RNA–Protein interactions for RNA: ENST00000530546.5

USP35-207, Transcript of ubiquitin specific peptidase 35, humanhuman

TSL 1 (best)

Gene USP35, Length 2,986 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP35-207ENST00000530546 TIMELESSQ9UNS1 1208 aa16.44■□□□□ 0.22
USP35-207ENST00000530546 SUPT16HQ9Y5B9 1047 aaKnown RBP16.44■□□□□ 0.22
USP35-207ENST00000530546 PLEKHD1A6NEE1 506 aa16.42■□□□□ 0.22
USP35-207ENST00000530546 DAPK1P53355 1430 aa16.42■□□□□ 0.22
USP35-207ENST00000530546 KDM6BO15054 1643 aa16.41■□□□□ 0.22
USP35-207ENST00000530546 FOXD1Q16676 465 aa16.41■□□□□ 0.22
USP35-207ENST00000530546 TSHZ2Q9NRE2 1034 aa16.41■□□□□ 0.22
USP35-207ENST00000530546 ABCC5O15440 1437 aa16.4■□□□□ 0.22
USP35-207ENST00000530546 MPHOSPH9Q99550 1183 aa16.39■□□□□ 0.21
USP35-207ENST00000530546 PTPRGP23470 1445 aa16.38■□□□□ 0.21
USP35-207ENST00000530546 KIF14Q15058 1648 aa16.38■□□□□ 0.21
USP35-207ENST00000530546 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
USP35-207ENST00000530546 AKNAQ7Z591 1439 aa16.36■□□□□ 0.21
USP35-207ENST00000530546 GPATCH8Q9UKJ3 1502 aaKnown RBP16.36■□□□□ 0.21
USP35-207ENST00000530546 GCC2Q8IWJ2 1684 aa16.36■□□□□ 0.21
USP35-207ENST00000530546 ATP10BO94823 1461 aa16.36■□□□□ 0.21
USP35-207ENST00000530546 CAMSAP2Q08AD1 1489 aa16.35■□□□□ 0.21
USP35-207ENST00000530546 ABCA8O94911 1581 aa16.34■□□□□ 0.21
USP35-207ENST00000530546 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.21
USP35-207ENST00000530546 DENND4BO75064 1496 aaPredicted RBP16.33■□□□□ 0.2
USP35-207ENST00000530546 ROCK1Q13464 1354 aa16.33■□□□□ 0.2
USP35-207ENST00000530546 CHD1O14646 1710 aa16.32■□□□□ 0.2
USP35-207ENST00000530546 SLC4A1APQ9BWU0 796 aaKnown RBP16.31■□□□□ 0.2
USP35-207ENST00000530546 ITSN2Q9NZM3 1697 aa16.28■□□□□ 0.2
USP35-207ENST00000530546 ADCY10Q96PN6 1610 aa16.26■□□□□ 0.19
USP35-207ENST00000530546 HNRNPMP52272 730 aaKnown RBP eCLIP16.26■□□□□ 0.19
USP35-207ENST00000530546 KCNH8Q96L42 1107 aa16.26■□□□□ 0.19
USP35-207ENST00000530546 NCOA1Q15788 1441 aa16.25■□□□□ 0.19
USP35-207ENST00000530546 L3MBTL2Q969R5 705 aa16.25■□□□□ 0.19
USP35-207ENST00000530546 ABCC10Q5T3U5 1492 aa16.24■□□□□ 0.19
USP35-207ENST00000530546 ERCC6L2Q5T890 1561 aa16.24■□□□□ 0.19
USP35-207ENST00000530546 ANKRD30AQ9BXX3 1397 aa16.23■□□□□ 0.19
USP35-207ENST00000530546 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
USP35-207ENST00000530546 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
USP35-207ENST00000530546 ERICH6Q7L0X2 663 aa16.22■□□□□ 0.19
USP35-207ENST00000530546 KDM5BQ9UGL1 1544 aa16.22■□□□□ 0.19
USP35-207ENST00000530546 ANKRD30BQ9BXX2 1392 aa16.21■□□□□ 0.19
USP35-207ENST00000530546 CDC42BPAQ5VT25 1732 aa16.2■□□□□ 0.18
USP35-207ENST00000530546 HSPA5P11021 654 aaKnown RBP16.18■□□□□ 0.18
USP35-207ENST00000530546 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
USP35-207ENST00000530546 PKD2Q13563 968 aa16.18■□□□□ 0.18
USP35-207ENST00000530546 ANKRD50Q9ULJ7 1429 aa16.18■□□□□ 0.18
USP35-207ENST00000530546 PZPP20742 1482 aa16.17■□□□□ 0.18
USP35-207ENST00000530546 ADGRL2O95490 1459 aa16.16■□□□□ 0.18
USP35-207ENST00000530546 ADGBQ8N7X0 1667 aa16.15■□□□□ 0.18
USP35-207ENST00000530546 SHROOM2Q13796 1616 aa16.15■□□□□ 0.18
USP35-207ENST00000530546 ANP32CO43423 234 aa16.14■□□□□ 0.17
USP35-207ENST00000530546 NBPF8Q3BBV2 869 aa16.14■□□□□ 0.17
USP35-207ENST00000530546 NUP155O75694 1391 aa16.14■□□□□ 0.17
USP35-207ENST00000530546 RPRD2Q5VT52 1461 aaKnown RBP16.14■□□□□ 0.17
USP35-207ENST00000530546 CROCC2H7BZ55 1655 aa16.14■□□□□ 0.17
USP35-207ENST00000530546 EIF4G2P78344 907 aaKnown RBP eCLIP16.14■□□□□ 0.17
USP35-207ENST00000530546 ZNF326Q5BKZ1 582 aaKnown RBP16.13■□□□□ 0.17
USP35-207ENST00000530546 KIF15Q9NS87 1388 aa16.13■□□□□ 0.17
USP35-207ENST00000530546 ABCC2Q92887 1545 aa16.11■□□□□ 0.17
USP35-207ENST00000530546 KIAA1107Q9UPP5 1409 aa16.11■□□□□ 0.17
USP35-207ENST00000530546 MBD5Q9P267 1494 aa16.1■□□□□ 0.17
USP35-207ENST00000530546 ARHGAP5Q13017 1502 aa16.1■□□□□ 0.17
USP35-207ENST00000530546 SHANK2Q9UPX8 1470 aa16.09■□□□□ 0.17
USP35-207ENST00000530546 SAMD9LQ8IVG5 1584 aa16.09■□□□□ 0.17
USP35-207ENST00000530546 TTC37Q6PGP7 1564 aa16.08■□□□□ 0.16
USP35-207ENST00000530546 WASHC2AQ641Q2 1341 aa16.08■□□□□ 0.16
USP35-207ENST00000530546 TEX14Q8IWB6 1497 aa16.08■□□□□ 0.16
USP35-207ENST00000530546 CCDC141Q6ZP82 1450 aa16.07■□□□□ 0.16
USP35-207ENST00000530546 CDC42BPBQ9Y5S2 1711 aa16.07■□□□□ 0.16
USP35-207ENST00000530546 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.07■□□□□ 0.16
USP35-207ENST00000530546 CLASP1Q7Z460 1538 aa16.07■□□□□ 0.16
USP35-207ENST00000530546 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.06■□□□□ 0.16
USP35-207ENST00000530546 PREX2Q70Z35 1606 aa16.06■□□□□ 0.16
USP35-207ENST00000530546 SYCP2Q9BX26 1530 aa16.06■□□□□ 0.16
USP35-207ENST00000530546 RSPH4AQ5TD94 716 aa16.05■□□□□ 0.16
USP35-207ENST00000530546 ARHGEF5Q12774 1597 aa16.04■□□□□ 0.16
USP35-207ENST00000530546 C11orf95C9JLR9 678 aaPredicted RBP16.04■□□□□ 0.16
USP35-207ENST00000530546 KDM2AQ9Y2K7 1162 aa16.02■□□□□ 0.16
USP35-207ENST00000530546 CCER2I3L3R5 266 aa16.01■□□□□ 0.15
USP35-207ENST00000530546 RBM19Q9Y4C8 960 aaKnown RBP16.01■□□□□ 0.15
USP35-207ENST00000530546 EFCAB2Q5VUJ9 269 aa16■□□□□ 0.15
USP35-207ENST00000530546 ZCCHC11Q5TAX3 1644 aaKnown RBP16■□□□□ 0.15
USP35-207ENST00000530546 POLR3GLQ9BT43 218 aa15.99■□□□□ 0.15
USP35-207ENST00000530546 MYO5CQ9NQX4 1742 aa15.97■□□□□ 0.15
USP35-207ENST00000530546 CCDC7Q96M83 1385 aa15.97■□□□□ 0.15
USP35-207ENST00000530546 ARHGEF12Q9NZN5 1544 aa15.97■□□□□ 0.15
USP35-207ENST00000530546 PLCH2O75038 1416 aa15.96■□□□□ 0.15
USP35-207ENST00000530546 UHRF1BP1LA0JNW5 1464 aa15.96■□□□□ 0.15
USP35-207ENST00000530546 DCAF11Q8TEB1 546 aa15.96■□□□□ 0.14
USP35-207ENST00000530546 CNGB1Q14028 1251 aaPredicted RBP15.95■□□□□ 0.14
USP35-207ENST00000530546 PLEKHH2Q8IVE3 1493 aa15.94■□□□□ 0.14
USP35-207ENST00000530546 MYT1LQ9UL68 1186 aa15.94■□□□□ 0.14
USP35-207ENST00000530546 RGL3Q3MIN7 710 aa15.94■□□□□ 0.14
USP35-207ENST00000530546 KIF7Q2M1P5 1343 aa15.94■□□□□ 0.14
USP35-207ENST00000530546 AFAP1Q8N556 730 aa15.93■□□□□ 0.14
USP35-207ENST00000530546 KDM5DQ9BY66 1539 aa15.93■□□□□ 0.14
USP35-207ENST00000530546 FAM135AQ9P2D6 1515 aa15.93■□□□□ 0.14
USP35-207ENST00000530546 CNTLNQ9NXG0 1405 aa15.92■□□□□ 0.14
USP35-207ENST00000530546 TRAPPC8Q9Y2L5 1435 aa15.92■□□□□ 0.14
USP35-207ENST00000530546 USP47Q96K76 1375 aa15.92■□□□□ 0.14
USP35-207ENST00000530546 SPATA31E1Q6ZUB1 1445 aa15.92■□□□□ 0.14
USP35-207ENST00000530546 FKBP8Q14318 412 aa15.91■□□□□ 0.14
USP35-207ENST00000530546 CARD11Q9BXL7 1154 aa15.91■□□□□ 0.14
USP35-207ENST00000530546 SPAG9O60271 1321 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms