RNA–Protein interactions for RNA: ENST00000529073.5

CCDC90B-211, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5 BASIC

Gene CCDC90B, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-211ENST00000529073 ARAP3Q8WWN8 1544 aa18.28■□□□□ 0.52
CCDC90B-211ENST00000529073 PLCH2O75038 1416 aa18.28■□□□□ 0.52
CCDC90B-211ENST00000529073 RICTORQ6R327 1708 aa18.28■□□□□ 0.52
CCDC90B-211ENST00000529073 NEO1Q92859 1461 aa18.27■□□□□ 0.52
CCDC90B-211ENST00000529073 AKNAQ7Z591 1439 aa18.27■□□□□ 0.52
CCDC90B-211ENST00000529073 ARHGAP5Q13017 1502 aa18.26■□□□□ 0.51
CCDC90B-211ENST00000529073 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
CCDC90B-211ENST00000529073 EHBP1L1Q8N3D4 1523 aa18.24■□□□□ 0.51
CCDC90B-211ENST00000529073 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
CCDC90B-211ENST00000529073 SIGLEC1Q9BZZ2 1709 aa18.23■□□□□ 0.51
CCDC90B-211ENST00000529073 ARHGEF12Q9NZN5 1544 aa18.23■□□□□ 0.51
CCDC90B-211ENST00000529073 MTUS2Q5JR59 1369 aa18.22■□□□□ 0.51
CCDC90B-211ENST00000529073 SAMD9LQ8IVG5 1584 aa18.21■□□□□ 0.51
CCDC90B-211ENST00000529073 ADGRL1O94910 1474 aa18.21■□□□□ 0.51
CCDC90B-211ENST00000529073 KANK4Q5T7N3 995 aaPredicted RBP18.21■□□□□ 0.51
CCDC90B-211ENST00000529073 GPATCH8Q9UKJ3 1502 aaKnown RBP18.2■□□□□ 0.5
CCDC90B-211ENST00000529073 ABCC1P33527 1531 aa18.19■□□□□ 0.5
CCDC90B-211ENST00000529073 SCAPERQ9BY12 1400 aa18.19■□□□□ 0.5
CCDC90B-211ENST00000529073 DENND4BO75064 1496 aaPredicted RBP18.19■□□□□ 0.5
CCDC90B-211ENST00000529073 YEATS2Q9ULM3 1422 aa18.18■□□□□ 0.5
CCDC90B-211ENST00000529073 ITSN2Q9NZM3 1697 aa18.18■□□□□ 0.5
CCDC90B-211ENST00000529073 POGZQ7Z3K3 1410 aa18.17■□□□□ 0.5
CCDC90B-211ENST00000529073 LRRC9Q6ZRR7 1453 aa18.17■□□□□ 0.5
CCDC90B-211ENST00000529073 NCOA2Q15596 1464 aa18.16■□□□□ 0.5
CCDC90B-211ENST00000529073 ARHGEF40Q8TER5 1519 aa18.15■□□□□ 0.5
CCDC90B-211ENST00000529073 SYCP2Q9BX26 1530 aa18.15■□□□□ 0.5
CCDC90B-211ENST00000529073 KDM4FA0A1W2PPD8 638 aa18.15■□□□□ 0.5
CCDC90B-211ENST00000529073 SUPT6HQ7KZ85 1726 aaKnown RBP18.15■□□□□ 0.5
CCDC90B-211ENST00000529073 TRAPPC8Q9Y2L5 1435 aa18.15■□□□□ 0.5
CCDC90B-211ENST00000529073 ZMYM4Q5VZL5 1548 aa18.14■□□□□ 0.49
CCDC90B-211ENST00000529073 ZNF644Q9H582 1327 aaPredicted RBP18.14■□□□□ 0.49
CCDC90B-211ENST00000529073 ZNF777Q9ULD5 760 aaPredicted RBP18.13■□□□□ 0.49
CCDC90B-211ENST00000529073 EFCAB2Q5VUJ9 269 aa18.12■□□□□ 0.49
CCDC90B-211ENST00000529073 PHLDB1Q86UU1 1377 aa18.12■□□□□ 0.49
CCDC90B-211ENST00000529073 CCNB3Q8WWL7 1395 aa18.12■□□□□ 0.49
CCDC90B-211ENST00000529073 KDM5CP41229 1560 aa18.1■□□□□ 0.49
CCDC90B-211ENST00000529073 ZFYVE16Q7Z3T8 1539 aa18.1■□□□□ 0.49
CCDC90B-211ENST00000529073 AFAP1Q8N556 730 aa18.1■□□□□ 0.49
CCDC90B-211ENST00000529073 ABCA6Q8N139 1617 aa18.09■□□□□ 0.49
CCDC90B-211ENST00000529073 MAP3K1Q13233 1512 aa18.08■□□□□ 0.49
CCDC90B-211ENST00000529073 DIP2CQ9Y2E4 1556 aa18.06■□□□□ 0.48
CCDC90B-211ENST00000529073 HNRNPMP52272 730 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC90B-211ENST00000529073 HECW2Q9P2P5 1572 aa18.05■□□□□ 0.48
CCDC90B-211ENST00000529073 KIDINS220Q9ULH0 1771 aa18.04■□□□□ 0.48
CCDC90B-211ENST00000529073 CAMSAP2Q08AD1 1489 aa18.04■□□□□ 0.48
CCDC90B-211ENST00000529073 ZNF518AQ6AHZ1 1483 aa18.04■□□□□ 0.48
CCDC90B-211ENST00000529073 CFDP1Q9UEE9 299 aaPredicted RBP18.04■□□□□ 0.48
CCDC90B-211ENST00000529073 PPARGC1BQ86YN6 1023 aaKnown RBP18.03■□□□□ 0.48
CCDC90B-211ENST00000529073 BCORL1Q5H9F3 1711 aa18.01■□□□□ 0.47
CCDC90B-211ENST00000529073 MBD5Q9P267 1494 aa18.01■□□□□ 0.47
CCDC90B-211ENST00000529073 INO80Q9ULG1 1556 aaPredicted RBP18■□□□□ 0.47
CCDC90B-211ENST00000529073 MADDQ8WXG6 1647 aa17.99■□□□□ 0.47
CCDC90B-211ENST00000529073 ADAMTSL3P82987 1691 aa17.99■□□□□ 0.47
CCDC90B-211ENST00000529073 MYOM3Q5VTT5 1437 aa17.97■□□□□ 0.47
CCDC90B-211ENST00000529073 MAGI2Q86UL8 1455 aa17.96■□□□□ 0.47
CCDC90B-211ENST00000529073 MLH3Q9UHC1 1453 aa17.96■□□□□ 0.47
CCDC90B-211ENST00000529073 ATP7AQ04656 1500 aa17.96■□□□□ 0.47
CCDC90B-211ENST00000529073 ATP10AO60312 1499 aa17.95■□□□□ 0.46
CCDC90B-211ENST00000529073 RIMS1Q86UR5 1692 aaKnown RBP17.94■□□□□ 0.46
CCDC90B-211ENST00000529073 C9orf84Q5VXU9 1444 aa17.94■□□□□ 0.46
CCDC90B-211ENST00000529073 KIAA1107Q9UPP5 1409 aa17.94■□□□□ 0.46
CCDC90B-211ENST00000529073 ARID4BQ4LE39 1312 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-211ENST00000529073 MLECQ14165 292 aa17.93■□□□□ 0.46
CCDC90B-211ENST00000529073 MYT1LQ9UL68 1186 aa17.93■□□□□ 0.46
CCDC90B-211ENST00000529073 PTPN23Q9H3S7 1636 aa17.92■□□□□ 0.46
CCDC90B-211ENST00000529073 PLEKHH2Q8IVE3 1493 aa17.92■□□□□ 0.46
CCDC90B-211ENST00000529073 ADGBQ8N7X0 1667 aa17.92■□□□□ 0.46
CCDC90B-211ENST00000529073 CCDC141Q6ZP82 1450 aa17.9■□□□□ 0.46
CCDC90B-211ENST00000529073 APLP2Q06481 763 aa17.9■□□□□ 0.46
CCDC90B-211ENST00000529073 SPAG9O60271 1321 aaKnown RBP17.9■□□□□ 0.46
CCDC90B-211ENST00000529073 ARHGEF5Q12774 1597 aa17.89■□□□□ 0.45
CCDC90B-211ENST00000529073 FGD6Q6ZV73 1430 aa17.89■□□□□ 0.45
CCDC90B-211ENST00000529073 FER1L4A9Z1Z3 1794 aa17.88■□□□□ 0.45
CCDC90B-211ENST00000529073 PLXNC1O60486 1568 aa17.87■□□□□ 0.45
CCDC90B-211ENST00000529073 REREQ9P2R6 1566 aa17.87■□□□□ 0.45
CCDC90B-211ENST00000529073 CROCC2H7BZ55 1655 aa17.87■□□□□ 0.45
CCDC90B-211ENST00000529073 PTPRMP28827 1452 aa17.85■□□□□ 0.45
CCDC90B-211ENST00000529073 MIA2Q96PC5 1412 aa17.85■□□□□ 0.45
CCDC90B-211ENST00000529073 TCOF1Q13428 1488 aaKnown RBP17.84■□□□□ 0.45
CCDC90B-211ENST00000529073 MAPK8IP2Q13387 824 aaPredicted RBP17.83■□□□□ 0.44
CCDC90B-211ENST00000529073 A2MP01023 1474 aa17.82■□□□□ 0.44
CCDC90B-211ENST00000529073 ABCC5O15440 1437 aa17.82■□□□□ 0.44
CCDC90B-211ENST00000529073 DNMT1P26358 1616 aaKnown RBP17.82■□□□□ 0.44
CCDC90B-211ENST00000529073 MAST1Q9Y2H9 1570 aa17.81■□□□□ 0.44
CCDC90B-211ENST00000529073 AGLP35573 1532 aa17.81■□□□□ 0.44
CCDC90B-211ENST00000529073 DAPK1P53355 1430 aa17.79■□□□□ 0.44
CCDC90B-211ENST00000529073 CEBPAP49715 358 aaPredicted RBP17.77■□□□□ 0.44
CCDC90B-211ENST00000529073 RTEL1-TNFRSF6BF6WH68 1400 aa17.77■□□□□ 0.44
CCDC90B-211ENST00000529073 PTPRKQ15262 1439 aa17.76■□□□□ 0.43
CCDC90B-211ENST00000529073 CLTCQ00610 1675 aaKnown RBP17.76■□□□□ 0.43
CCDC90B-211ENST00000529073 C3P01024 1663 aa17.75■□□□□ 0.43
CCDC90B-211ENST00000529073 FAM50AQ14320 339 aaKnown RBP17.74■□□□□ 0.43
CCDC90B-211ENST00000529073 CHIC2Q9UKJ5 165 aa17.74■□□□□ 0.43
CCDC90B-211ENST00000529073 MROH1Q8NDA8 1641 aa17.72■□□□□ 0.43
CCDC90B-211ENST00000529073 SHANK2Q9UPX8 1470 aa17.71■□□□□ 0.43
CCDC90B-211ENST00000529073 DHX29Q7Z478 1369 aaKnown RBP17.71■□□□□ 0.43
CCDC90B-211ENST00000529073 GGT6Q6P531 493 aa17.69■□□□□ 0.42
CCDC90B-211ENST00000529073 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
CCDC90B-211ENST00000529073 TSPY4P0CV99 314 aa17.67■□□□□ 0.42
CCDC90B-211ENST00000529073 TSPY10P0CW01 314 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms