■■□□□ 1.57
CTSB-220ENST00000531089 HNRNPMP52272 730 aaKnown RBP eCLIP24.86■■□□□ 1.57
CTSB-220ENST00000531089 LOC105371045A0A1W2PR82 267 aa24.85■■□□□ 1.57
CTSB-220ENST00000531089 HSPA2P54652 639 aa24.84■■□□□ 1.57
CTSB-220ENST00000531089 CEP162Q5TB80 1403 aa24.83■■□□□ 1.57
CTSB-220ENST00000531089 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.57
CTSB-220ENST00000531089 KIDINS220Q9ULH0 1771 aa24.83■■□□□ 1.57
CTSB-220ENST00000531089 MTUS2Q5JR59 1369 aa24.82■■□□□ 1.56
CTSB-220ENST00000531089 ABCA6Q8N139 1617 aa24.82■■□□□ 1.56
CTSB-220ENST00000531089 SAMD9LQ8IVG5 1584 aa24.82■■□□□ 1.56
CTSB-220ENST00000531089 REREQ9P2R6 1566 aa24.81■■□□□ 1.56
CTSB-220ENST00000531089 CCNB3Q8WWL7 1395 aa24.8■■□□□ 1.56
CTSB-220ENST00000531089 SETD1BQ9UPS6 1966 aaKnown RBP24.78■■□□□ 1.56
CTSB-220ENST00000531089 KIAA1107Q9UPP5 1409 aa24.77■■□□□ 1.56
CTSB-220ENST00000531089 AGLP35573 1532 aa24.77■■□□□ 1.56
CTSB-220ENST00000531089 SPAG9O60271 1321 aaKnown RBP24.75■■□□□ 1.55
CTSB-220ENST00000531089 SYCP2Q9BX26 1530 aa24.75■■□□□ 1.55
CTSB-220ENST00000531089 ZNF644Q9H582 1327 aaPredicted RBP24.74■■□□□ 1.55
CTSB-220ENST00000531089 PLEKHH2Q8IVE3 1493 aa24.71■■□□□ 1.55
CTSB-220ENST00000531089 EHBP1L1Q8N3D4 1523 aa24.68■■□□□ 1.54
CTSB-220ENST00000531089 TIAM1Q13009 1591 aa24.68■■□□□ 1.54
CTSB-220ENST00000531089 ESF1Q9H501 851 aaKnown RBP24.68■■□□□ 1.54
CTSB-220ENST00000531089 C3P01024 1663 aa24.65■■□□□ 1.54
CTSB-220ENST00000531089 PREX1Q8TCU6 1659 aa24.65■■□□□ 1.54
CTSB-220ENST00000531089 MBD5Q9P267 1494 aa24.65■■□□□ 1.54
CTSB-220ENST00000531089 ATP7AQ04656 1500 aa24.64■■□□□ 1.54
CTSB-220ENST00000531089 FBXO41Q8TF61 875 aa24.64■■□□□ 1.54
CTSB-220ENST00000531089 SUPT6HQ7KZ85 1726 aaKnown RBP24.63■■□□□ 1.53
CTSB-220ENST00000531089 INO80Q9ULG1 1556 aaPredicted RBP24.6■■□□□ 1.53
CTSB-220ENST00000531089 A2MP01023 1474 aa24.59■■□□□ 1.53
CTSB-220ENST00000531089 NCOA2Q15596 1464 aa24.59■■□□□ 1.53
CTSB-220ENST00000531089 CNTLNQ9NXG0 1405 aa24.59■■□□□ 1.53
CTSB-220ENST00000531089 UHRF1BP1Q6BDS2 1440 aa24.58■■□□□ 1.52
CTSB-220ENST00000531089 VPS8Q8N3P4 1428 aa24.58■■□□□ 1.52
CTSB-220ENST00000531089 ZMYM3Q14202 1370 aa24.57■■□□□ 1.52
CTSB-220ENST00000531089 STRCQ7RTU9 1775 aa24.56■■□□□ 1.52
CTSB-220ENST00000531089 GGT6Q6P531 493 aa24.56■■□□□ 1.52
CTSB-220ENST00000531089 PLXNC1O60486 1568 aa24.55■■□□□ 1.52
CTSB-220ENST00000531089 RTEL1-TNFRSF6BF6WH68 1400 aa24.55■■□□□ 1.52
CTSB-220ENST00000531089 RSPH4AQ5TD94 716 aa24.55■■□□□ 1.52
CTSB-220ENST00000531089 KANK4Q5T7N3 995 aaPredicted RBP24.53■■□□□ 1.52
CTSB-220ENST00000531089 ADGBQ8N7X0 1667 aa24.52■■□□□ 1.52
CTSB-220ENST00000531089 LRRC9Q6ZRR7 1453 aa24.52■■□□□ 1.52
CTSB-220ENST00000531089 PPP6R1Q9UPN7 881 aa24.52■■□□□ 1.52
CTSB-220ENST00000531089 DMRT2Q9Y5R5 561 aa24.52■■□□□ 1.52
CTSB-220ENST00000531089 MROH2AA6NES4 1674 aa24.51■■□□□ 1.51
CTSB-220ENST00000531089 DHX29Q7Z478 1369 aaKnown RBP24.51■■□□□ 1.51
CTSB-220ENST00000531089 CERKQ8TCT0 537 aa24.49■■□□□ 1.51
CTSB-220ENST00000531089 CAMSAP2Q08AD1 1489 aa24.48■■□□□ 1.51
CTSB-220ENST00000531089 CLTCQ00610 1675 aaKnown RBP24.48■■□□□ 1.51
CTSB-220ENST00000531089 NPATQ14207 1427 aa24.46■■□□□ 1.51
CTSB-220ENST00000531089 MAP3K1Q13233 1512 aa24.46■■□□□ 1.51
CTSB-220ENST00000531089 CCDC141Q6ZP82 1450 aa24.46■■□□□ 1.51
CTSB-220ENST00000531089 KIF3BO15066 747 aa24.44■■□□□ 1.5
CTSB-220ENST00000531089 TSPY4P0CV99 314 aa24.44■■□□□ 1.5
CTSB-220ENST00000531089 TSPY10P0CW01 314 aa24.44■■□□□ 1.5
CTSB-220ENST00000531089 PTPRKQ15262 1439 aa24.42■■□□□ 1.5
CTSB-220ENST00000531089 ARHGEF5Q12774 1597 aa24.4■■□□□ 1.5
CTSB-220ENST00000531089 PTPRTO14522 1441 aa24.39■■□□□ 1.5
CTSB-220ENST00000531089 NCOA1Q15788 1441 aa24.36■■□□□ 1.49
CTSB-220ENST00000531089 CAMSAP1Q5T5Y3 1602 aa24.34■■□□□ 1.49
CTSB-220ENST00000531089 FBXO31Q5XUX0 539 aaPredicted RBP24.34■■□□□ 1.49
CTSB-220ENST00000531089 MIA2Q96PC5 1412 aa24.34■■□□□ 1.49
CTSB-220ENST00000531089 NCKAP5LQ9HCH0 1330 aa24.33■■□□□ 1.49
CTSB-220ENST00000531089 MYOM3Q5VTT5 1437 aa24.33■■□□□ 1.49
CTSB-220ENST00000531089 APLP2Q06481 763 aa24.32■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms