RNA–Protein interactions for RNA: ENST00000527954.1

EXOSC4-203, Transcript of exosome component 4, humanhuman

TSL 2

Gene EXOSC4, Length 1,065 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC4-203ENST00000527954 POGZQ7Z3K3 1410 aa24.61■■□□□ 1.53
EXOSC4-203ENST00000527954 YEATS2Q9ULM3 1422 aa24.61■■□□□ 1.53
EXOSC4-203ENST00000527954 CCDC18Q5T9S5 1454 aa24.61■■□□□ 1.53
EXOSC4-203ENST00000527954 BCORL1Q5H9F3 1711 aa24.61■■□□□ 1.53
EXOSC4-203ENST00000527954 PTPRMP28827 1452 aa24.6■■□□□ 1.53
EXOSC4-203ENST00000527954 ZFYVE16Q7Z3T8 1539 aa24.6■■□□□ 1.53
EXOSC4-203ENST00000527954 MAGI2Q86UL8 1455 aa24.58■■□□□ 1.53
EXOSC4-203ENST00000527954 ARHGAP5Q13017 1502 aa24.58■■□□□ 1.53
EXOSC4-203ENST00000527954 FYCO1Q9BQS8 1478 aa24.57■■□□□ 1.52
EXOSC4-203ENST00000527954 MADDQ8WXG6 1647 aa24.55■■□□□ 1.52
EXOSC4-203ENST00000527954 AFAP1Q8N556 730 aa24.52■■□□□ 1.52
EXOSC4-203ENST00000527954 SIGLEC1Q9BZZ2 1709 aa24.5■■□□□ 1.51
EXOSC4-203ENST00000527954 MLECQ14165 292 aa24.5■■□□□ 1.51
EXOSC4-203ENST00000527954 ZNF518AQ6AHZ1 1483 aa24.49■■□□□ 1.51
EXOSC4-203ENST00000527954 CDC42BPBQ9Y5S2 1711 aa24.49■■□□□ 1.51
EXOSC4-203ENST00000527954 ATP10AO60312 1499 aa24.48■■□□□ 1.51
EXOSC4-203ENST00000527954 MYT1LQ9UL68 1186 aa24.47■■□□□ 1.51
EXOSC4-203ENST00000527954 RIMS1Q86UR5 1692 aaKnown RBP24.46■■□□□ 1.51
EXOSC4-203ENST00000527954 PREX2Q70Z35 1606 aa24.46■■□□□ 1.51
EXOSC4-203ENST00000527954 PLPPR3Q6T4P5 718 aa24.44■■□□□ 1.5
EXOSC4-203ENST00000527954 C9orf84Q5VXU9 1444 aa24.44■■□□□ 1.5
EXOSC4-203ENST00000527954 KDM5CP41229 1560 aa24.42■■□□□ 1.5
EXOSC4-203ENST00000527954 ARHGEF12Q9NZN5 1544 aa24.42■■□□□ 1.5
EXOSC4-203ENST00000527954 TRAPPC8Q9Y2L5 1435 aa24.41■■□□□ 1.5
EXOSC4-203ENST00000527954 ZNF777Q9ULD5 760 aaPredicted RBP24.4■■□□□ 1.5
EXOSC4-203ENST00000527954 CEP162Q5TB80 1403 aa24.4■■□□□ 1.5
EXOSC4-203ENST00000527954 ABCC1P33527 1531 aa24.4■■□□□ 1.5
EXOSC4-203ENST00000527954 CDC42BPAQ5VT25 1732 aa24.39■■□□□ 1.5
EXOSC4-203ENST00000527954 GPATCH8Q9UKJ3 1502 aaKnown RBP24.36■■□□□ 1.49
EXOSC4-203ENST00000527954 MTUS2Q5JR59 1369 aa24.36■■□□□ 1.49
EXOSC4-203ENST00000527954 MLH3Q9UHC1 1453 aa24.36■■□□□ 1.49
EXOSC4-203ENST00000527954 DIP2CQ9Y2E4 1556 aa24.35■■□□□ 1.49
EXOSC4-203ENST00000527954 ITSN2Q9NZM3 1697 aa24.34■■□□□ 1.49
EXOSC4-203ENST00000527954 LMTK3Q96Q04 1460 aa24.33■■□□□ 1.49
EXOSC4-203ENST00000527954 FER1L4A9Z1Z3 1794 aa24.33■■□□□ 1.49
EXOSC4-203ENST00000527954 CCNB3Q8WWL7 1395 aa24.32■■□□□ 1.48
EXOSC4-203ENST00000527954 CFDP1Q9UEE9 299 aaPredicted RBP24.32■■□□□ 1.48
EXOSC4-203ENST00000527954 ABCA6Q8N139 1617 aa24.32■■□□□ 1.48
EXOSC4-203ENST00000527954 LOC105371045A0A1W2PR82 267 aa24.31■■□□□ 1.48
EXOSC4-203ENST00000527954 HNRNPMP52272 730 aaKnown RBP eCLIP24.31■■□□□ 1.48
EXOSC4-203ENST00000527954 ILDR1Q86SU0 546 aaPredicted RBP24.31■■□□□ 1.48
EXOSC4-203ENST00000527954 SAMD9LQ8IVG5 1584 aa24.31■■□□□ 1.48
EXOSC4-203ENST00000527954 SYCP2Q9BX26 1530 aa24.28■■□□□ 1.48
EXOSC4-203ENST00000527954 CEBPAP49715 358 aaPredicted RBP24.27■■□□□ 1.48
EXOSC4-203ENST00000527954 REREQ9P2R6 1566 aa24.27■■□□□ 1.48
EXOSC4-203ENST00000527954 HSPA2P54652 639 aa24.26■■□□□ 1.47
EXOSC4-203ENST00000527954 KIDINS220Q9ULH0 1771 aa24.25■■□□□ 1.47
EXOSC4-203ENST00000527954 SPAG9O60271 1321 aaKnown RBP24.24■■□□□ 1.47
EXOSC4-203ENST00000527954 EHBP1L1Q8N3D4 1523 aa24.24■■□□□ 1.47
EXOSC4-203ENST00000527954 AGLP35573 1532 aa24.22■■□□□ 1.47
EXOSC4-203ENST00000527954 PLEKHH2Q8IVE3 1493 aa24.22■■□□□ 1.47
EXOSC4-203ENST00000527954 KIAA1107Q9UPP5 1409 aa24.22■■□□□ 1.47
EXOSC4-203ENST00000527954 ZNF644Q9H582 1327 aaPredicted RBP24.21■■□□□ 1.47
EXOSC4-203ENST00000527954 TIAM1Q13009 1591 aa24.2■■□□□ 1.47
EXOSC4-203ENST00000527954 ESF1Q9H501 851 aaKnown RBP24.18■■□□□ 1.46
EXOSC4-203ENST00000527954 ATP7AQ04656 1500 aa24.15■■□□□ 1.46
EXOSC4-203ENST00000527954 VPS8Q8N3P4 1428 aa24.13■■□□□ 1.45
EXOSC4-203ENST00000527954 NCOA2Q15596 1464 aa24.13■■□□□ 1.45
EXOSC4-203ENST00000527954 INO80Q9ULG1 1556 aaPredicted RBP24.12■■□□□ 1.45
EXOSC4-203ENST00000527954 MBD5Q9P267 1494 aa24.11■■□□□ 1.45
EXOSC4-203ENST00000527954 PREX1Q8TCU6 1659 aa24.1■■□□□ 1.45
EXOSC4-203ENST00000527954 A2MP01023 1474 aa24.09■■□□□ 1.45
EXOSC4-203ENST00000527954 SUPT6HQ7KZ85 1726 aaKnown RBP24.09■■□□□ 1.45
EXOSC4-203ENST00000527954 C3P01024 1663 aa24.08■■□□□ 1.44
EXOSC4-203ENST00000527954 UHRF1BP1Q6BDS2 1440 aa24.07■■□□□ 1.44
EXOSC4-203ENST00000527954 CNTLNQ9NXG0 1405 aa24.07■■□□□ 1.44
EXOSC4-203ENST00000527954 PLXNC1O60486 1568 aa24.04■■□□□ 1.44
EXOSC4-203ENST00000527954 LRRC9Q6ZRR7 1453 aa24.04■■□□□ 1.44
EXOSC4-203ENST00000527954 GGT6Q6P531 493 aa24.03■■□□□ 1.44
EXOSC4-203ENST00000527954 CAMSAP2Q08AD1 1489 aa24.02■■□□□ 1.44
EXOSC4-203ENST00000527954 KANK4Q5T7N3 995 aaPredicted RBP24.02■■□□□ 1.44
EXOSC4-203ENST00000527954 RTEL1-TNFRSF6BF6WH68 1400 aa24.01■■□□□ 1.43
EXOSC4-203ENST00000527954 FBXO41Q8TF61 875 aa24.01■■□□□ 1.43
EXOSC4-203ENST00000527954 ZMYM3Q14202 1370 aa24.01■■□□□ 1.43
EXOSC4-203ENST00000527954 CCDC141Q6ZP82 1450 aa24■■□□□ 1.43
EXOSC4-203ENST00000527954 ADGBQ8N7X0 1667 aa23.99■■□□□ 1.43
EXOSC4-203ENST00000527954 RSPH4AQ5TD94 716 aa23.98■■□□□ 1.43
EXOSC4-203ENST00000527954 SETD1BQ9UPS6 1966 aaKnown RBP23.97■■□□□ 1.43
EXOSC4-203ENST00000527954 MROH2AA6NES4 1674 aa23.96■■□□□ 1.43
EXOSC4-203ENST00000527954 DHX29Q7Z478 1369 aaKnown RBP23.96■■□□□ 1.43
EXOSC4-203ENST00000527954 MAP3K1Q13233 1512 aa23.95■■□□□ 1.43
EXOSC4-203ENST00000527954 CLTCQ00610 1675 aaKnown RBP23.95■■□□□ 1.42
EXOSC4-203ENST00000527954 NPATQ14207 1427 aa23.93■■□□□ 1.42
EXOSC4-203ENST00000527954 TSPY4P0CV99 314 aa23.92■■□□□ 1.42
EXOSC4-203ENST00000527954 TSPY10P0CW01 314 aa23.92■■□□□ 1.42
EXOSC4-203ENST00000527954 PPP6R1Q9UPN7 881 aa23.92■■□□□ 1.42
EXOSC4-203ENST00000527954 DMRT2Q9Y5R5 561 aa23.92■■□□□ 1.42
EXOSC4-203ENST00000527954 STRCQ7RTU9 1775 aa23.91■■□□□ 1.42
EXOSC4-203ENST00000527954 KIF3BO15066 747 aa23.91■■□□□ 1.42
EXOSC4-203ENST00000527954 ARHGEF5Q12774 1597 aa23.91■■□□□ 1.42
EXOSC4-203ENST00000527954 CERKQ8TCT0 537 aa23.88■■□□□ 1.41
EXOSC4-203ENST00000527954 PTPRKQ15262 1439 aa23.87■■□□□ 1.41
EXOSC4-203ENST00000527954 MYOM3Q5VTT5 1437 aa23.87■■□□□ 1.41
EXOSC4-203ENST00000527954 APLP2Q06481 763 aa23.87■■□□□ 1.41
EXOSC4-203ENST00000527954 MIA2Q96PC5 1412 aa23.84■■□□□ 1.41
EXOSC4-203ENST00000527954 PTPRTO14522 1441 aa23.83■■□□□ 1.4
EXOSC4-203ENST00000527954 NCOA1Q15788 1441 aa23.82■■□□□ 1.4
EXOSC4-203ENST00000527954 CAMSAP1Q5T5Y3 1602 aa23.81■■□□□ 1.4
EXOSC4-203ENST00000527954 WASHC2CQ9Y4E1 1318 aa23.8■■□□□ 1.4
EXOSC4-203ENST00000527954 MYO3AQ8NEV4 1616 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms