RNA–Protein interactions for RNA: ENST00000527921.1

CHD7-207, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 4

Gene CHD7, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-207ENST00000527921 SCAPERQ9BY12 1400 aa19.86■□□□□ 0.77
CHD7-207ENST00000527921 MYO5CQ9NQX4 1742 aa19.86■□□□□ 0.77
CHD7-207ENST00000527921 TROQ12816 1431 aaPredicted RBP19.85■□□□□ 0.77
CHD7-207ENST00000527921 ATP1B4Q9UN42 357 aaPredicted RBP19.85■□□□□ 0.77
CHD7-207ENST00000527921 CDK11AQ9UQ88 783 aaPredicted RBP19.83■□□□□ 0.77
CHD7-207ENST00000527921 RIMS1Q86UR5 1692 aaKnown RBP19.83■□□□□ 0.76
CHD7-207ENST00000527921 LMTK3Q96Q04 1460 aa19.8■□□□□ 0.76
CHD7-207ENST00000527921 PCF11O94913 1555 aaKnown RBP19.8■□□□□ 0.76
CHD7-207ENST00000527921 EFCAB2Q5VUJ9 269 aa19.8■□□□□ 0.76
CHD7-207ENST00000527921 CASKIN1Q8WXD9 1431 aa19.79■□□□□ 0.76
CHD7-207ENST00000527921 ATP10AO60312 1499 aa19.77■□□□□ 0.76
CHD7-207ENST00000527921 KDM5CP41229 1560 aa19.77■□□□□ 0.76
CHD7-207ENST00000527921 CLIP1P30622 1438 aa19.76■□□□□ 0.75
CHD7-207ENST00000527921 CDC42BPBQ9Y5S2 1711 aa19.76■□□□□ 0.75
CHD7-207ENST00000527921 ARHGAP5Q13017 1502 aa19.76■□□□□ 0.75
CHD7-207ENST00000527921 ZNF518AQ6AHZ1 1483 aa19.75■□□□□ 0.75
CHD7-207ENST00000527921 CCDC18Q5T9S5 1454 aa19.74■□□□□ 0.75
CHD7-207ENST00000527921 ARHGEF12Q9NZN5 1544 aa19.74■□□□□ 0.75
CHD7-207ENST00000527921 C9orf84Q5VXU9 1444 aa19.74■□□□□ 0.75
CHD7-207ENST00000527921 AFAP1Q8N556 730 aa19.73■□□□□ 0.75
CHD7-207ENST00000527921 FER1L4A9Z1Z3 1794 aa19.72■□□□□ 0.75
CHD7-207ENST00000527921 PREX2Q70Z35 1606 aa19.72■□□□□ 0.75
CHD7-207ENST00000527921 MLECQ14165 292 aa19.7■□□□□ 0.74
CHD7-207ENST00000527921 FYCO1Q9BQS8 1478 aa19.7■□□□□ 0.74
CHD7-207ENST00000527921 ABCC1P33527 1531 aa19.69■□□□□ 0.74
CHD7-207ENST00000527921 DIP2CQ9Y2E4 1556 aa19.68■□□□□ 0.74
CHD7-207ENST00000527921 MLH3Q9UHC1 1453 aa19.67■□□□□ 0.74
CHD7-207ENST00000527921 CDC42BPAQ5VT25 1732 aa19.67■□□□□ 0.74
CHD7-207ENST00000527921 TRAPPC8Q9Y2L5 1435 aa19.67■□□□□ 0.74
CHD7-207ENST00000527921 REREQ9P2R6 1566 aa19.66■□□□□ 0.74
CHD7-207ENST00000527921 ABCA6Q8N139 1617 aa19.65■□□□□ 0.74
CHD7-207ENST00000527921 ITSN2Q9NZM3 1697 aa19.65■□□□□ 0.74
CHD7-207ENST00000527921 HSPA2P54652 639 aa19.63■□□□□ 0.73
CHD7-207ENST00000527921 PLPPR3Q6T4P5 718 aa19.62■□□□□ 0.73
CHD7-207ENST00000527921 KIDINS220Q9ULH0 1771 aa19.6■□□□□ 0.73
CHD7-207ENST00000527921 AGLP35573 1532 aa19.6■□□□□ 0.73
CHD7-207ENST00000527921 GPATCH8Q9UKJ3 1502 aaKnown RBP19.6■□□□□ 0.73
CHD7-207ENST00000527921 SAMD9LQ8IVG5 1584 aa19.59■□□□□ 0.73
CHD7-207ENST00000527921 FBXO41Q8TF61 875 aa19.59■□□□□ 0.73
CHD7-207ENST00000527921 CEBPAP49715 358 aaPredicted RBP19.58■□□□□ 0.72
CHD7-207ENST00000527921 PREX1Q8TCU6 1659 aa19.57■□□□□ 0.72
CHD7-207ENST00000527921 MYT1LQ9UL68 1186 aa19.54■□□□□ 0.72
CHD7-207ENST00000527921 SYCP2Q9BX26 1530 aa19.54■□□□□ 0.72
CHD7-207ENST00000527921 C3P01024 1663 aa19.52■□□□□ 0.71
CHD7-207ENST00000527921 KIAA1107Q9UPP5 1409 aa19.51■□□□□ 0.71
CHD7-207ENST00000527921 HNRNPMP52272 730 aaKnown RBP eCLIP19.49■□□□□ 0.71
CHD7-207ENST00000527921 ZNF777Q9ULD5 760 aaPredicted RBP19.49■□□□□ 0.71
CHD7-207ENST00000527921 SETD1BQ9UPS6 1966 aaKnown RBP19.49■□□□□ 0.71
CHD7-207ENST00000527921 STRCQ7RTU9 1775 aa19.49■□□□□ 0.71
CHD7-207ENST00000527921 INO80Q9ULG1 1556 aaPredicted RBP19.47■□□□□ 0.71
CHD7-207ENST00000527921 CCNB3Q8WWL7 1395 aa19.46■□□□□ 0.71
CHD7-207ENST00000527921 TIAM1Q13009 1591 aa19.46■□□□□ 0.71
CHD7-207ENST00000527921 UHRF1BP1Q6BDS2 1440 aa19.46■□□□□ 0.71
CHD7-207ENST00000527921 CFDP1Q9UEE9 299 aaPredicted RBP19.46■□□□□ 0.71
CHD7-207ENST00000527921 PLEKHH2Q8IVE3 1493 aa19.46■□□□□ 0.71
CHD7-207ENST00000527921 ATP7AQ04656 1500 aa19.46■□□□□ 0.71
CHD7-207ENST00000527921 MTUS2Q5JR59 1369 aa19.45■□□□□ 0.7
CHD7-207ENST00000527921 PLXNC1O60486 1568 aa19.45■□□□□ 0.7
CHD7-207ENST00000527921 SPAG9O60271 1321 aaKnown RBP19.45■□□□□ 0.7
CHD7-207ENST00000527921 CEP162Q5TB80 1403 aa19.44■□□□□ 0.7
CHD7-207ENST00000527921 CNTLNQ9NXG0 1405 aa19.43■□□□□ 0.7
CHD7-207ENST00000527921 EHBP1L1Q8N3D4 1523 aa19.43■□□□□ 0.7
CHD7-207ENST00000527921 SUPT6HQ7KZ85 1726 aaKnown RBP19.42■□□□□ 0.7
CHD7-207ENST00000527921 MBD5Q9P267 1494 aa19.41■□□□□ 0.7
CHD7-207ENST00000527921 MROH2AA6NES4 1674 aa19.41■□□□□ 0.7
CHD7-207ENST00000527921 ZNF644Q9H582 1327 aaPredicted RBP19.41■□□□□ 0.7
CHD7-207ENST00000527921 CERKQ8TCT0 537 aa19.4■□□□□ 0.7
CHD7-207ENST00000527921 A2MP01023 1474 aa19.4■□□□□ 0.7
CHD7-207ENST00000527921 ESF1Q9H501 851 aaKnown RBP19.38■□□□□ 0.69
CHD7-207ENST00000527921 NPATQ14207 1427 aa19.37■□□□□ 0.69
CHD7-207ENST00000527921 ZMYM3Q14202 1370 aa19.37■□□□□ 0.69
CHD7-207ENST00000527921 DMRT2Q9Y5R5 561 aa19.35■□□□□ 0.69
CHD7-207ENST00000527921 ADGBQ8N7X0 1667 aa19.35■□□□□ 0.69
CHD7-207ENST00000527921 PTPRTO14522 1441 aa19.34■□□□□ 0.69
CHD7-207ENST00000527921 CLTCQ00610 1675 aaKnown RBP19.34■□□□□ 0.69
CHD7-207ENST00000527921 RTEL1-TNFRSF6BF6WH68 1400 aa19.33■□□□□ 0.68
CHD7-207ENST00000527921 NCOA1Q15788 1441 aa19.33■□□□□ 0.68
CHD7-207ENST00000527921 NCOA2Q15596 1464 aa19.32■□□□□ 0.68
CHD7-207ENST00000527921 PTPRKQ15262 1439 aa19.3■□□□□ 0.68
CHD7-207ENST00000527921 CAMSAP2Q08AD1 1489 aa19.28■□□□□ 0.68
CHD7-207ENST00000527921 GGT6Q6P531 493 aa19.28■□□□□ 0.68
CHD7-207ENST00000527921 DHX29Q7Z478 1369 aaKnown RBP19.28■□□□□ 0.68
CHD7-207ENST00000527921 ZNF142P52746 1687 aaPredicted RBP19.27■□□□□ 0.68
CHD7-207ENST00000527921 CAMSAP1Q5T5Y3 1602 aa19.27■□□□□ 0.68
CHD7-207ENST00000527921 MYO3AQ8NEV4 1616 aa19.27■□□□□ 0.68
CHD7-207ENST00000527921 PPP6R1Q9UPN7 881 aa19.27■□□□□ 0.68
CHD7-207ENST00000527921 CCDC141Q6ZP82 1450 aa19.27■□□□□ 0.67
CHD7-207ENST00000527921 LTBP4Q8N2S1 1624 aa19.26■□□□□ 0.67
CHD7-207ENST00000527921 LOC105371045A0A1W2PR82 267 aa19.26■□□□□ 0.67
CHD7-207ENST00000527921 VPS8Q8N3P4 1428 aa19.25■□□□□ 0.67
CHD7-207ENST00000527921 LRRC9Q6ZRR7 1453 aa19.23■□□□□ 0.67
CHD7-207ENST00000527921 ARHGEF5Q12774 1597 aa19.23■□□□□ 0.67
CHD7-207ENST00000527921 CEP170BQ9Y4F5 1589 aaPredicted RBP19.23■□□□□ 0.67
CHD7-207ENST00000527921 RSPH4AQ5TD94 716 aa19.21■□□□□ 0.67
CHD7-207ENST00000527921 PLA2R1Q13018 1463 aa19.21■□□□□ 0.67
CHD7-207ENST00000527921 TCOF1Q13428 1488 aaKnown RBP19.2■□□□□ 0.66
CHD7-207ENST00000527921 MAP3K1Q13233 1512 aa19.19■□□□□ 0.66
CHD7-207ENST00000527921 NCKAP5LQ9HCH0 1330 aa19.19■□□□□ 0.66
CHD7-207ENST00000527921 FAM135AQ9P2D6 1515 aa19.18■□□□□ 0.66
CHD7-207ENST00000527921 KDM5DQ9BY66 1539 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms