RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 HECW1Q76N89 1606 aa24.72■■□□□ 1.55
CAPN1-219ENST00000530495 CDK11AQ9UQ88 783 aaPredicted RBP24.72■■□□□ 1.55
CAPN1-219ENST00000530495 SIGLEC1Q9BZZ2 1709 aa24.72■■□□□ 1.55
CAPN1-219ENST00000530495 EFCAB2Q5VUJ9 269 aa24.7■■□□□ 1.54
CAPN1-219ENST00000530495 FBXO41Q8TF61 875 aa24.7■■□□□ 1.54
CAPN1-219ENST00000530495 CHIC1Q5VXU3 224 aa24.69■■□□□ 1.54
CAPN1-219ENST00000530495 MYO5CQ9NQX4 1742 aa24.68■■□□□ 1.54
CAPN1-219ENST00000530495 ATP10AO60312 1499 aa24.64■■□□□ 1.53
CAPN1-219ENST00000530495 MLECQ14165 292 aa24.63■■□□□ 1.53
CAPN1-219ENST00000530495 TROQ12816 1431 aaPredicted RBP24.62■■□□□ 1.53
CAPN1-219ENST00000530495 KIF14Q15058 1648 aa24.62■■□□□ 1.53
CAPN1-219ENST00000530495 PLPPR3Q6T4P5 718 aa24.61■■□□□ 1.53
CAPN1-219ENST00000530495 FER1L4A9Z1Z3 1794 aa24.6■■□□□ 1.53
CAPN1-219ENST00000530495 LRRIQ1Q96JM4 1722 aa24.59■■□□□ 1.53
CAPN1-219ENST00000530495 HSPA2P54652 639 aa24.59■■□□□ 1.53
CAPN1-219ENST00000530495 C9orf84Q5VXU9 1444 aa24.58■■□□□ 1.53
CAPN1-219ENST00000530495 CLIP1P30622 1438 aa24.57■■□□□ 1.52
CAPN1-219ENST00000530495 ZNF518AQ6AHZ1 1483 aa24.57■■□□□ 1.52
CAPN1-219ENST00000530495 ARHGEF12Q9NZN5 1544 aa24.56■■□□□ 1.52
CAPN1-219ENST00000530495 AFAP1Q8N556 730 aa24.56■■□□□ 1.52
CAPN1-219ENST00000530495 ARHGAP5Q13017 1502 aa24.56■■□□□ 1.52
CAPN1-219ENST00000530495 KDM5CP41229 1560 aa24.53■■□□□ 1.52
CAPN1-219ENST00000530495 CDC42BPBQ9Y5S2 1711 aa24.52■■□□□ 1.52
CAPN1-219ENST00000530495 CASKIN1Q8WXD9 1431 aa24.48■■□□□ 1.51
CAPN1-219ENST00000530495 CCDC18Q5T9S5 1454 aa24.46■■□□□ 1.51
CAPN1-219ENST00000530495 CEBPAP49715 358 aaPredicted RBP24.46■■□□□ 1.51
CAPN1-219ENST00000530495 MYT1LQ9UL68 1186 aa24.46■■□□□ 1.51
CAPN1-219ENST00000530495 MLH3Q9UHC1 1453 aa24.45■■□□□ 1.51
CAPN1-219ENST00000530495 PREX1Q8TCU6 1659 aa24.44■■□□□ 1.5
CAPN1-219ENST00000530495 PREX2Q70Z35 1606 aa24.44■■□□□ 1.5
CAPN1-219ENST00000530495 REREQ9P2R6 1566 aa24.44■■□□□ 1.5
CAPN1-219ENST00000530495 DIP2CQ9Y2E4 1556 aa24.44■■□□□ 1.5
CAPN1-219ENST00000530495 ABCA6Q8N139 1617 aa24.4■■□□□ 1.5
CAPN1-219ENST00000530495 TRAPPC8Q9Y2L5 1435 aa24.4■■□□□ 1.5
CAPN1-219ENST00000530495 ABCC1P33527 1531 aa24.4■■□□□ 1.5
CAPN1-219ENST00000530495 SETD1BQ9UPS6 1966 aaKnown RBP24.4■■□□□ 1.5
CAPN1-219ENST00000530495 CERKQ8TCT0 537 aa24.39■■□□□ 1.49
CAPN1-219ENST00000530495 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
CAPN1-219ENST00000530495 AGLP35573 1532 aa24.37■■□□□ 1.49
CAPN1-219ENST00000530495 CDC42BPAQ5VT25 1732 aa24.37■■□□□ 1.49
CAPN1-219ENST00000530495 FYCO1Q9BQS8 1478 aa24.36■■□□□ 1.49
CAPN1-219ENST00000530495 DMRT2Q9Y5R5 561 aa24.33■■□□□ 1.49
CAPN1-219ENST00000530495 KIDINS220Q9ULH0 1771 aa24.33■■□□□ 1.49
CAPN1-219ENST00000530495 UHRF1BP1Q6BDS2 1440 aa24.33■■□□□ 1.49
CAPN1-219ENST00000530495 STRCQ7RTU9 1775 aa24.32■■□□□ 1.48
CAPN1-219ENST00000530495 C3P01024 1663 aa24.31■■□□□ 1.48
CAPN1-219ENST00000530495 ESF1Q9H501 851 aaKnown RBP24.3■■□□□ 1.48
CAPN1-219ENST00000530495 ZNF777Q9ULD5 760 aaPredicted RBP24.28■■□□□ 1.48
CAPN1-219ENST00000530495 GPATCH8Q9UKJ3 1502 aaKnown RBP24.27■■□□□ 1.48
CAPN1-219ENST00000530495 SAMD9LQ8IVG5 1584 aa24.26■■□□□ 1.47
CAPN1-219ENST00000530495 HNRNPMP52272 730 aaKnown RBP eCLIP24.24■■□□□ 1.47
CAPN1-219ENST00000530495 CNTLNQ9NXG0 1405 aa24.24■■□□□ 1.47
CAPN1-219ENST00000530495 SPAG9O60271 1321 aaKnown RBP24.22■■□□□ 1.47
CAPN1-219ENST00000530495 SYCP2Q9BX26 1530 aa24.21■■□□□ 1.47
CAPN1-219ENST00000530495 KIAA1107Q9UPP5 1409 aa24.21■■□□□ 1.47
CAPN1-219ENST00000530495 CFDP1Q9UEE9 299 aaPredicted RBP24.2■■□□□ 1.46
CAPN1-219ENST00000530495 PTPRTO14522 1441 aa24.19■■□□□ 1.46
CAPN1-219ENST00000530495 PLEKHH2Q8IVE3 1493 aa24.18■■□□□ 1.46
CAPN1-219ENST00000530495 MROH2AA6NES4 1674 aa24.17■■□□□ 1.46
CAPN1-219ENST00000530495 CCNB3Q8WWL7 1395 aa24.16■■□□□ 1.46
CAPN1-219ENST00000530495 SUPT6HQ7KZ85 1726 aaKnown RBP24.16■■□□□ 1.46
CAPN1-219ENST00000530495 ZMYM3Q14202 1370 aa24.16■■□□□ 1.46
CAPN1-219ENST00000530495 ATP7AQ04656 1500 aa24.15■■□□□ 1.46
CAPN1-219ENST00000530495 NPATQ14207 1427 aa24.15■■□□□ 1.46
CAPN1-219ENST00000530495 MTUS2Q5JR59 1369 aa24.14■■□□□ 1.45
CAPN1-219ENST00000530495 INO80Q9ULG1 1556 aaPredicted RBP24.12■■□□□ 1.45
CAPN1-219ENST00000530495 A2MP01023 1474 aa24.11■■□□□ 1.45
CAPN1-219ENST00000530495 PLXNC1O60486 1568 aa24.11■■□□□ 1.45
CAPN1-219ENST00000530495 NCOA1Q15788 1441 aa24.1■■□□□ 1.45
CAPN1-219ENST00000530495 CLTCQ00610 1675 aaKnown RBP24.07■■□□□ 1.44
CAPN1-219ENST00000530495 ZNF644Q9H582 1327 aaPredicted RBP24.07■■□□□ 1.44
CAPN1-219ENST00000530495 PPP6R1Q9UPN7 881 aa24.06■■□□□ 1.44
CAPN1-219ENST00000530495 LTBP4Q8N2S1 1624 aa24.06■■□□□ 1.44
CAPN1-219ENST00000530495 GGT6Q6P531 493 aa24.05■■□□□ 1.44
CAPN1-219ENST00000530495 CAMSAP1Q5T5Y3 1602 aa24.05■■□□□ 1.44
CAPN1-219ENST00000530495 ADGBQ8N7X0 1667 aa24.05■■□□□ 1.44
CAPN1-219ENST00000530495 TIAM1Q13009 1591 aa24.04■■□□□ 1.44
CAPN1-219ENST00000530495 MBD5Q9P267 1494 aa24.04■■□□□ 1.44
CAPN1-219ENST00000530495 EHBP1L1Q8N3D4 1523 aa24.02■■□□□ 1.44
CAPN1-219ENST00000530495 PTPRKQ15262 1439 aa24.01■■□□□ 1.43
CAPN1-219ENST00000530495 RTEL1-TNFRSF6BF6WH68 1400 aa24.01■■□□□ 1.43
CAPN1-219ENST00000530495 CEP162Q5TB80 1403 aa24.01■■□□□ 1.43
CAPN1-219ENST00000530495 NCKAP5LQ9HCH0 1330 aa23.99■■□□□ 1.43
CAPN1-219ENST00000530495 IQSEC2Q5JU85 1478 aa23.99■■□□□ 1.43
CAPN1-219ENST00000530495 MYO3AQ8NEV4 1616 aa23.98■■□□□ 1.43
CAPN1-219ENST00000530495 ZNF142P52746 1687 aaPredicted RBP23.98■■□□□ 1.43
CAPN1-219ENST00000530495 DHX29Q7Z478 1369 aaKnown RBP23.96■■□□□ 1.43
CAPN1-219ENST00000530495 PKD2Q13563 968 aa23.96■■□□□ 1.43
CAPN1-219ENST00000530495 PLA2R1Q13018 1463 aa23.95■■□□□ 1.42
CAPN1-219ENST00000530495 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.42
CAPN1-219ENST00000530495 RSPH4AQ5TD94 716 aa23.93■■□□□ 1.42
CAPN1-219ENST00000530495 TCOF1Q13428 1488 aaKnown RBP23.91■■□□□ 1.42
CAPN1-219ENST00000530495 DISP3Q9P2K9 1392 aa23.9■■□□□ 1.42
CAPN1-219ENST00000530495 ZNF335Q9H4Z2 1342 aaPredicted RBP23.89■■□□□ 1.42
CAPN1-219ENST00000530495 NCOA2Q15596 1464 aa23.89■■□□□ 1.42
CAPN1-219ENST00000530495 CCDC141Q6ZP82 1450 aa23.88■■□□□ 1.41
CAPN1-219ENST00000530495 KIF3BO15066 747 aa23.88■■□□□ 1.41
CAPN1-219ENST00000530495 A2ML1A8K2U0 1454 aa23.87■■□□□ 1.41
CAPN1-219ENST00000530495 CAMSAP2Q08AD1 1489 aa23.87■■□□□ 1.41
CAPN1-219ENST00000530495 DNMT1P26358 1616 aaKnown RBP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms