RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
USP35-207ENST00000530546 SUPT16HQ9Y5B9 1047 aaKnown RBP16.44■□□□□ 0.22
USP35-207ENST00000530546 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
USP35-207ENST00000530546 DAPK1P53355 1430 aa16.42■□□□□ 0.22
USP35-207ENST00000530546 KDM6BO15054 1643 aa16.41■□□□□ 0.22
USP35-207ENST00000530546 FOXD1Q16676 465 aa16.41■□□□□ 0.22
USP35-207ENST00000530546 TSHZ2Q9NRE2 1034 aa16.41■□□□□ 0.22
USP35-207ENST00000530546 ABCC5O15440 1437 aa16.4■□□□□ 0.22
USP35-207ENST00000530546 MPHOSPH9Q99550 1183 aa16.39■□□□□ 0.21
USP35-207ENST00000530546 PTPRGP23470 1445 aa16.38■□□□□ 0.21
USP35-207ENST00000530546 KIF14Q15058 1648 aa16.38■□□□□ 0.21
USP35-207ENST00000530546 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
USP35-207ENST00000530546 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
USP35-207ENST00000530546 GPATCH8Q9UKJ3 1502 aaKnown RBP16.36■□□□□ 0.21
USP35-207ENST00000530546 GCC2Q8IWJ2 1684 aa16.36■□□□□ 0.21
USP35-207ENST00000530546 ATP10BO94823 1461 aa16.36■□□□□ 0.21
USP35-207ENST00000530546 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
USP35-207ENST00000530546 ABCA8O94911 1581 aa16.34■□□□□ 0.21
USP35-207ENST00000530546 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.21
USP35-207ENST00000530546 DENND4BO75064 1496 aaPredicted RBP16.33■□□□□ 0.2
USP35-207ENST00000530546 ROCK1Q13464 1354 aa16.33■□□□□ 0.2
USP35-207ENST00000530546 CHD1O14646 1710 aa16.32■□□□□ 0.2
USP35-207ENST00000530546 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
USP35-207ENST00000530546 ITSN2Q9NZM3 1697 aa16.28■□□□□ 0.2
USP35-207ENST00000530546 ADCY10Q96PN6 1610 aa16.26■□□□□ 0.19
USP35-207ENST00000530546 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
USP35-207ENST00000530546 KCNH8Q96L42 1107 aa16.26■□□□□ 0.19
USP35-207ENST00000530546 NCOA1Q15788 1441 aa16.25■□□□□ 0.19
USP35-207ENST00000530546 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
USP35-207ENST00000530546 ABCC10Q5T3U5 1492 aa16.24■□□□□ 0.19
USP35-207ENST00000530546 ERCC6L2Q5T890 1561 aa16.24■□□□□ 0.19
USP35-207ENST00000530546 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
USP35-207ENST00000530546 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
USP35-207ENST00000530546 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
USP35-207ENST00000530546 ERICH6Q7L0X2 663 aa16.22■□□□□ 0.19
USP35-207ENST00000530546 KDM5BQ9UGL1 1544 aa16.22■□□□□ 0.19
USP35-207ENST00000530546 ANKRD30BQ9BXX2 1392 aa16.21■□□□□ 0.19
USP35-207ENST00000530546 CDC42BPAQ5VT25 1732 aa16.2■□□□□ 0.18
USP35-207ENST00000530546 HSPA5P11021 654 aaKnown RBP16.18■□□□□ 0.18
USP35-207ENST00000530546 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
USP35-207ENST00000530546 PKD2Q13563 968 aa16.18■□□□□ 0.18
USP35-207ENST00000530546 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
USP35-207ENST00000530546 PZPP20742 1482 aa16.17■□□□□ 0.18
USP35-207ENST00000530546 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
USP35-207ENST00000530546 ADGBQ8N7X0 1667 aa16.15■□□□□ 0.18
USP35-207ENST00000530546 SHROOM2Q13796 1616 aa16.15■□□□□ 0.18
USP35-207ENST00000530546 ANP32CO43423 234 aa16.14■□□□□ 0.17
USP35-207ENST00000530546 NBPF8Q3BBV2 869 aa16.14■□□□□ 0.17
USP35-207ENST00000530546 NUP155O75694 1391 aa16.14■□□□□ 0.17
USP35-207ENST00000530546 RPRD2Q5VT52 1461 aaKnown RBP16.14■□□□□ 0.17
USP35-207ENST00000530546 CROCC2H7BZ55 1655 aa16.14■□□□□ 0.17
USP35-207ENST00000530546 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
USP35-207ENST00000530546 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
USP35-207ENST00000530546 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
USP35-207ENST00000530546 ABCC2Q92887 1545 aa16.11■□□□□ 0.17
USP35-207ENST00000530546 KIAA1107Q9UPP5 1409 aa16.11■□□□□ 0.17
USP35-207ENST00000530546 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
USP35-207ENST00000530546 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
USP35-207ENST00000530546 SHANK2Q9UPX8 1470 aa16.09■□□□□ 0.17
USP35-207ENST00000530546 SAMD9LQ8IVG5 1584 aa16.09■□□□□ 0.17
USP35-207ENST00000530546 TTC37Q6PGP7 1564 aa16.08■□□□□ 0.16
USP35-207ENST00000530546 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.16
USP35-207ENST00000530546 TEX14Q8IWB6 1497 aa16.08■□□□□ 0.16
USP35-207ENST00000530546 CCDC141Q6ZP82 1450 aa16.07■□□□□ 0.16
USP35-207ENST00000530546 CDC42BPBQ9Y5S2 1711 aa16.07■□□□□ 0.16
USP35-207ENST00000530546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.07■□□□□ 0.16
USP35-207ENST00000530546 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
USP35-207ENST00000530546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.16
USP35-207ENST00000530546 PREX2Q70Z35 1606 aa16.06■□□□□ 0.16
USP35-207ENST00000530546 SYCP2Q9BX26 1530 aa16.06■□□□□ 0.16
USP35-207ENST00000530546 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
USP35-207ENST00000530546 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
USP35-207ENST00000530546 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
USP35-207ENST00000530546 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.16
USP35-207ENST00000530546 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
USP35-207ENST00000530546 RBM19Q9Y4C8 960 aaKnown RBP16.01■□□□□ 0.15
USP35-207ENST00000530546 EFCAB2Q5VUJ9 269 aa16■□□□□ 0.15
USP35-207ENST00000530546 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
USP35-207ENST00000530546 POLR3GLQ9BT43 218 aa15.99■□□□□ 0.15
USP35-207ENST00000530546 MYO5CQ9NQX4 1742 aa15.97■□□□□ 0.15
USP35-207ENST00000530546 CCDC7Q96M83 1385 aa15.97■□□□□ 0.15
USP35-207ENST00000530546 ARHGEF12Q9NZN5 1544 aa15.97■□□□□ 0.15
USP35-207ENST00000530546 PLCH2O75038 1416 aa15.96■□□□□ 0.15
USP35-207ENST00000530546 UHRF1BP1LA0JNW5 1464 aa15.96■□□□□ 0.15
USP35-207ENST00000530546 DCAF11Q8TEB1 546 aa15.96■□□□□ 0.14
USP35-207ENST00000530546 CNGB1Q14028 1251 aaPredicted RBP15.95■□□□□ 0.14
USP35-207ENST00000530546 PLEKHH2Q8IVE3 1493 aa15.94■□□□□ 0.14
USP35-207ENST00000530546 MYT1LQ9UL68 1186 aa15.94■□□□□ 0.14
USP35-207ENST00000530546 RGL3Q3MIN7 710 aa15.94■□□□□ 0.14
USP35-207ENST00000530546 KIF7Q2M1P5 1343 aa15.94■□□□□ 0.14
USP35-207ENST00000530546 AFAP1Q8N556 730 aa15.93■□□□□ 0.14
USP35-207ENST00000530546 KDM5DQ9BY66 1539 aa15.93■□□□□ 0.14
USP35-207ENST00000530546 FAM135AQ9P2D6 1515 aa15.93■□□□□ 0.14
USP35-207ENST00000530546 CNTLNQ9NXG0 1405 aa15.92■□□□□ 0.14
USP35-207ENST00000530546 TRAPPC8Q9Y2L5 1435 aa15.92■□□□□ 0.14
USP35-207ENST00000530546 USP47Q96K76 1375 aa15.92■□□□□ 0.14
USP35-207ENST00000530546 SPATA31E1Q6ZUB1 1445 aa15.92■□□□□ 0.14
USP35-207ENST00000530546 FKBP8Q14318 412 aa15.91■□□□□ 0.14
USP35-207ENST00000530546 CARD11Q9BXL7 1154 aa15.91■□□□□ 0.14
USP35-207ENST00000530546 SPAG9O60271 1321 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms