RNA–Protein interactions for RNA: ENST00000530620.5

C11orf54-209, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-209ENST00000530620 NEO1Q92859 1461 aa17.89■□□□□ 0.45
C11orf54-209ENST00000530620 TTC37Q6PGP7 1564 aa17.86■□□□□ 0.45
C11orf54-209ENST00000530620 ADAMTSL3P82987 1691 aa17.86■□□□□ 0.45
C11orf54-209ENST00000530620 RICTORQ6R327 1708 aa17.86■□□□□ 0.45
C11orf54-209ENST00000530620 PHLDB1Q86UU1 1377 aa17.85■□□□□ 0.45
C11orf54-209ENST00000530620 SPINK5Q9NQ38 1064 aaPredicted RBP17.85■□□□□ 0.45
C11orf54-209ENST00000530620 CFAP74Q9C0B2 1584 aa17.84■□□□□ 0.45
C11orf54-209ENST00000530620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.83■□□□□ 0.45
C11orf54-209ENST00000530620 CDK13Q14004 1512 aaKnown RBP17.82■□□□□ 0.44
C11orf54-209ENST00000530620 BCORL1Q5H9F3 1711 aa17.82■□□□□ 0.44
C11orf54-209ENST00000530620 ARHGEF40Q8TER5 1519 aa17.82■□□□□ 0.44
C11orf54-209ENST00000530620 RAPGEF3O95398 923 aa17.81■□□□□ 0.44
C11orf54-209ENST00000530620 CAPN15O75808 1086 aa17.8■□□□□ 0.44
C11orf54-209ENST00000530620 MADDQ8WXG6 1647 aa17.79■□□□□ 0.44
C11orf54-209ENST00000530620 HECW1Q76N89 1606 aa17.78■□□□□ 0.44
C11orf54-209ENST00000530620 FANCAO15360 1455 aa17.77■□□□□ 0.44
C11orf54-209ENST00000530620 LRRIQ1Q96JM4 1722 aa17.77■□□□□ 0.44
C11orf54-209ENST00000530620 DENND4BO75064 1496 aaPredicted RBP17.75■□□□□ 0.43
C11orf54-209ENST00000530620 SIGLEC1Q9BZZ2 1709 aa17.75■□□□□ 0.43
C11orf54-209ENST00000530620 MYO5CQ9NQX4 1742 aa17.75■□□□□ 0.43
C11orf54-209ENST00000530620 PLEKHD1A6NEE1 506 aa17.75■□□□□ 0.43
C11orf54-209ENST00000530620 ATXN8OSP0DMR3 200 aa17.75■□□□□ 0.43
C11orf54-209ENST00000530620 ZMYM4Q5VZL5 1548 aa17.75■□□□□ 0.43
C11orf54-209ENST00000530620 PTPRMP28827 1452 aa17.75■□□□□ 0.43
C11orf54-209ENST00000530620 AKNAQ7Z591 1439 aa17.74■□□□□ 0.43
C11orf54-209ENST00000530620 ARHGAP35Q9NRY4 1499 aa17.74■□□□□ 0.43
C11orf54-209ENST00000530620 RIMS1Q86UR5 1692 aaKnown RBP17.74■□□□□ 0.43
C11orf54-209ENST00000530620 KIF14Q15058 1648 aa17.71■□□□□ 0.43
C11orf54-209ENST00000530620 FMN1Q68DA7 1419 aa17.71■□□□□ 0.43
C11orf54-209ENST00000530620 ZNF219Q9P2Y4 722 aaPredicted RBP17.7■□□□□ 0.42
C11orf54-209ENST00000530620 ZFYVE16Q7Z3T8 1539 aa17.69■□□□□ 0.42
C11orf54-209ENST00000530620 ILDR1Q86SU0 546 aaPredicted RBP17.69■□□□□ 0.42
C11orf54-209ENST00000530620 UBTFP17480 764 aaKnown RBP17.68■□□□□ 0.42
C11orf54-209ENST00000530620 ATF5Q9Y2D1 282 aaPredicted RBP17.68■□□□□ 0.42
C11orf54-209ENST00000530620 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
C11orf54-209ENST00000530620 FER1L4A9Z1Z3 1794 aa17.66■□□□□ 0.42
C11orf54-209ENST00000530620 YEATS2Q9ULM3 1422 aa17.65■□□□□ 0.42
C11orf54-209ENST00000530620 PLCH2O75038 1416 aa17.64■□□□□ 0.42
C11orf54-209ENST00000530620 POGZQ7Z3K3 1410 aa17.64■□□□□ 0.42
C11orf54-209ENST00000530620 PCF11O94913 1555 aaKnown RBP17.64■□□□□ 0.41
C11orf54-209ENST00000530620 ATP1B4Q9UN42 357 aaPredicted RBP17.62■□□□□ 0.41
C11orf54-209ENST00000530620 MAGI2Q86UL8 1455 aa17.62■□□□□ 0.41
C11orf54-209ENST00000530620 CDC42BPBQ9Y5S2 1711 aa17.61■□□□□ 0.41
C11orf54-209ENST00000530620 SCAPERQ9BY12 1400 aa17.61■□□□□ 0.41
C11orf54-209ENST00000530620 LMTK3Q96Q04 1460 aa17.61■□□□□ 0.41
C11orf54-209ENST00000530620 TROQ12816 1431 aaPredicted RBP17.6■□□□□ 0.41
C11orf54-209ENST00000530620 PREX2Q70Z35 1606 aa17.58■□□□□ 0.41
C11orf54-209ENST00000530620 ARHGAP5Q13017 1502 aa17.58■□□□□ 0.41
C11orf54-209ENST00000530620 KDM5CP41229 1560 aa17.57■□□□□ 0.4
C11orf54-209ENST00000530620 CLIP1P30622 1438 aa17.56■□□□□ 0.4
C11orf54-209ENST00000530620 CDC42BPAQ5VT25 1732 aa17.55■□□□□ 0.4
C11orf54-209ENST00000530620 CDK11AQ9UQ88 783 aaPredicted RBP17.54■□□□□ 0.4
C11orf54-209ENST00000530620 ZNF518AQ6AHZ1 1483 aa17.54■□□□□ 0.4
C11orf54-209ENST00000530620 ITSN2Q9NZM3 1697 aa17.54■□□□□ 0.4
C11orf54-209ENST00000530620 ARHGEF12Q9NZN5 1544 aa17.53■□□□□ 0.4
C11orf54-209ENST00000530620 CCDC18Q5T9S5 1454 aa17.53■□□□□ 0.4
C11orf54-209ENST00000530620 C9orf84Q5VXU9 1444 aa17.53■□□□□ 0.4
C11orf54-209ENST00000530620 DIP2CQ9Y2E4 1556 aa17.53■□□□□ 0.4
C11orf54-209ENST00000530620 ATP10AO60312 1499 aa17.52■□□□□ 0.4
C11orf54-209ENST00000530620 ABCA6Q8N139 1617 aa17.52■□□□□ 0.4
C11orf54-209ENST00000530620 DSG3P32926 999 aa17.52■□□□□ 0.4
C11orf54-209ENST00000530620 EFCAB2Q5VUJ9 269 aa17.52■□□□□ 0.4
C11orf54-209ENST00000530620 CASKIN1Q8WXD9 1431 aa17.52■□□□□ 0.4
C11orf54-209ENST00000530620 ABCC1P33527 1531 aa17.51■□□□□ 0.39
C11orf54-209ENST00000530620 MLECQ14165 292 aa17.5■□□□□ 0.39
C11orf54-209ENST00000530620 PREX1Q8TCU6 1659 aa17.49■□□□□ 0.39
C11orf54-209ENST00000530620 FYCO1Q9BQS8 1478 aa17.49■□□□□ 0.39
C11orf54-209ENST00000530620 REREQ9P2R6 1566 aa17.47■□□□□ 0.39
C11orf54-209ENST00000530620 KIDINS220Q9ULH0 1771 aa17.45■□□□□ 0.38
C11orf54-209ENST00000530620 ABCB7O75027 752 aa17.44■□□□□ 0.38
C11orf54-209ENST00000530620 AFAP1Q8N556 730 aa17.44■□□□□ 0.38
C11orf54-209ENST00000530620 HSPA2P54652 639 aa17.43■□□□□ 0.38
C11orf54-209ENST00000530620 MLH3Q9UHC1 1453 aa17.43■□□□□ 0.38
C11orf54-209ENST00000530620 C3P01024 1663 aa17.42■□□□□ 0.38
C11orf54-209ENST00000530620 SAMD9LQ8IVG5 1584 aa17.42■□□□□ 0.38
C11orf54-209ENST00000530620 TRAPPC8Q9Y2L5 1435 aa17.42■□□□□ 0.38
C11orf54-209ENST00000530620 FBXO41Q8TF61 875 aa17.39■□□□□ 0.37
C11orf54-209ENST00000530620 AGLP35573 1532 aa17.38■□□□□ 0.37
C11orf54-209ENST00000530620 SYCP2Q9BX26 1530 aa17.38■□□□□ 0.37
C11orf54-209ENST00000530620 POLA2Q14181 598 aa17.37■□□□□ 0.37
C11orf54-209ENST00000530620 MYT1LQ9UL68 1186 aa17.37■□□□□ 0.37
C11orf54-209ENST00000530620 STRCQ7RTU9 1775 aa17.37■□□□□ 0.37
C11orf54-209ENST00000530620 SETD1BQ9UPS6 1966 aaKnown RBP17.37■□□□□ 0.37
C11orf54-209ENST00000530620 CEBPAP49715 358 aaPredicted RBP17.35■□□□□ 0.37
C11orf54-209ENST00000530620 GPATCH8Q9UKJ3 1502 aaKnown RBP17.35■□□□□ 0.37
C11orf54-209ENST00000530620 SUPT6HQ7KZ85 1726 aaKnown RBP17.34■□□□□ 0.37
C11orf54-209ENST00000530620 INO80Q9ULG1 1556 aaPredicted RBP17.34■□□□□ 0.37
C11orf54-209ENST00000530620 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
C11orf54-209ENST00000530620 ATP7AQ04656 1500 aa17.31■□□□□ 0.36
C11orf54-209ENST00000530620 TIAM1Q13009 1591 aa17.31■□□□□ 0.36
C11orf54-209ENST00000530620 UHRF1BP1Q6BDS2 1440 aa17.3■□□□□ 0.36
C11orf54-209ENST00000530620 PLXNC1O60486 1568 aa17.29■□□□□ 0.36
C11orf54-209ENST00000530620 ZNF777Q9ULD5 760 aaPredicted RBP17.29■□□□□ 0.36
C11orf54-209ENST00000530620 EHBP1L1Q8N3D4 1523 aa17.28■□□□□ 0.36
C11orf54-209ENST00000530620 CLTCQ00610 1675 aaKnown RBP17.27■□□□□ 0.36
C11orf54-209ENST00000530620 ADGBQ8N7X0 1667 aa17.27■□□□□ 0.36
C11orf54-209ENST00000530620 PLEKHH2Q8IVE3 1493 aa17.26■□□□□ 0.35
C11orf54-209ENST00000530620 MTUS2Q5JR59 1369 aa17.26■□□□□ 0.35
C11orf54-209ENST00000530620 CCNB3Q8WWL7 1395 aa17.26■□□□□ 0.35
C11orf54-209ENST00000530620 KIAA1107Q9UPP5 1409 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms