RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	RICTOR	Q6R327	1708 aa		18.81	■□□□□ 0.6
PSMC3-205	ENST00000528362	MYO5C	Q9NQX4	1742 aa		18.81	■□□□□ 0.6
PSMC3-205	ENST00000528362	MTUS2	Q5JR59	1369 aa		18.81	■□□□□ 0.6
PSMC3-205	ENST00000528362	ARHGEF40	Q8TER5	1519 aa		18.8	■□□□□ 0.6
PSMC3-205	ENST00000528362	YEATS2	Q9ULM3	1422 aa		18.79	■□□□□ 0.6
PSMC3-205	ENST00000528362	VPS8	Q8N3P4	1428 aa		18.77	■□□□□ 0.6
PSMC3-205	ENST00000528362	MAGI2	Q86UL8	1455 aa		18.77	■□□□□ 0.59
PSMC3-205	ENST00000528362	ZFYVE16	Q7Z3T8	1539 aa		18.76	■□□□□ 0.59
PSMC3-205	ENST00000528362	PREX2	Q70Z35	1606 aa		18.76	■□□□□ 0.59
PSMC3-205	ENST00000528362	GPATCH8	Q9UKJ3	1502 aa	Known RBP	18.75	■□□□□ 0.59
PSMC3-205	ENST00000528362	AFAP1	Q8N556	730 aa		18.75	■□□□□ 0.59
PSMC3-205	ENST00000528362	ZNF518A	Q6AHZ1	1483 aa		18.75	■□□□□ 0.59
PSMC3-205	ENST00000528362	ARHGEF12	Q9NZN5	1544 aa		18.74	■□□□□ 0.59
PSMC3-205	ENST00000528362	ABCC1	P33527	1531 aa		18.73	■□□□□ 0.59
PSMC3-205	ENST00000528362	EHBP1L1	Q8N3D4	1523 aa		18.73	■□□□□ 0.59
PSMC3-205	ENST00000528362	ARID4B	Q4LE39	1312 aa	Predicted RBP	18.73	■□□□□ 0.59
PSMC3-205	ENST00000528362	CDC42BPB	Q9Y5S2	1711 aa		18.72	■□□□□ 0.59
PSMC3-205	ENST00000528362	CCNB3	Q8WWL7	1395 aa		18.72	■□□□□ 0.59
PSMC3-205	ENST00000528362	TRAPPC8	Q9Y2L5	1435 aa		18.72	■□□□□ 0.59
PSMC3-205	ENST00000528362	KDM5C	P41229	1560 aa		18.71	■□□□□ 0.59
PSMC3-205	ENST00000528362	CFDP1	Q9UEE9	299 aa	Predicted RBP	18.69	■□□□□ 0.58
PSMC3-205	ENST00000528362	ZNF777	Q9ULD5	760 aa	Predicted RBP	18.69	■□□□□ 0.58
PSMC3-205	ENST00000528362	CDC42BPA	Q5VT25	1732 aa		18.69	■□□□□ 0.58
PSMC3-205	ENST00000528362	ATP10A	O60312	1499 aa		18.67	■□□□□ 0.58
PSMC3-205	ENST00000528362	TIAM1	Q13009	1591 aa		18.67	■□□□□ 0.58
PSMC3-205	ENST00000528362	SAMD9L	Q8IVG5	1584 aa		18.67	■□□□□ 0.58
PSMC3-205	ENST00000528362	C9orf84	Q5VXU9	1444 aa		18.66	■□□□□ 0.58
PSMC3-205	ENST00000528362	ADAMTSL3	P82987	1691 aa		18.66	■□□□□ 0.58
PSMC3-205	ENST00000528362	MLH3	Q9UHC1	1453 aa		18.65	■□□□□ 0.58
PSMC3-205	ENST00000528362	HECW2	Q9P2P5	1572 aa		18.65	■□□□□ 0.58
PSMC3-205	ENST00000528362	KIAA1107	Q9UPP5	1409 aa		18.65	■□□□□ 0.58
PSMC3-205	ENST00000528362	SYCP2	Q9BX26	1530 aa		18.64	■□□□□ 0.58
PSMC3-205	ENST00000528362	BCORL1	Q5H9F3	1711 aa		18.64	■□□□□ 0.57
PSMC3-205	ENST00000528362	NCOA2	Q15596	1464 aa		18.64	■□□□□ 0.57
PSMC3-205	ENST00000528362	SIGLEC1	Q9BZZ2	1709 aa		18.63	■□□□□ 0.57
PSMC3-205	ENST00000528362	HNRNPM	P52272	730 aa	Known RBP eCLIP	18.63	■□□□□ 0.57
PSMC3-205	ENST00000528362	PTPRM	P28827	1452 aa		18.63	■□□□□ 0.57
PSMC3-205	ENST00000528362	LRRC9	Q6ZRR7	1453 aa		18.63	■□□□□ 0.57
PSMC3-205	ENST00000528362	PLEKHH2	Q8IVE3	1493 aa		18.63	■□□□□ 0.57
PSMC3-205	ENST00000528362	MYT1L	Q9UL68	1186 aa		18.62	■□□□□ 0.57
PSMC3-205	ENST00000528362	ZNF644	Q9H582	1327 aa	Predicted RBP	18.62	■□□□□ 0.57
PSMC3-205	ENST00000528362	ITSN2	Q9NZM3	1697 aa		18.62	■□□□□ 0.57
PSMC3-205	ENST00000528362	MAP3K1	Q13233	1512 aa		18.61	■□□□□ 0.57
PSMC3-205	ENST00000528362	DIP2C	Q9Y2E4	1556 aa		18.6	■□□□□ 0.57
PSMC3-205	ENST00000528362	KANK4	Q5T7N3	995 aa	Predicted RBP	18.6	■□□□□ 0.57
PSMC3-205	ENST00000528362	MADD	Q8WXG6	1647 aa		18.6	■□□□□ 0.57
PSMC3-205	ENST00000528362	MLEC	Q14165	292 aa		18.59	■□□□□ 0.57
PSMC3-205	ENST00000528362	ILDR1	Q86SU0	546 aa	Predicted RBP	18.58	■□□□□ 0.56
PSMC3-205	ENST00000528362	ABCA6	Q8N139	1617 aa		18.58	■□□□□ 0.56
PSMC3-205	ENST00000528362	SPAG9	O60271	1321 aa	Known RBP	18.57	■□□□□ 0.56
PSMC3-205	ENST00000528362	MBD5	Q9P267	1494 aa		18.57	■□□□□ 0.56
PSMC3-205	ENST00000528362	RERE	Q9P2R6	1566 aa		18.56	■□□□□ 0.56
PSMC3-205	ENST00000528362	SUPT6H	Q7KZ85	1726 aa	Known RBP	18.56	■□□□□ 0.56
PSMC3-205	ENST00000528362	KIDINS220	Q9ULH0	1771 aa		18.53	■□□□□ 0.56
PSMC3-205	ENST00000528362	AGL	P35573	1532 aa		18.52	■□□□□ 0.56
PSMC3-205	ENST00000528362	CAMSAP2	Q08AD1	1489 aa		18.52	■□□□□ 0.55
PSMC3-205	ENST00000528362	ATP7A	Q04656	1500 aa		18.51	■□□□□ 0.55
PSMC3-205	ENST00000528362	INO80	Q9ULG1	1556 aa	Predicted RBP	18.5	■□□□□ 0.55
PSMC3-205	ENST00000528362	RIMS1	Q86UR5	1692 aa	Known RBP	18.5	■□□□□ 0.55
PSMC3-205	ENST00000528362	APLP2	Q06481	763 aa		18.49	■□□□□ 0.55
PSMC3-205	ENST00000528362	CCDC141	Q6ZP82	1450 aa		18.47	■□□□□ 0.55
PSMC3-205	ENST00000528362	RTEL1-TNFRSF6B	F6WH68	1400 aa		18.47	■□□□□ 0.55
PSMC3-205	ENST00000528362	MYOM3	Q5VTT5	1437 aa		18.47	■□□□□ 0.55
PSMC3-205	ENST00000528362	PLPPR3	Q6T4P5	718 aa		18.46	■□□□□ 0.55
PSMC3-205	ENST00000528362	A2M	P01023	1474 aa		18.46	■□□□□ 0.54
PSMC3-205	ENST00000528362	MIA2	Q96PC5	1412 aa		18.45	■□□□□ 0.54
PSMC3-205	ENST00000528362	PLXNC1	O60486	1568 aa		18.44	■□□□□ 0.54
PSMC3-205	ENST00000528362	RSPH4A	Q5TD94	716 aa		18.44	■□□□□ 0.54
PSMC3-205	ENST00000528362	FER1L4	A9Z1Z3	1794 aa		18.42	■□□□□ 0.54
PSMC3-205	ENST00000528362	LMTK3	Q96Q04	1460 aa		18.42	■□□□□ 0.54
PSMC3-205	ENST00000528362	CEBPA	P49715	358 aa	Predicted RBP	18.42	■□□□□ 0.54
PSMC3-205	ENST00000528362	ARHGEF5	Q12774	1597 aa		18.41	■□□□□ 0.54
PSMC3-205	ENST00000528362	DHX29	Q7Z478	1369 aa	Known RBP	18.39	■□□□□ 0.53
PSMC3-205	ENST00000528362	CNTLN	Q9NXG0	1405 aa		18.38	■□□□□ 0.53
PSMC3-205	ENST00000528362	TSPY4	P0CV99	314 aa		18.37	■□□□□ 0.53
PSMC3-205	ENST00000528362	TSPY10	P0CW01	314 aa		18.37	■□□□□ 0.53
PSMC3-205	ENST00000528362	ESF1	Q9H501	851 aa	Known RBP	18.37	■□□□□ 0.53
PSMC3-205	ENST00000528362	FGD6	Q6ZV73	1430 aa		18.35	■□□□□ 0.53
PSMC3-205	ENST00000528362	GGT6	Q6P531	493 aa		18.34	■□□□□ 0.53
PSMC3-205	ENST00000528362	HSPA2	P54652	639 aa		18.33	■□□□□ 0.52
PSMC3-205	ENST00000528362	ADGB	Q8N7X0	1667 aa		18.33	■□□□□ 0.52
PSMC3-205	ENST00000528362	TCOF1	Q13428	1488 aa	Known RBP	18.32	■□□□□ 0.52
PSMC3-205	ENST00000528362	MAST1	Q9Y2H9	1570 aa		18.31	■□□□□ 0.52
PSMC3-205	ENST00000528362	KIF3B	O15066	747 aa		18.31	■□□□□ 0.52
PSMC3-205	ENST00000528362	PPP6R1	Q9UPN7	881 aa		18.31	■□□□□ 0.52
PSMC3-205	ENST00000528362	ABCC5	O15440	1437 aa		18.31	■□□□□ 0.52
PSMC3-205	ENST00000528362	ZMYM3	Q14202	1370 aa		18.3	■□□□□ 0.52
PSMC3-205	ENST00000528362	PTPN23	Q9H3S7	1636 aa		18.3	■□□□□ 0.52
PSMC3-205	ENST00000528362	UHRF1BP1	Q6BDS2	1440 aa		18.28	■□□□□ 0.52
PSMC3-205	ENST00000528362	SHANK2	Q9UPX8	1470 aa		18.27	■□□□□ 0.52
PSMC3-205	ENST00000528362	DAPK1	P53355	1430 aa		18.27	■□□□□ 0.52
PSMC3-205	ENST00000528362	C3	P01024	1663 aa		18.27	■□□□□ 0.52
PSMC3-205	ENST00000528362	NPAT	Q14207	1427 aa		18.26	■□□□□ 0.51
PSMC3-205	ENST00000528362	MROH2A	A6NES4	1674 aa		18.25	■□□□□ 0.51
PSMC3-205	ENST00000528362	FBXO41	Q8TF61	875 aa		18.24	■□□□□ 0.51
PSMC3-205	ENST00000528362	PTPRK	Q15262	1439 aa		18.23	■□□□□ 0.51
PSMC3-205	ENST00000528362	KIF15	Q9NS87	1388 aa		18.23	■□□□□ 0.51
PSMC3-205	ENST00000528362	PREX1	Q8TCU6	1659 aa		18.22	■□□□□ 0.51
PSMC3-205	ENST00000528362	DNMT1	P26358	1616 aa	Known RBP	18.22	■□□□□ 0.51
PSMC3-205	ENST00000528362	CLTC	Q00610	1675 aa	Known RBP	18.22	■□□□□ 0.51

Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms