RNA–Protein interactions for RNA: ENST00000527142.5

SYVN1-208, Transcript of synoviolin 1, humanhuman

TSL 5

Gene SYVN1, Length 796 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-208ENST00000527142 POGZQ7Z3K3 1410 aa17.16■□□□□ 0.34
SYVN1-208ENST00000527142 RAPGEF3O95398 923 aa17.16■□□□□ 0.34
SYVN1-208ENST00000527142 PREX2Q70Z35 1606 aa17.16■□□□□ 0.34
SYVN1-208ENST00000527142 EHBP1L1Q8N3D4 1523 aa17.16■□□□□ 0.34
SYVN1-208ENST00000527142 RICTORQ6R327 1708 aa17.16■□□□□ 0.34
SYVN1-208ENST00000527142 MTUS2Q5JR59 1369 aa17.15■□□□□ 0.34
SYVN1-208ENST00000527142 ARHGEF40Q8TER5 1519 aa17.14■□□□□ 0.33
SYVN1-208ENST00000527142 SCAPERQ9BY12 1400 aa17.13■□□□□ 0.33
SYVN1-208ENST00000527142 MAGI2Q86UL8 1455 aa17.12■□□□□ 0.33
SYVN1-208ENST00000527142 TIAM1Q13009 1591 aa17.11■□□□□ 0.33
SYVN1-208ENST00000527142 ZNF518AQ6AHZ1 1483 aa17.1■□□□□ 0.33
SYVN1-208ENST00000527142 CDC42BPBQ9Y5S2 1711 aa17.1■□□□□ 0.33
SYVN1-208ENST00000527142 ABCC1P33527 1531 aa17.09■□□□□ 0.33
SYVN1-208ENST00000527142 MAP3K1Q13233 1512 aa17.09■□□□□ 0.33
SYVN1-208ENST00000527142 GPATCH8Q9UKJ3 1502 aaKnown RBP17.09■□□□□ 0.33
SYVN1-208ENST00000527142 CDC42BPAQ5VT25 1732 aa17.09■□□□□ 0.33
SYVN1-208ENST00000527142 ZFYVE16Q7Z3T8 1539 aa17.08■□□□□ 0.32
SYVN1-208ENST00000527142 KDM5CP41229 1560 aa17.07■□□□□ 0.32
SYVN1-208ENST00000527142 CCNB3Q8WWL7 1395 aa17.07■□□□□ 0.32
SYVN1-208ENST00000527142 PLEKHH2Q8IVE3 1493 aa17.05■□□□□ 0.32
SYVN1-208ENST00000527142 LRRC9Q6ZRR7 1453 aa17.03■□□□□ 0.32
SYVN1-208ENST00000527142 ITSN2Q9NZM3 1697 aa17.03■□□□□ 0.32
SYVN1-208ENST00000527142 YEATS2Q9ULM3 1422 aa17.03■□□□□ 0.32
SYVN1-208ENST00000527142 SUPT6HQ7KZ85 1726 aaKnown RBP17.02■□□□□ 0.32
SYVN1-208ENST00000527142 NCOA2Q15596 1464 aa17.02■□□□□ 0.32
SYVN1-208ENST00000527142 KIAA1107Q9UPP5 1409 aa17.02■□□□□ 0.31
SYVN1-208ENST00000527142 SAMD9LQ8IVG5 1584 aa17.02■□□□□ 0.31
SYVN1-208ENST00000527142 HECW2Q9P2P5 1572 aa17.02■□□□□ 0.31
SYVN1-208ENST00000527142 ARHGEF12Q9NZN5 1544 aa17.01■□□□□ 0.31
SYVN1-208ENST00000527142 CFDP1Q9UEE9 299 aaPredicted RBP17.01■□□□□ 0.31
SYVN1-208ENST00000527142 MLH3Q9UHC1 1453 aa17■□□□□ 0.31
SYVN1-208ENST00000527142 SYCP2Q9BX26 1530 aa17■□□□□ 0.31
SYVN1-208ENST00000527142 TRAPPC8Q9Y2L5 1435 aa16.99■□□□□ 0.31
SYVN1-208ENST00000527142 C9orf84Q5VXU9 1444 aa16.98■□□□□ 0.31
SYVN1-208ENST00000527142 ATP10AO60312 1499 aa16.98■□□□□ 0.31
SYVN1-208ENST00000527142 AFAP1Q8N556 730 aa16.97■□□□□ 0.31
SYVN1-208ENST00000527142 ZNF777Q9ULD5 760 aaPredicted RBP16.96■□□□□ 0.31
SYVN1-208ENST00000527142 REREQ9P2R6 1566 aa16.96■□□□□ 0.31
SYVN1-208ENST00000527142 ADAMTSL3P82987 1691 aa16.95■□□□□ 0.3
SYVN1-208ENST00000527142 BCORL1Q5H9F3 1711 aa16.95■□□□□ 0.3
SYVN1-208ENST00000527142 ARID4BQ4LE39 1312 aaPredicted RBP16.95■□□□□ 0.3
SYVN1-208ENST00000527142 DIP2CQ9Y2E4 1556 aa16.94■□□□□ 0.3
SYVN1-208ENST00000527142 APLP2Q06481 763 aa16.93■□□□□ 0.3
SYVN1-208ENST00000527142 ABCA6Q8N139 1617 aa16.92■□□□□ 0.3
SYVN1-208ENST00000527142 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
SYVN1-208ENST00000527142 CAMSAP2Q08AD1 1489 aa16.91■□□□□ 0.3
SYVN1-208ENST00000527142 MBD5Q9P267 1494 aa16.91■□□□□ 0.3
SYVN1-208ENST00000527142 SIGLEC1Q9BZZ2 1709 aa16.9■□□□□ 0.3
SYVN1-208ENST00000527142 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
SYVN1-208ENST00000527142 FBXO41Q8TF61 875 aa16.9■□□□□ 0.3
SYVN1-208ENST00000527142 SPAG9O60271 1321 aaKnown RBP16.9■□□□□ 0.3
SYVN1-208ENST00000527142 ATP7AQ04656 1500 aa16.9■□□□□ 0.3
SYVN1-208ENST00000527142 KIDINS220Q9ULH0 1771 aa16.89■□□□□ 0.3
SYVN1-208ENST00000527142 MADDQ8WXG6 1647 aa16.89■□□□□ 0.29
SYVN1-208ENST00000527142 HNRNPMP52272 730 aaKnown RBP eCLIP16.89■□□□□ 0.29
SYVN1-208ENST00000527142 AGLP35573 1532 aa16.89■□□□□ 0.29
SYVN1-208ENST00000527142 MYOM3Q5VTT5 1437 aa16.88■□□□□ 0.29
SYVN1-208ENST00000527142 MYT1LQ9UL68 1186 aa16.88■□□□□ 0.29
SYVN1-208ENST00000527142 ZNF644Q9H582 1327 aaPredicted RBP16.88■□□□□ 0.29
SYVN1-208ENST00000527142 MIA2Q96PC5 1412 aa16.87■□□□□ 0.29
SYVN1-208ENST00000527142 PTPRMP28827 1452 aa16.87■□□□□ 0.29
SYVN1-208ENST00000527142 CCDC141Q6ZP82 1450 aa16.87■□□□□ 0.29
SYVN1-208ENST00000527142 ARHGEF5Q12774 1597 aa16.85■□□□□ 0.29
SYVN1-208ENST00000527142 RTEL1-TNFRSF6BF6WH68 1400 aa16.85■□□□□ 0.29
SYVN1-208ENST00000527142 RSPH4AQ5TD94 716 aa16.84■□□□□ 0.29
SYVN1-208ENST00000527142 PLXNC1O60486 1568 aa16.83■□□□□ 0.28
SYVN1-208ENST00000527142 RIMS1Q86UR5 1692 aaKnown RBP16.81■□□□□ 0.28
SYVN1-208ENST00000527142 FER1L4A9Z1Z3 1794 aa16.8■□□□□ 0.28
SYVN1-208ENST00000527142 A2MP01023 1474 aa16.8■□□□□ 0.28
SYVN1-208ENST00000527142 ADGBQ8N7X0 1667 aa16.79■□□□□ 0.28
SYVN1-208ENST00000527142 MLECQ14165 292 aa16.78■□□□□ 0.28
SYVN1-208ENST00000527142 FGD6Q6ZV73 1430 aa16.78■□□□□ 0.28
SYVN1-208ENST00000527142 MAST1Q9Y2H9 1570 aa16.77■□□□□ 0.27
SYVN1-208ENST00000527142 TCOF1Q13428 1488 aaKnown RBP16.75■□□□□ 0.27
SYVN1-208ENST00000527142 PTPN23Q9H3S7 1636 aa16.75■□□□□ 0.27
SYVN1-208ENST00000527142 CNTLNQ9NXG0 1405 aa16.75■□□□□ 0.27
SYVN1-208ENST00000527142 SHANK2Q9UPX8 1470 aa16.74■□□□□ 0.27
SYVN1-208ENST00000527142 TSPY4P0CV99 314 aa16.74■□□□□ 0.27
SYVN1-208ENST00000527142 TSPY10P0CW01 314 aa16.74■□□□□ 0.27
SYVN1-208ENST00000527142 DHX29Q7Z478 1369 aaKnown RBP16.73■□□□□ 0.27
SYVN1-208ENST00000527142 ESF1Q9H501 851 aaKnown RBP16.7■□□□□ 0.26
SYVN1-208ENST00000527142 FAM135AQ9P2D6 1515 aa16.7■□□□□ 0.26
SYVN1-208ENST00000527142 CROCC2H7BZ55 1655 aa16.69■□□□□ 0.26
SYVN1-208ENST00000527142 PPP6R1Q9UPN7 881 aa16.69■□□□□ 0.26
SYVN1-208ENST00000527142 DNMT1P26358 1616 aaKnown RBP16.69■□□□□ 0.26
SYVN1-208ENST00000527142 ABCC5O15440 1437 aa16.68■□□□□ 0.26
SYVN1-208ENST00000527142 DAPK1P53355 1430 aa16.68■□□□□ 0.26
SYVN1-208ENST00000527142 MROH2AA6NES4 1674 aa16.68■□□□□ 0.26
SYVN1-208ENST00000527142 LMTK3Q96Q04 1460 aa16.67■□□□□ 0.26
SYVN1-208ENST00000527142 EIF2AK4Q9P2K8 1649 aaKnown RBP16.64■□□□□ 0.25
SYVN1-208ENST00000527142 DUOX2Q9NRD8 1548 aa16.64■□□□□ 0.25
SYVN1-208ENST00000527142 NPATQ14207 1427 aa16.63■□□□□ 0.25
SYVN1-208ENST00000527142 C3P01024 1663 aa16.63■□□□□ 0.25
SYVN1-208ENST00000527142 RNF17Q9BXT8 1623 aaKnown RBP16.63■□□□□ 0.25
SYVN1-208ENST00000527142 KIF15Q9NS87 1388 aa16.63■□□□□ 0.25
SYVN1-208ENST00000527142 KDM5DQ9BY66 1539 aa16.62■□□□□ 0.25
SYVN1-208ENST00000527142 KIF3BO15066 747 aa16.62■□□□□ 0.25
SYVN1-208ENST00000527142 GGT6Q6P531 493 aa16.62■□□□□ 0.25
SYVN1-208ENST00000527142 PREX1Q8TCU6 1659 aa16.62■□□□□ 0.25
SYVN1-208ENST00000527142 ERBINQ96RT1 1412 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms