RNA–Protein interactions for RNA: ENST00000530513.5

PACSIN3-207, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-207ENST00000530513 POGZQ7Z3K3 1410 aa37.01■■■■□ 3.51
PACSIN3-207ENST00000530513 ATP1B4Q9UN42 357 aaPredicted RBP37■■■■□ 3.51
PACSIN3-207ENST00000530513 MAGI2Q86UL8 1455 aa36.97■■■■□ 3.51
PACSIN3-207ENST00000530513 PCF11O94913 1555 aaKnown RBP36.96■■■■□ 3.51
PACSIN3-207ENST00000530513 SCAPERQ9BY12 1400 aa36.96■■■■□ 3.51
PACSIN3-207ENST00000530513 LMTK3Q96Q04 1460 aa36.91■■■■□ 3.5
PACSIN3-207ENST00000530513 TROQ12816 1431 aaPredicted RBP36.91■■■■□ 3.5
PACSIN3-207ENST00000530513 FER1L4A9Z1Z3 1794 aa36.91■■■■□ 3.5
PACSIN3-207ENST00000530513 ARHGAP5Q13017 1502 aa36.85■■■■□ 3.49
PACSIN3-207ENST00000530513 CDK11AQ9UQ88 783 aaPredicted RBP36.85■■■■□ 3.49
PACSIN3-207ENST00000530513 CDC42BPBQ9Y5S2 1711 aa36.83■■■■□ 3.49
PACSIN3-207ENST00000530513 CLIP1P30622 1438 aa36.83■■■■□ 3.49
PACSIN3-207ENST00000530513 EFCAB2Q5VUJ9 269 aa36.8■■■■□ 3.48
PACSIN3-207ENST00000530513 KDM5CP41229 1560 aa36.79■■■■□ 3.48
PACSIN3-207ENST00000530513 PREX2Q70Z35 1606 aa36.78■■■■□ 3.48
PACSIN3-207ENST00000530513 ZNF518AQ6AHZ1 1483 aa36.77■■■■□ 3.48
PACSIN3-207ENST00000530513 C9orf84Q5VXU9 1444 aa36.76■■■■□ 3.48
PACSIN3-207ENST00000530513 ATP10AO60312 1499 aa36.76■■■■□ 3.48
PACSIN3-207ENST00000530513 CASKIN1Q8WXD9 1431 aa36.76■■■■□ 3.47
PACSIN3-207ENST00000530513 CCDC18Q5T9S5 1454 aa36.75■■■■□ 3.47
PACSIN3-207ENST00000530513 ARHGEF12Q9NZN5 1544 aa36.75■■■■□ 3.47
PACSIN3-207ENST00000530513 MLECQ14165 292 aa36.72■■■■□ 3.47
PACSIN3-207ENST00000530513 PLPPR3Q6T4P5 718 aa36.71■■■■□ 3.47
PACSIN3-207ENST00000530513 DIP2CQ9Y2E4 1556 aa36.69■■■■□ 3.46
PACSIN3-207ENST00000530513 CDC42BPAQ5VT25 1732 aa36.68■■■■□ 3.46
PACSIN3-207ENST00000530513 ITSN2Q9NZM3 1697 aa36.68■■■■□ 3.46
PACSIN3-207ENST00000530513 ABCC1P33527 1531 aa36.68■■■■□ 3.46
PACSIN3-207ENST00000530513 ABCA6Q8N139 1617 aa36.67■■■■□ 3.46
PACSIN3-207ENST00000530513 FYCO1Q9BQS8 1478 aa36.65■■■■□ 3.46
PACSIN3-207ENST00000530513 AFAP1Q8N556 730 aa36.62■■■■□ 3.45
PACSIN3-207ENST00000530513 REREQ9P2R6 1566 aa36.61■■■■□ 3.45
PACSIN3-207ENST00000530513 HSPA2P54652 639 aa36.6■■■■□ 3.45
PACSIN3-207ENST00000530513 PREX1Q8TCU6 1659 aa36.6■■■■□ 3.45
PACSIN3-207ENST00000530513 MLH3Q9UHC1 1453 aa36.56■■■■□ 3.44
PACSIN3-207ENST00000530513 TRAPPC8Q9Y2L5 1435 aa36.55■■■■□ 3.44
PACSIN3-207ENST00000530513 FBXO41Q8TF61 875 aa36.52■■■■□ 3.44
PACSIN3-207ENST00000530513 KIDINS220Q9ULH0 1771 aa36.52■■■■□ 3.44
PACSIN3-207ENST00000530513 SAMD9LQ8IVG5 1584 aa36.49■■■■□ 3.43
PACSIN3-207ENST00000530513 MYT1LQ9UL68 1186 aa36.48■■■■□ 3.43
PACSIN3-207ENST00000530513 C3P01024 1663 aa36.45■■■■□ 3.42
PACSIN3-207ENST00000530513 AGLP35573 1532 aa36.44■■■■□ 3.42
PACSIN3-207ENST00000530513 CEBPAP49715 358 aaPredicted RBP36.43■■■■□ 3.42
PACSIN3-207ENST00000530513 SYCP2Q9BX26 1530 aa36.42■■■■□ 3.42
PACSIN3-207ENST00000530513 GPATCH8Q9UKJ3 1502 aaKnown RBP36.39■■■■□ 3.42
PACSIN3-207ENST00000530513 STRCQ7RTU9 1775 aa36.34■■■■□ 3.41
PACSIN3-207ENST00000530513 SETD1BQ9UPS6 1966 aaKnown RBP36.31■■■■□ 3.4
PACSIN3-207ENST00000530513 ZNF777Q9ULD5 760 aaPredicted RBP36.3■■■■□ 3.4
PACSIN3-207ENST00000530513 UHRF1BP1Q6BDS2 1440 aa36.3■■■■□ 3.4
PACSIN3-207ENST00000530513 INO80Q9ULG1 1556 aaPredicted RBP36.29■■■■□ 3.4
PACSIN3-207ENST00000530513 SUPT6HQ7KZ85 1726 aaKnown RBP36.28■■■■□ 3.4
PACSIN3-207ENST00000530513 ATP7AQ04656 1500 aa36.26■■■■□ 3.4
PACSIN3-207ENST00000530513 MROH2AA6NES4 1674 aa36.23■■■■□ 3.39
PACSIN3-207ENST00000530513 TIAM1Q13009 1591 aa36.23■■■■□ 3.39
PACSIN3-207ENST00000530513 PLXNC1O60486 1568 aa36.21■■■■□ 3.39
PACSIN3-207ENST00000530513 MTUS2Q5JR59 1369 aa36.21■■■■□ 3.39
PACSIN3-207ENST00000530513 PLEKHH2Q8IVE3 1493 aa36.21■■■■□ 3.39
PACSIN3-207ENST00000530513 EHBP1L1Q8N3D4 1523 aa36.2■■■■□ 3.39
PACSIN3-207ENST00000530513 CCNB3Q8WWL7 1395 aa36.2■■■■□ 3.39
PACSIN3-207ENST00000530513 KIAA1107Q9UPP5 1409 aa36.19■■■■□ 3.38
PACSIN3-207ENST00000530513 HNRNPMP52272 730 aaKnown RBP eCLIP36.19■■■■□ 3.38
PACSIN3-207ENST00000530513 CNTLNQ9NXG0 1405 aa36.18■■■■□ 3.38
PACSIN3-207ENST00000530513 SPAG9O60271 1321 aaKnown RBP36.18■■■■□ 3.38
PACSIN3-207ENST00000530513 ESF1Q9H501 851 aaKnown RBP36.16■■■■□ 3.38
PACSIN3-207ENST00000530513 CFDP1Q9UEE9 299 aaPredicted RBP36.15■■■■□ 3.38
PACSIN3-207ENST00000530513 CERKQ8TCT0 537 aa36.14■■■■□ 3.38
PACSIN3-207ENST00000530513 CLTCQ00610 1675 aaKnown RBP36.13■■■■□ 3.37
PACSIN3-207ENST00000530513 CEP162Q5TB80 1403 aa36.13■■■■□ 3.37
PACSIN3-207ENST00000530513 ADGBQ8N7X0 1667 aa36.11■■■■□ 3.37
PACSIN3-207ENST00000530513 A2MP01023 1474 aa36.1■■■■□ 3.37
PACSIN3-207ENST00000530513 NPATQ14207 1427 aa36.03■■■■□ 3.36
PACSIN3-207ENST00000530513 MBD5Q9P267 1494 aa36.02■■■■□ 3.36
PACSIN3-207ENST00000530513 ZNF644Q9H582 1327 aaPredicted RBP36.02■■■■□ 3.36
PACSIN3-207ENST00000530513 DMRT2Q9Y5R5 561 aa36.01■■■■□ 3.36
PACSIN3-207ENST00000530513 MYO3AQ8NEV4 1616 aa36.01■■■■□ 3.35
PACSIN3-207ENST00000530513 ZNF142P52746 1687 aaPredicted RBP35.99■■■■□ 3.35
PACSIN3-207ENST00000530513 PTPRTO14522 1441 aa35.99■■■■□ 3.35
PACSIN3-207ENST00000530513 NCOA1Q15788 1441 aa35.99■■■■□ 3.35
PACSIN3-207ENST00000530513 ZMYM3Q14202 1370 aa35.98■■■■□ 3.35
PACSIN3-207ENST00000530513 CAMSAP1Q5T5Y3 1602 aa35.97■■■■□ 3.35
PACSIN3-207ENST00000530513 NCOA2Q15596 1464 aa35.93■■■■□ 3.34
PACSIN3-207ENST00000530513 CAMSAP2Q08AD1 1489 aa35.9■■■■□ 3.34
PACSIN3-207ENST00000530513 RTEL1-TNFRSF6BF6WH68 1400 aa35.89■■■■□ 3.34
PACSIN3-207ENST00000530513 LTBP4Q8N2S1 1624 aa35.88■■■■□ 3.33
PACSIN3-207ENST00000530513 PTPRKQ15262 1439 aa35.88■■■■□ 3.33
PACSIN3-207ENST00000530513 CEP170BQ9Y4F5 1589 aaPredicted RBP35.88■■■■□ 3.33
PACSIN3-207ENST00000530513 GGT6Q6P531 493 aa35.87■■■■□ 3.33
PACSIN3-207ENST00000530513 CCDC141Q6ZP82 1450 aa35.86■■■■□ 3.33
PACSIN3-207ENST00000530513 DHX29Q7Z478 1369 aaKnown RBP35.77■■■■□ 3.32
PACSIN3-207ENST00000530513 ARHGEF5Q12774 1597 aa35.77■■■■□ 3.32
PACSIN3-207ENST00000530513 PLA2R1Q13018 1463 aa35.76■■■■□ 3.32
PACSIN3-207ENST00000530513 VPS8Q8N3P4 1428 aa35.75■■■■□ 3.31
PACSIN3-207ENST00000530513 PPP6R1Q9UPN7 881 aa35.73■■■■□ 3.31
PACSIN3-207ENST00000530513 LRRC9Q6ZRR7 1453 aa35.73■■■■□ 3.31
PACSIN3-207ENST00000530513 KDM5DQ9BY66 1539 aa35.73■■■■□ 3.31
PACSIN3-207ENST00000530513 NCKAP5LQ9HCH0 1330 aa35.72■■■■□ 3.31
PACSIN3-207ENST00000530513 TCOF1Q13428 1488 aaKnown RBP35.72■■■■□ 3.31
PACSIN3-207ENST00000530513 DNMT1P26358 1616 aaKnown RBP35.7■■■■□ 3.31
PACSIN3-207ENST00000530513 IQSEC2Q5JU85 1478 aa35.7■■■■□ 3.31
PACSIN3-207ENST00000530513 FAM135AQ9P2D6 1515 aa35.7■■■■□ 3.31
PACSIN3-207ENST00000530513 A2ML1A8K2U0 1454 aa35.67■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms