RNA–Protein interactions for RNA: ENST00000530131.5

RDX-209, Transcript of radixin, humanhuman

TSL 2

Gene RDX, Length 1,911 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDX-209ENST00000530131 MYO5CQ9NQX4 1742 aa22.85■■□□□ 1.25
RDX-209ENST00000530131 RAB3GAP2Q9H2M9 1393 aa22.85■■□□□ 1.25
RDX-209ENST00000530131 DAPK1P53355 1430 aa22.84■■□□□ 1.25
RDX-209ENST00000530131 HFM1A2PYH4 1435 aa22.83■■□□□ 1.25
RDX-209ENST00000530131 ABCC5O15440 1437 aa22.82■■□□□ 1.24
RDX-209ENST00000530131 ZEB1P37275 1124 aaPredicted RBP22.82■■□□□ 1.24
RDX-209ENST00000530131 AKNAQ7Z591 1439 aa22.81■■□□□ 1.24
RDX-209ENST00000530131 CROCC2H7BZ55 1655 aa22.81■■□□□ 1.24
RDX-209ENST00000530131 ASXL2Q76L83 1435 aa22.8■■□□□ 1.24
RDX-209ENST00000530131 SAMD9LQ8IVG5 1584 aa22.8■■□□□ 1.24
RDX-209ENST00000530131 GCC2Q8IWJ2 1684 aa22.79■■□□□ 1.24
RDX-209ENST00000530131 NAIPQ13075 1403 aa22.79■■□□□ 1.24
RDX-209ENST00000530131 KCNH8Q96L42 1107 aa22.78■■□□□ 1.24
RDX-209ENST00000530131 DHX57Q6P158 1386 aaKnown RBP22.78■■□□□ 1.24
RDX-209ENST00000530131 ABCA9Q8IUA7 1624 aa22.76■■□□□ 1.23
RDX-209ENST00000530131 ARHGAP5Q13017 1502 aa22.75■■□□□ 1.23
RDX-209ENST00000530131 ZNF777Q9ULD5 760 aaPredicted RBP22.75■■□□□ 1.23
RDX-209ENST00000530131 ARHGEF5Q12774 1597 aa22.75■■□□□ 1.23
RDX-209ENST00000530131 PLCH2O75038 1416 aa22.74■■□□□ 1.23
RDX-209ENST00000530131 ROCK1Q13464 1354 aa22.74■■□□□ 1.23
RDX-209ENST00000530131 ARAP3Q8WWN8 1544 aa22.74■■□□□ 1.23
RDX-209ENST00000530131 ADGBQ8N7X0 1667 aa22.73■■□□□ 1.23
RDX-209ENST00000530131 MBD5Q9P267 1494 aa22.72■■□□□ 1.23
RDX-209ENST00000530131 NPM1P06748 294 aaKnown RBP eCLIP22.71■■□□□ 1.23
RDX-209ENST00000530131 CHIC2Q9UKJ5 165 aa22.71■■□□□ 1.23
RDX-209ENST00000530131 SHANK2Q9UPX8 1470 aa22.71■■□□□ 1.23
RDX-209ENST00000530131 ADGRL2O95490 1459 aa22.7■■□□□ 1.22
RDX-209ENST00000530131 CYB5RLQ6IPT4 315 aa22.68■■□□□ 1.22
RDX-209ENST00000530131 MAPKBP1O60336 1514 aa22.68■■□□□ 1.22
RDX-209ENST00000530131 SYCP2Q9BX26 1530 aa22.68■■□□□ 1.22
RDX-209ENST00000530131 KDM6BO15054 1643 aa22.67■■□□□ 1.22
RDX-209ENST00000530131 RRP7BPQ9NSQ0 103 aa22.67■■□□□ 1.22
RDX-209ENST00000530131 KIAA1107Q9UPP5 1409 aa22.66■■□□□ 1.22
RDX-209ENST00000530131 PLEKHH2Q8IVE3 1493 aa22.66■■□□□ 1.22
RDX-209ENST00000530131 CLSPNQ9HAW4 1339 aa22.65■■□□□ 1.22
RDX-209ENST00000530131 CCDC141Q6ZP82 1450 aa22.65■■□□□ 1.22
RDX-209ENST00000530131 ABCC1P33527 1531 aa22.64■■□□□ 1.22
RDX-209ENST00000530131 NCOA1Q15788 1441 aa22.64■■□□□ 1.21
RDX-209ENST00000530131 C9orf84Q5VXU9 1444 aa22.63■■□□□ 1.21
RDX-209ENST00000530131 HNRNPMP52272 730 aaKnown RBP eCLIP22.63■■□□□ 1.21
RDX-209ENST00000530131 ARHGEF12Q9NZN5 1544 aa22.62■■□□□ 1.21
RDX-209ENST00000530131 EFCAB2Q5VUJ9 269 aa22.61■■□□□ 1.21
RDX-209ENST00000530131 MAST1Q9Y2H9 1570 aa22.61■■□□□ 1.21
RDX-209ENST00000530131 RSPH4AQ5TD94 716 aa22.59■■□□□ 1.21
RDX-209ENST00000530131 ANKRD30AQ9BXX3 1397 aa22.58■■□□□ 1.2
RDX-209ENST00000530131 FANCAO15360 1455 aa22.57■■□□□ 1.2
RDX-209ENST00000530131 TSPY4P0CV99 314 aa22.53■■□□□ 1.2
RDX-209ENST00000530131 TSPY10P0CW01 314 aa22.53■■□□□ 1.2
RDX-209ENST00000530131 PLXNC1O60486 1568 aa22.52■■□□□ 1.2
RDX-209ENST00000530131 GLI2P10070 1586 aa22.51■■□□□ 1.19
RDX-209ENST00000530131 CD109Q6YHK3 1445 aa22.51■■□□□ 1.19
RDX-209ENST00000530131 TRAPPC8Q9Y2L5 1435 aa22.51■■□□□ 1.19
RDX-209ENST00000530131 MAP3K4Q9Y6R4 1608 aa22.5■■□□□ 1.19
RDX-209ENST00000530131 CFAP74Q9C0B2 1584 aa22.49■■□□□ 1.19
RDX-209ENST00000530131 ACIN1Q9UKV3 1341 aaKnown RBP22.47■■□□□ 1.19
RDX-209ENST00000530131 KIF15Q9NS87 1388 aa22.47■■□□□ 1.19
RDX-209ENST00000530131 ANKRD50Q9ULJ7 1429 aa22.47■■□□□ 1.19
RDX-209ENST00000530131 ADGRL1O94910 1474 aa22.47■■□□□ 1.19
RDX-209ENST00000530131 DENND4BO75064 1496 aaPredicted RBP22.47■■□□□ 1.19
RDX-209ENST00000530131 DIP2BQ9P265 1576 aa22.46■■□□□ 1.19
RDX-209ENST00000530131 ZFYVE16Q7Z3T8 1539 aa22.43■■□□□ 1.18
RDX-209ENST00000530131 SCAPERQ9BY12 1400 aa22.42■■□□□ 1.18
RDX-209ENST00000530131 INO80Q9ULG1 1556 aaPredicted RBP22.42■■□□□ 1.18
RDX-209ENST00000530131 RTEL1-TNFRSF6BF6WH68 1400 aa22.41■■□□□ 1.18
RDX-209ENST00000530131 NEO1Q92859 1461 aa22.4■■□□□ 1.18
RDX-209ENST00000530131 TRIM52Q96A61 297 aa22.39■■□□□ 1.18
RDX-209ENST00000530131 PZPP20742 1482 aa22.39■■□□□ 1.17
RDX-209ENST00000530131 DUOX2Q9NRD8 1548 aa22.38■■□□□ 1.17
RDX-209ENST00000530131 AFAP1Q8N556 730 aa22.38■■□□□ 1.17
RDX-209ENST00000530131 KDM5DQ9BY66 1539 aa22.38■■□□□ 1.17
RDX-209ENST00000530131 ATP7AQ04656 1500 aa22.37■■□□□ 1.17
RDX-209ENST00000530131 SPAG9O60271 1321 aaKnown RBP22.36■■□□□ 1.17
RDX-209ENST00000530131 MPHOSPH9Q99550 1183 aa22.35■■□□□ 1.17
RDX-209ENST00000530131 KDM5CP41229 1560 aa22.35■■□□□ 1.17
RDX-209ENST00000530131 ZNF518AQ6AHZ1 1483 aa22.35■■□□□ 1.17
RDX-209ENST00000530131 POGZQ7Z3K3 1410 aa22.35■■□□□ 1.17
RDX-209ENST00000530131 UNC13BO14795 1591 aa22.34■■□□□ 1.17
RDX-209ENST00000530131 PPRC1Q5VV67 1664 aaKnown RBP22.33■■□□□ 1.17
RDX-209ENST00000530131 ERBINQ96RT1 1412 aa22.33■■□□□ 1.17
RDX-209ENST00000530131 KIF13AQ9H1H9 1805 aa22.33■■□□□ 1.16
RDX-209ENST00000530131 KIDINS220Q9ULH0 1771 aa22.32■■□□□ 1.16
RDX-209ENST00000530131 FAM69CQ0P6D2 419 aa22.31■■□□□ 1.16
RDX-209ENST00000530131 SIN3AQ96ST3 1273 aa22.31■■□□□ 1.16
RDX-209ENST00000530131 MAGI2Q86UL8 1455 aa22.28■■□□□ 1.16
RDX-209ENST00000530131 RICTORQ6R327 1708 aa22.27■■□□□ 1.16
RDX-209ENST00000530131 NUP155O75694 1391 aa22.26■■□□□ 1.15
RDX-209ENST00000530131 SLC4A1APQ9BWU0 796 aaKnown RBP22.26■■□□□ 1.15
RDX-209ENST00000530131 TSPOAP1O95153 1857 aa22.26■■□□□ 1.15
RDX-209ENST00000530131 HECW2Q9P2P5 1572 aa22.26■■□□□ 1.15
RDX-209ENST00000530131 MLH3Q9UHC1 1453 aa22.25■■□□□ 1.15
RDX-209ENST00000530131 ANKRD30BQ9BXX2 1392 aa22.25■■□□□ 1.15
RDX-209ENST00000530131 FAM135AQ9P2D6 1515 aa22.24■■□□□ 1.15
RDX-209ENST00000530131 IQGAP3Q86VI3 1631 aa22.24■■□□□ 1.15
RDX-209ENST00000530131 TIMELESSQ9UNS1 1208 aa22.23■■□□□ 1.15
RDX-209ENST00000530131 DEPDC5O75140 1603 aa22.22■■□□□ 1.15
RDX-209ENST00000530131 EIF2AK4Q9P2K8 1649 aaKnown RBP22.22■■□□□ 1.15
RDX-209ENST00000530131 NEUROD1Q13562 356 aa22.22■■□□□ 1.15
RDX-209ENST00000530131 FRMPD1Q5SYB0 1578 aa22.22■■□□□ 1.15
RDX-209ENST00000530131 FOXD1Q16676 465 aa22.21■■□□□ 1.15
RDX-209ENST00000530131 TEX14Q8IWB6 1497 aa22.21■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms