RNA–Protein interactions for RNA: ENST00000527900.1

CHD7-206, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 3

Gene CHD7, Length 398 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-206ENST00000527900 MAGI2Q86UL8 1455 aa13.94□□□□□ -0.18
CHD7-206ENST00000527900 SCAPERQ9BY12 1400 aa13.94□□□□□ -0.18
CHD7-206ENST00000527900 SIGLEC1Q9BZZ2 1709 aa13.94□□□□□ -0.18
CHD7-206ENST00000527900 POGZQ7Z3K3 1410 aa13.93□□□□□ -0.18
CHD7-206ENST00000527900 YEATS2Q9ULM3 1422 aa13.93□□□□□ -0.18
CHD7-206ENST00000527900 EFCAB2Q5VUJ9 269 aa13.93□□□□□ -0.18
CHD7-206ENST00000527900 PCF11O94913 1555 aaKnown RBP13.92□□□□□ -0.18
CHD7-206ENST00000527900 ZFYVE16Q7Z3T8 1539 aa13.91□□□□□ -0.18
CHD7-206ENST00000527900 MADDQ8WXG6 1647 aa13.9□□□□□ -0.18
CHD7-206ENST00000527900 CDC42BPBQ9Y5S2 1711 aa13.9□□□□□ -0.18
CHD7-206ENST00000527900 CCDC18Q5T9S5 1454 aa13.9□□□□□ -0.18
CHD7-206ENST00000527900 CLIP1P30622 1438 aa13.9□□□□□ -0.19
CHD7-206ENST00000527900 ARID4BQ4LE39 1312 aaPredicted RBP13.89□□□□□ -0.19
CHD7-206ENST00000527900 FYCO1Q9BQS8 1478 aa13.88□□□□□ -0.19
CHD7-206ENST00000527900 KDM5CP41229 1560 aa13.87□□□□□ -0.19
CHD7-206ENST00000527900 ARHGAP5Q13017 1502 aa13.86□□□□□ -0.19
CHD7-206ENST00000527900 ATP10AO60312 1499 aa13.86□□□□□ -0.19
CHD7-206ENST00000527900 ZNF518AQ6AHZ1 1483 aa13.86□□□□□ -0.19
CHD7-206ENST00000527900 PREX2Q70Z35 1606 aa13.86□□□□□ -0.19
CHD7-206ENST00000527900 AFAP1Q8N556 730 aa13.85□□□□□ -0.19
CHD7-206ENST00000527900 RIMS1Q86UR5 1692 aaKnown RBP13.85□□□□□ -0.19
CHD7-206ENST00000527900 ARHGEF12Q9NZN5 1544 aa13.84□□□□□ -0.19
CHD7-206ENST00000527900 CDC42BPAQ5VT25 1732 aa13.84□□□□□ -0.19
CHD7-206ENST00000527900 C9orf84Q5VXU9 1444 aa13.82□□□□□ -0.2
CHD7-206ENST00000527900 TRAPPC8Q9Y2L5 1435 aa13.81□□□□□ -0.2
CHD7-206ENST00000527900 LMTK3Q96Q04 1460 aa13.81□□□□□ -0.2
CHD7-206ENST00000527900 MLH3Q9UHC1 1453 aa13.81□□□□□ -0.2
CHD7-206ENST00000527900 ABCC1P33527 1531 aa13.81□□□□□ -0.2
CHD7-206ENST00000527900 REREQ9P2R6 1566 aa13.8□□□□□ -0.2
CHD7-206ENST00000527900 ITSN2Q9NZM3 1697 aa13.8□□□□□ -0.2
CHD7-206ENST00000527900 POTEDQ86YR6 584 aa13.8□□□□□ -0.2
CHD7-206ENST00000527900 GPATCH8Q9UKJ3 1502 aaKnown RBP13.8□□□□□ -0.2
CHD7-206ENST00000527900 DIP2CQ9Y2E4 1556 aa13.79□□□□□ -0.2
CHD7-206ENST00000527900 FER1L4A9Z1Z3 1794 aa13.79□□□□□ -0.2
CHD7-206ENST00000527900 ILDR1Q86SU0 546 aaPredicted RBP13.79□□□□□ -0.2
CHD7-206ENST00000527900 MLECQ14165 292 aa13.77□□□□□ -0.21
CHD7-206ENST00000527900 ABCA6Q8N139 1617 aa13.77□□□□□ -0.21
CHD7-206ENST00000527900 KIDINS220Q9ULH0 1771 aa13.77□□□□□ -0.21
CHD7-206ENST00000527900 SAMD9LQ8IVG5 1584 aa13.76□□□□□ -0.21
CHD7-206ENST00000527900 AGLP35573 1532 aa13.75□□□□□ -0.21
CHD7-206ENST00000527900 CEP162Q5TB80 1403 aa13.75□□□□□ -0.21
CHD7-206ENST00000527900 KIAA1107Q9UPP5 1409 aa13.73□□□□□ -0.21
CHD7-206ENST00000527900 MTUS2Q5JR59 1369 aa13.71□□□□□ -0.21
CHD7-206ENST00000527900 SYCP2Q9BX26 1530 aa13.71□□□□□ -0.21
CHD7-206ENST00000527900 CEBPAP49715 358 aaPredicted RBP13.71□□□□□ -0.21
CHD7-206ENST00000527900 HNRNPMP52272 730 aaKnown RBP eCLIP13.71□□□□□ -0.211e-6■■■■□ 23.4
CHD7-206ENST00000527900 SETD1BQ9UPS6 1966 aaKnown RBP13.71□□□□□ -0.22
CHD7-206ENST00000527900 HSPA2P54652 639 aa13.7□□□□□ -0.22
CHD7-206ENST00000527900 CFDP1Q9UEE9 299 aaPredicted RBP13.7□□□□□ -0.22
CHD7-206ENST00000527900 ZNF777Q9ULD5 760 aaPredicted RBP13.7□□□□□ -0.22
CHD7-206ENST00000527900 CCNB3Q8WWL7 1395 aa13.7□□□□□ -0.22
CHD7-206ENST00000527900 PLPPR3Q6T4P5 718 aa13.69□□□□□ -0.22
CHD7-206ENST00000527900 MYT1LQ9UL68 1186 aa13.69□□□□□ -0.22
CHD7-206ENST00000527900 TIAM1Q13009 1591 aa13.69□□□□□ -0.22
CHD7-206ENST00000527900 EHBP1L1Q8N3D4 1523 aa13.69□□□□□ -0.22
CHD7-206ENST00000527900 PLEKHH2Q8IVE3 1493 aa13.68□□□□□ -0.22
CHD7-206ENST00000527900 SPAG9O60271 1321 aaKnown RBP13.67□□□□□ -0.22
CHD7-206ENST00000527900 INO80Q9ULG1 1556 aaPredicted RBP13.67□□□□□ -0.22
CHD7-206ENST00000527900 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
CHD7-206ENST00000527900 LOC105371045A0A1W2PR82 267 aa13.67□□□□□ -0.22
CHD7-206ENST00000527900 MBD5Q9P267 1494 aa13.67□□□□□ -0.22
CHD7-206ENST00000527900 ZNF644Q9H582 1327 aaPredicted RBP13.66□□□□□ -0.22
CHD7-206ENST00000527900 C3P01024 1663 aa13.66□□□□□ -0.22
CHD7-206ENST00000527900 ATP7AQ04656 1500 aa13.65□□□□□ -0.22
CHD7-206ENST00000527900 PLXNC1O60486 1568 aa13.65□□□□□ -0.22
CHD7-206ENST00000527900 CNTLNQ9NXG0 1405 aa13.63□□□□□ -0.23
CHD7-206ENST00000527900 STRCQ7RTU9 1775 aa13.63□□□□□ -0.23
CHD7-206ENST00000527900 SUPT6HQ7KZ85 1726 aaKnown RBP13.62□□□□□ -0.23
CHD7-206ENST00000527900 RTEL1-TNFRSF6BF6WH68 1400 aa13.62□□□□□ -0.23
CHD7-206ENST00000527900 MROH2AA6NES4 1674 aa13.62□□□□□ -0.23
CHD7-206ENST00000527900 A2MP01023 1474 aa13.61□□□□□ -0.23
CHD7-206ENST00000527900 NCOA2Q15596 1464 aa13.61□□□□□ -0.23
CHD7-206ENST00000527900 FBXO41Q8TF61 875 aa13.61□□□□□ -0.23
CHD7-206ENST00000527900 VPS8Q8N3P4 1428 aa13.61□□□□□ -0.23
CHD7-206ENST00000527900 ADGBQ8N7X0 1667 aa13.59□□□□□ -0.23
CHD7-206ENST00000527900 UHRF1BP1Q6BDS2 1440 aa13.59□□□□□ -0.23
CHD7-206ENST00000527900 ZMYM3Q14202 1370 aa13.58□□□□□ -0.23
CHD7-206ENST00000527900 LRRC9Q6ZRR7 1453 aa13.58□□□□□ -0.24
CHD7-206ENST00000527900 MAP3K1Q13233 1512 aa13.58□□□□□ -0.24
CHD7-206ENST00000527900 NPATQ14207 1427 aa13.57□□□□□ -0.24
CHD7-206ENST00000527900 RSPH4AQ5TD94 716 aa13.57□□□□□ -0.24
CHD7-206ENST00000527900 ESF1Q9H501 851 aaKnown RBP13.57□□□□□ -0.24
CHD7-206ENST00000527900 PPP6R1Q9UPN7 881 aa13.57□□□□□ -0.24
CHD7-206ENST00000527900 CAMSAP2Q08AD1 1489 aa13.56□□□□□ -0.24
CHD7-206ENST00000527900 CLTCQ00610 1675 aaKnown RBP13.56□□□□□ -0.24
CHD7-206ENST00000527900 DHX29Q7Z478 1369 aaKnown RBP13.56□□□□□ -0.24
CHD7-206ENST00000527900 KANK4Q5T7N3 995 aaPredicted RBP13.55□□□□□ -0.24
CHD7-206ENST00000527900 CCDC141Q6ZP82 1450 aa13.55□□□□□ -0.24
CHD7-206ENST00000527900 ARHGEF5Q12774 1597 aa13.54□□□□□ -0.24
CHD7-206ENST00000527900 MSH5O43196 834 aa13.54□□□□□ -0.24
CHD7-206ENST00000527900 GGT6Q6P531 493 aa13.53□□□□□ -0.24
CHD7-206ENST00000527900 CERKQ8TCT0 537 aa13.53□□□□□ -0.24
CHD7-206ENST00000527900 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
CHD7-206ENST00000527900 PTPRKQ15262 1439 aa13.53□□□□□ -0.24
CHD7-206ENST00000527900 PTPRTO14522 1441 aa13.52□□□□□ -0.25
CHD7-206ENST00000527900 NCOA1Q15788 1441 aa13.51□□□□□ -0.25
CHD7-206ENST00000527900 ZNF142P52746 1687 aaPredicted RBP13.49□□□□□ -0.25
CHD7-206ENST00000527900 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
CHD7-206ENST00000527900 MIA2Q96PC5 1412 aa13.48□□□□□ -0.25
CHD7-206ENST00000527900 KIF3BO15066 747 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms