RNA–Protein interactions for RNA: ENST00000526821.5

ATPAF1-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 3

Gene ATPAF1, Length 1,222 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-208ENST00000526821 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.56□□□□□ -0.56
ATPAF1-208ENST00000526821 RIMBP2O15034 1052 aa11.55□□□□□ -0.56
ATPAF1-208ENST00000526821 DOK7Q18PE1 504 aa11.55□□□□□ -0.56
ATPAF1-208ENST00000526821 TMC2Q8TDI7 906 aa11.55□□□□□ -0.56
ATPAF1-208ENST00000526821 ZNF710Q8N1W2 664 aa11.53□□□□□ -0.56
ATPAF1-208ENST00000526821 MYO15BQ96JP2 1530 aa11.53□□□□□ -0.56
ATPAF1-208ENST00000526821 GTPBP6O43824 516 aaPredicted RBP11.51□□□□□ -0.57
ATPAF1-208ENST00000526821 ST18O60284 1047 aa11.5□□□□□ -0.57
ATPAF1-208ENST00000526821 TMEM92Q6UXU6 159 aa11.5□□□□□ -0.57
ATPAF1-208ENST00000526821 POTEMA6NI47 508 aa11.49□□□□□ -0.57
ATPAF1-208ENST00000526821 POTEGQ6S5H5 508 aa11.48□□□□□ -0.57
ATPAF1-208ENST00000526821 C2orf72A6NCS6 295 aa11.47□□□□□ -0.57
ATPAF1-208ENST00000526821 SPRYD3Q8NCJ5 442 aa11.44□□□□□ -0.58
ATPAF1-208ENST00000526821 ZSWIM6Q9HCJ5 1215 aa11.44□□□□□ -0.58
ATPAF1-208ENST00000526821 KIF3CO14782 793 aa11.43□□□□□ -0.58
ATPAF1-208ENST00000526821 LCE2DQ5TA82 110 aaPredicted RBP11.43□□□□□ -0.58
ATPAF1-208ENST00000526821 NACADO15069 1562 aa11.42□□□□□ -0.58
ATPAF1-208ENST00000526821 HOXB3P14651 431 aaPredicted RBP11.42□□□□□ -0.58
ATPAF1-208ENST00000526821 EMP3P54852 163 aa11.4□□□□□ -0.58
ATPAF1-208ENST00000526821 GPHNQ9NQX3 736 aaPredicted RBP11.4□□□□□ -0.58
ATPAF1-208ENST00000526821 PDE4AP27815 886 aa11.39□□□□□ -0.59
ATPAF1-208ENST00000526821 PCDH10Q9P2E7 1040 aa11.38□□□□□ -0.59
ATPAF1-208ENST00000526821 HOXB1P14653 301 aaPredicted RBP11.37□□□□□ -0.59
ATPAF1-208ENST00000526821 FOXK1P85037 733 aa11.37□□□□□ -0.59
ATPAF1-208ENST00000526821 CFAP44Q96MT7 982 aa11.37□□□□□ -0.59
ATPAF1-208ENST00000526821 PAXIP1Q6ZW49 1069 aaPredicted RBP11.36□□□□□ -0.59
ATPAF1-208ENST00000526821 MARVELD3Q96A59 401 aa11.36□□□□□ -0.59
ATPAF1-208ENST00000526821 PLPP6Q8IY26 295 aa11.34□□□□□ -0.59
ATPAF1-208ENST00000526821 SLC34A2O95436 690 aa11.33□□□□□ -0.6
ATPAF1-208ENST00000526821 CRISPLD2Q9H0B8 497 aa11.33□□□□□ -0.6
ATPAF1-208ENST00000526821 TBC1D12O60347 775 aa11.31□□□□□ -0.6
ATPAF1-208ENST00000526821 DSG2Q14126 1118 aa11.31□□□□□ -0.6
ATPAF1-208ENST00000526821 RB1CC1Q8TDY2 1594 aa11.31□□□□□ -0.6
ATPAF1-208ENST00000526821 SHROOM4Q9ULL8 1493 aa11.31□□□□□ -0.6
ATPAF1-208ENST00000526821 PPP1R15BQ5SWA1 713 aa11.3□□□□□ -0.6
ATPAF1-208ENST00000526821 LARP6Q9BRS8 491 aaKnown RBP11.3□□□□□ -0.6
ATPAF1-208ENST00000526821 ERBB3P21860 1342 aa11.3□□□□□ -0.6
ATPAF1-208ENST00000526821 FAM205CA6NFA0 338 aa11.29□□□□□ -0.6
ATPAF1-208ENST00000526821 ARSIQ5FYB1 569 aa11.29□□□□□ -0.6
ATPAF1-208ENST00000526821 GPR153Q6NV75 609 aa11.29□□□□□ -0.6
ATPAF1-208ENST00000526821 DDX27Q96GQ7 796 aaKnown RBP11.29□□□□□ -0.6
ATPAF1-208ENST00000526821 PCDHGA4Q9Y5G9 962 aa11.27□□□□□ -0.61
ATPAF1-208ENST00000526821 NCKAP5LQ9HCH0 1330 aa11.27□□□□□ -0.61
ATPAF1-208ENST00000526821 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
ATPAF1-208ENST00000526821 HS3ST6Q96QI5 342 aa11.25□□□□□ -0.61
ATPAF1-208ENST00000526821 PTCD2Q8WV60 388 aaKnown RBP11.24□□□□□ -0.61
ATPAF1-208ENST00000526821 ZNF316A6NFI3 1004 aaPredicted RBP11.22□□□□□ -0.61
ATPAF1-208ENST00000526821 MFSD10Q14728 455 aa11.22□□□□□ -0.61
ATPAF1-208ENST00000526821 NUDT7P0C024 238 aa11.21□□□□□ -0.61
ATPAF1-208ENST00000526821 CADPS2Q86UW7 1296 aa11.21□□□□□ -0.61
ATPAF1-208ENST00000526821 VARS2Q5ST30 1063 aaKnown RBP11.2□□□□□ -0.62
ATPAF1-208ENST00000526821 SCRIBQ14160 1630 aa11.2□□□□□ -0.62
ATPAF1-208ENST00000526821 KHSRPQ92945 711 aaKnown RBP eCLIP11.19□□□□□ -0.62
ATPAF1-208ENST00000526821 PSDA5PKW4 1024 aaPredicted RBP11.18□□□□□ -0.62
ATPAF1-208ENST00000526821 UPF1Q92900 1129 aaKnown RBP eCLIP11.18□□□□□ -0.62
ATPAF1-208ENST00000526821 WDR70Q9NW82 654 aa11.18□□□□□ -0.62
ATPAF1-208ENST00000526821 OXER1Q8TDS5 423 aa11.16□□□□□ -0.62
ATPAF1-208ENST00000526821 MAP3K9P80192 1104 aa11.14□□□□□ -0.63
ATPAF1-208ENST00000526821 LHX6Q9UPM6 363 aa11.13□□□□□ -0.63
ATPAF1-208ENST00000526821 ZNF687Q8N1G0 1237 aa11.12□□□□□ -0.63
ATPAF1-208ENST00000526821 POTEB3A0JP26 581 aa11.11□□□□□ -0.63
ATPAF1-208ENST00000526821 POTEBQ6S5H4 581 aa11.11□□□□□ -0.63
ATPAF1-208ENST00000526821 PLSCR2Q9NRY7 297 aa11.1□□□□□ -0.63
ATPAF1-208ENST00000526821 PPP4R3BQ5MIZ7 849 aa11.08□□□□□ -0.64
ATPAF1-208ENST00000526821 PBX2P40425 430 aa11.07□□□□□ -0.64
ATPAF1-208ENST00000526821 PLCB2Q00722 1185 aa11.07□□□□□ -0.64
ATPAF1-208ENST00000526821 EVI5O60447 810 aa11.06□□□□□ -0.64
ATPAF1-208ENST00000526821 CAMK2BQ13554 666 aa11.06□□□□□ -0.64
ATPAF1-208ENST00000526821 KCNH8Q96L42 1107 aa11.06□□□□□ -0.64
ATPAF1-208ENST00000526821 UNC13AQ9UPW8 1703 aa11.06□□□□□ -0.64
ATPAF1-208ENST00000526821 KDM4FA0A1W2PPD8 638 aa11.05□□□□□ -0.64
ATPAF1-208ENST00000526821 E2F4Q16254 413 aa11.05□□□□□ -0.64
ATPAF1-208ENST00000526821 TSHZ2Q9NRE2 1034 aa11.04□□□□□ -0.64
ATPAF1-208ENST00000526821 EMILIN3Q9NT22 766 aa11.04□□□□□ -0.64
ATPAF1-208ENST00000526821 KRTAP3-3Q9BYR6 98 aa11.02□□□□□ -0.65
ATPAF1-208ENST00000526821 KRTAP3-2Q9BYR7 98 aa11.02□□□□□ -0.65
ATPAF1-208ENST00000526821 ZNF454Q8N9F8 522 aa11.01□□□□□ -0.65
ATPAF1-208ENST00000526821 ANO8Q9HCE9 1232 aaPredicted RBP11.01□□□□□ -0.65
ATPAF1-208ENST00000526821 BICRAQ9NZM4 1560 aa11□□□□□ -0.65
ATPAF1-208ENST00000526821 DPYSL4O14531 572 aa11□□□□□ -0.65
ATPAF1-208ENST00000526821 JPH4Q96JJ6 628 aa10.98□□□□□ -0.65
ATPAF1-208ENST00000526821 ARHGAP33O14559 1287 aa10.97□□□□□ -0.65
ATPAF1-208ENST00000526821 SPDYE16A6NNV3 312 aaPredicted RBP10.96□□□□□ -0.65
ATPAF1-208ENST00000526821 FOSBP53539 338 aa10.96□□□□□ -0.65
ATPAF1-208ENST00000526821 HAP1P54257 671 aaPredicted RBP10.95□□□□□ -0.66
ATPAF1-208ENST00000526821 LSM11P83369 360 aaKnown RBP eCLIP10.95□□□□□ -0.66
ATPAF1-208ENST00000526821 ANKRD13DQ6ZTN6 518 aa10.95□□□□□ -0.66
ATPAF1-208ENST00000526821 SPNS2Q8IVW8 549 aa10.95□□□□□ -0.66
ATPAF1-208ENST00000526821 PTGER2P43116 358 aa10.94□□□□□ -0.66
ATPAF1-208ENST00000526821 ZDHHC16Q969W1 377 aa10.94□□□□□ -0.66
ATPAF1-208ENST00000526821 FBXW7Q969H0 707 aa10.93□□□□□ -0.66
ATPAF1-208ENST00000526821 PTPREP23469 700 aa10.92□□□□□ -0.66
ATPAF1-208ENST00000526821 P3H3Q8IVL6 736 aa10.92□□□□□ -0.66
ATPAF1-208ENST00000526821 AXIN2Q9Y2T1 843 aa10.92□□□□□ -0.66
ATPAF1-208ENST00000526821 ARIH1Q9Y4X5 557 aaPredicted RBP10.92□□□□□ -0.66
ATPAF1-208ENST00000526821 PHF14O94880 888 aa10.91□□□□□ -0.66
ATPAF1-208ENST00000526821 PDIA6Q15084 440 aa10.91□□□□□ -0.66
ATPAF1-208ENST00000526821 TYW1BQ6NUM6 668 aa10.91□□□□□ -0.66
ATPAF1-208ENST00000526821 KCNK17Q96T54 332 aa10.91□□□□□ -0.66
ATPAF1-208ENST00000526821 EPAS1Q99814 870 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms