RNA–Protein interactions for RNA: ENST00000530005.5

SLC43A3-217, Transcript of solute carrier family 43 member 3, humanhuman

TSL 1 (best)

Gene SLC43A3, Length 1,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC43A3-217ENST00000530005 ARHGAP5Q13017 1502 aa30.92■■■□□ 2.54
SLC43A3-217ENST00000530005 PREX2Q70Z35 1606 aa30.92■■■□□ 2.54
SLC43A3-217ENST00000530005 SCAPERQ9BY12 1400 aa30.92■■■□□ 2.54
SLC43A3-217ENST00000530005 CDC42BPAQ5VT25 1732 aa30.9■■■□□ 2.54
SLC43A3-217ENST00000530005 ZMYM4Q5VZL5 1548 aa30.89■■■□□ 2.54
SLC43A3-217ENST00000530005 POGZQ7Z3K3 1410 aa30.89■■■□□ 2.53
SLC43A3-217ENST00000530005 MTUS2Q5JR59 1369 aa30.88■■■□□ 2.53
SLC43A3-217ENST00000530005 GPATCH8Q9UKJ3 1502 aaKnown RBP30.84■■■□□ 2.53
SLC43A3-217ENST00000530005 EHBP1L1Q8N3D4 1523 aa30.84■■■□□ 2.53
SLC43A3-217ENST00000530005 ARHGEF40Q8TER5 1519 aa30.84■■■□□ 2.53
SLC43A3-217ENST00000530005 TIAM1Q13009 1591 aa30.8■■■□□ 2.52
SLC43A3-217ENST00000530005 MAGI2Q86UL8 1455 aa30.8■■■□□ 2.52
SLC43A3-217ENST00000530005 ABCC1P33527 1531 aa30.79■■■□□ 2.52
SLC43A3-217ENST00000530005 ARHGEF12Q9NZN5 1544 aa30.78■■■□□ 2.52
SLC43A3-217ENST00000530005 YEATS2Q9ULM3 1422 aa30.77■■■□□ 2.52
SLC43A3-217ENST00000530005 KDM5CP41229 1560 aa30.76■■■□□ 2.51
SLC43A3-217ENST00000530005 ZFYVE16Q7Z3T8 1539 aa30.76■■■□□ 2.51
SLC43A3-217ENST00000530005 ZNF518AQ6AHZ1 1483 aa30.76■■■□□ 2.51
SLC43A3-217ENST00000530005 CCNB3Q8WWL7 1395 aa30.74■■■□□ 2.51
SLC43A3-217ENST00000530005 SAMD9LQ8IVG5 1584 aa30.73■■■□□ 2.51
SLC43A3-217ENST00000530005 AFAP1Q8N556 730 aa30.73■■■□□ 2.51
SLC43A3-217ENST00000530005 MAP3K1Q13233 1512 aa30.72■■■□□ 2.51
SLC43A3-217ENST00000530005 ITSN2Q9NZM3 1697 aa30.71■■■□□ 2.51
SLC43A3-217ENST00000530005 TRAPPC8Q9Y2L5 1435 aa30.71■■■□□ 2.51
SLC43A3-217ENST00000530005 LRRC9Q6ZRR7 1453 aa30.68■■■□□ 2.5
SLC43A3-217ENST00000530005 SIGLEC1Q9BZZ2 1709 aa30.67■■■□□ 2.5
SLC43A3-217ENST00000530005 CFDP1Q9UEE9 299 aaPredicted RBP30.67■■■□□ 2.5
SLC43A3-217ENST00000530005 NCOA2Q15596 1464 aa30.67■■■□□ 2.5
SLC43A3-217ENST00000530005 SUPT6HQ7KZ85 1726 aaKnown RBP30.66■■■□□ 2.5
SLC43A3-217ENST00000530005 ADAMTSL3P82987 1691 aa30.65■■■□□ 2.5
SLC43A3-217ENST00000530005 ZNF777Q9ULD5 760 aaPredicted RBP30.64■■■□□ 2.5
SLC43A3-217ENST00000530005 BCORL1Q5H9F3 1711 aa30.64■■■□□ 2.5
SLC43A3-217ENST00000530005 KIAA1107Q9UPP5 1409 aa30.64■■■□□ 2.5
SLC43A3-217ENST00000530005 MLH3Q9UHC1 1453 aa30.64■■■□□ 2.49
SLC43A3-217ENST00000530005 SYCP2Q9BX26 1530 aa30.63■■■□□ 2.49
SLC43A3-217ENST00000530005 HECW2Q9P2P5 1572 aa30.63■■■□□ 2.49
SLC43A3-217ENST00000530005 ATP10AO60312 1499 aa30.62■■■□□ 2.49
SLC43A3-217ENST00000530005 KANK4Q5T7N3 995 aaPredicted RBP30.62■■■□□ 2.49
SLC43A3-217ENST00000530005 PLEKHH2Q8IVE3 1493 aa30.6■■■□□ 2.49
SLC43A3-217ENST00000530005 ARID4BQ4LE39 1312 aaPredicted RBP30.59■■■□□ 2.49
SLC43A3-217ENST00000530005 HNRNPMP52272 730 aaKnown RBP eCLIP30.57■■■□□ 2.485e-6■■■■□ 20.3
SLC43A3-217ENST00000530005 C9orf84Q5VXU9 1444 aa30.57■■■□□ 2.48
SLC43A3-217ENST00000530005 DIP2CQ9Y2E4 1556 aa30.57■■■□□ 2.48
SLC43A3-217ENST00000530005 ZNF644Q9H582 1327 aaPredicted RBP30.56■■■□□ 2.48
SLC43A3-217ENST00000530005 ABCA6Q8N139 1617 aa30.55■■■□□ 2.48
SLC43A3-217ENST00000530005 KIDINS220Q9ULH0 1771 aa30.55■■■□□ 2.48
SLC43A3-217ENST00000530005 MBD5Q9P267 1494 aa30.52■■■□□ 2.48
SLC43A3-217ENST00000530005 REREQ9P2R6 1566 aa30.52■■■□□ 2.48
SLC43A3-217ENST00000530005 MADDQ8WXG6 1647 aa30.51■■■□□ 2.47
SLC43A3-217ENST00000530005 PTPRMP28827 1452 aa30.47■■■□□ 2.47
SLC43A3-217ENST00000530005 MYT1LQ9UL68 1186 aa30.47■■■□□ 2.47
SLC43A3-217ENST00000530005 SPAG9O60271 1321 aaKnown RBP30.45■■■□□ 2.47
SLC43A3-217ENST00000530005 INO80Q9ULG1 1556 aaPredicted RBP30.45■■■□□ 2.47
SLC43A3-217ENST00000530005 CAMSAP2Q08AD1 1489 aa30.45■■■□□ 2.46
SLC43A3-217ENST00000530005 ATP7AQ04656 1500 aa30.42■■■□□ 2.46
SLC43A3-217ENST00000530005 APLP2Q06481 763 aa30.42■■■□□ 2.46
SLC43A3-217ENST00000530005 AGLP35573 1532 aa30.42■■■□□ 2.46
SLC43A3-217ENST00000530005 MYOM3Q5VTT5 1437 aa30.4■■■□□ 2.46
SLC43A3-217ENST00000530005 RIMS1Q86UR5 1692 aaKnown RBP30.4■■■□□ 2.46
SLC43A3-217ENST00000530005 MLECQ14165 292 aa30.39■■■□□ 2.46
SLC43A3-217ENST00000530005 MIA2Q96PC5 1412 aa30.37■■■□□ 2.45
SLC43A3-217ENST00000530005 CCDC141Q6ZP82 1450 aa30.35■■■□□ 2.45
SLC43A3-217ENST00000530005 FER1L4A9Z1Z3 1794 aa30.35■■■□□ 2.45
SLC43A3-217ENST00000530005 ARHGEF5Q12774 1597 aa30.34■■■□□ 2.45
SLC43A3-217ENST00000530005 RTEL1-TNFRSF6BF6WH68 1400 aa30.34■■■□□ 2.45
SLC43A3-217ENST00000530005 RSPH4AQ5TD94 716 aa30.32■■■□□ 2.44
SLC43A3-217ENST00000530005 PLXNC1O60486 1568 aa30.32■■■□□ 2.44
SLC43A3-217ENST00000530005 A2MP01023 1474 aa30.29■■■□□ 2.44
SLC43A3-217ENST00000530005 ADGBQ8N7X0 1667 aa30.26■■■□□ 2.43
SLC43A3-217ENST00000530005 FGD6Q6ZV73 1430 aa30.2■■■□□ 2.43
SLC43A3-217ENST00000530005 PTPN23Q9H3S7 1636 aa30.2■■■□□ 2.43
SLC43A3-217ENST00000530005 MAST1Q9Y2H9 1570 aa30.19■■■□□ 2.42
SLC43A3-217ENST00000530005 DHX29Q7Z478 1369 aaKnown RBP30.17■■■□□ 2.42
SLC43A3-217ENST00000530005 TCOF1Q13428 1488 aaKnown RBP30.17■■■□□ 2.42
SLC43A3-217ENST00000530005 TSPY4P0CV99 314 aa30.17■■■□□ 2.42
SLC43A3-217ENST00000530005 TSPY10P0CW01 314 aa30.17■■■□□ 2.42
SLC43A3-217ENST00000530005 CEBPAP49715 358 aaPredicted RBP30.13■■■□□ 2.41
SLC43A3-217ENST00000530005 LMTK3Q96Q04 1460 aa30.12■■■□□ 2.41
SLC43A3-217ENST00000530005 PLPPR3Q6T4P5 718 aa30.12■■■□□ 2.41
SLC43A3-217ENST00000530005 ABCC5O15440 1437 aa30.11■■■□□ 2.41
SLC43A3-217ENST00000530005 CNTLNQ9NXG0 1405 aa30.11■■■□□ 2.41
SLC43A3-217ENST00000530005 C3P01024 1663 aa30.1■■■□□ 2.41
SLC43A3-217ENST00000530005 CROCC2H7BZ55 1655 aa30.07■■■□□ 2.4
SLC43A3-217ENST00000530005 SHANK2Q9UPX8 1470 aa30.06■■■□□ 2.4
SLC43A3-217ENST00000530005 DNMT1P26358 1616 aaKnown RBP30.06■■■□□ 2.4
SLC43A3-217ENST00000530005 MROH2AA6NES4 1674 aa30.06■■■□□ 2.4
SLC43A3-217ENST00000530005 GGT6Q6P531 493 aa30.05■■■□□ 2.4
SLC43A3-217ENST00000530005 ESF1Q9H501 851 aaKnown RBP30.05■■■□□ 2.4
SLC43A3-217ENST00000530005 DAPK1P53355 1430 aa30.04■■■□□ 2.4
SLC43A3-217ENST00000530005 PPP6R1Q9UPN7 881 aa30.03■■■□□ 2.4
SLC43A3-217ENST00000530005 KIF3BO15066 747 aa30.02■■■□□ 2.4
SLC43A3-217ENST00000530005 CLTCQ00610 1675 aaKnown RBP30.01■■■□□ 2.39
SLC43A3-217ENST00000530005 SETD1BQ9UPS6 1966 aaKnown RBP30■■■□□ 2.39
SLC43A3-217ENST00000530005 ZMYM3Q14202 1370 aa30■■■□□ 2.39
SLC43A3-217ENST00000530005 PREX1Q8TCU6 1659 aa29.98■■■□□ 2.39
SLC43A3-217ENST00000530005 DUOX2Q9NRD8 1548 aa29.95■■■□□ 2.39
SLC43A3-217ENST00000530005 EIF2AK4Q9P2K8 1649 aaKnown RBP29.94■■■□□ 2.38
SLC43A3-217ENST00000530005 FAM135AQ9P2D6 1515 aa29.94■■■□□ 2.38
SLC43A3-217ENST00000530005 RNF17Q9BXT8 1623 aaKnown RBP29.93■■■□□ 2.38
SLC43A3-217ENST00000530005 KIF15Q9NS87 1388 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms