RNA–Protein interactions for RNA: ENST00000525359.1

CLNS1A-203, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 283 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-203ENST00000525359 RIMBP2O15034 1052 aa7.27□□□□□ -1.25
CLNS1A-203ENST00000525359 DOK7Q18PE1 504 aa7.26□□□□□ -1.25
CLNS1A-203ENST00000525359 PDE4AP27815 886 aa7.25□□□□□ -1.25
CLNS1A-203ENST00000525359 C2orf72A6NCS6 295 aa7.24□□□□□ -1.25
CLNS1A-203ENST00000525359 ZNF710Q8N1W2 664 aa7.24□□□□□ -1.25
CLNS1A-203ENST00000525359 FAM163AQ96GL9 167 aaPredicted RBP7.23□□□□□ -1.25
CLNS1A-203ENST00000525359 GPHNQ9NQX3 736 aaPredicted RBP7.23□□□□□ -1.25
CLNS1A-203ENST00000525359 TMEM92Q6UXU6 159 aa7.22□□□□□ -1.25
CLNS1A-203ENST00000525359 KIF3CO14782 793 aa7.2□□□□□ -1.26
CLNS1A-203ENST00000525359 PLCB2Q00722 1185 aa7.2□□□□□ -1.26
CLNS1A-203ENST00000525359 FOXK1P85037 733 aa7.19□□□□□ -1.26
CLNS1A-203ENST00000525359 DDX27Q96GQ7 796 aaKnown RBP7.19□□□□□ -1.26
CLNS1A-203ENST00000525359 LARP6Q9BRS8 491 aaKnown RBP7.19□□□□□ -1.26
CLNS1A-203ENST00000525359 CRISPLD2Q9H0B8 497 aa7.19□□□□□ -1.26
CLNS1A-203ENST00000525359 ZSWIM6Q9HCJ5 1215 aa7.19□□□□□ -1.26
CLNS1A-203ENST00000525359 PLPP6Q8IY26 295 aa7.18□□□□□ -1.26
CLNS1A-203ENST00000525359 WDR70Q9NW82 654 aa7.18□□□□□ -1.26
CLNS1A-203ENST00000525359 PPP1R15BQ5SWA1 713 aa7.17□□□□□ -1.26
CLNS1A-203ENST00000525359 TBC1D12O60347 775 aa7.16□□□□□ -1.26
CLNS1A-203ENST00000525359 DSG2Q14126 1118 aa7.16□□□□□ -1.26
CLNS1A-203ENST00000525359 NCKAP5LQ9HCH0 1330 aa7.16□□□□□ -1.26
CLNS1A-203ENST00000525359 ST18O60284 1047 aa7.15□□□□□ -1.26
CLNS1A-203ENST00000525359 HOXB3P14651 431 aaPredicted RBP7.15□□□□□ -1.26
CLNS1A-203ENST00000525359 ZNF316A6NFI3 1004 aaPredicted RBP7.14□□□□□ -1.27
CLNS1A-203ENST00000525359 SLC34A2O95436 690 aa7.14□□□□□ -1.27
CLNS1A-203ENST00000525359 CADPS2Q86UW7 1296 aa7.14□□□□□ -1.27
CLNS1A-203ENST00000525359 MFSD10Q14728 455 aa7.13□□□□□ -1.27
CLNS1A-203ENST00000525359 HOXB1P14653 301 aaPredicted RBP7.12□□□□□ -1.27
CLNS1A-203ENST00000525359 HAP1P54257 671 aaPredicted RBP7.12□□□□□ -1.27
CLNS1A-203ENST00000525359 EMP3P54852 163 aa7.12□□□□□ -1.27
CLNS1A-203ENST00000525359 TSHZ2Q9NRE2 1034 aa7.11□□□□□ -1.27
CLNS1A-203ENST00000525359 PTCD2Q8WV60 388 aaKnown RBP7.1□□□□□ -1.27
CLNS1A-203ENST00000525359 ARSIQ5FYB1 569 aa7.09□□□□□ -1.27
CLNS1A-203ENST00000525359 PCDHGA4Q9Y5G9 962 aa7.09□□□□□ -1.27
CLNS1A-203ENST00000525359 POTEMA6NI47 508 aa7.08□□□□□ -1.28
CLNS1A-203ENST00000525359 GPR153Q6NV75 609 aa7.08□□□□□ -1.28
CLNS1A-203ENST00000525359 POTEGQ6S5H5 508 aa7.08□□□□□ -1.28
CLNS1A-203ENST00000525359 UPF1Q92900 1129 aaKnown RBP eCLIP7.08□□□□□ -1.28
CLNS1A-203ENST00000525359 MARVELD3Q96A59 401 aa7.08□□□□□ -1.28
CLNS1A-203ENST00000525359 ERBB3P21860 1342 aa7.07□□□□□ -1.28
CLNS1A-203ENST00000525359 MAP3K9P80192 1104 aa7.07□□□□□ -1.28
CLNS1A-203ENST00000525359 E2F4Q16254 413 aa7.06□□□□□ -1.28
CLNS1A-203ENST00000525359 OXER1Q8TDS5 423 aa7.06□□□□□ -1.28
CLNS1A-203ENST00000525359 PSDA5PKW4 1024 aaPredicted RBP7.05□□□□□ -1.28
CLNS1A-203ENST00000525359 NUDT7P0C024 238 aa7.05□□□□□ -1.28
CLNS1A-203ENST00000525359 LCE2DQ5TA82 110 aaPredicted RBP7.05□□□□□ -1.28
CLNS1A-203ENST00000525359 FAM205CA6NFA0 338 aa7.04□□□□□ -1.28
CLNS1A-203ENST00000525359 CAMK2BQ13554 666 aa7.04□□□□□ -1.28
CLNS1A-203ENST00000525359 PCDH10Q9P2E7 1040 aa7.04□□□□□ -1.28
CLNS1A-203ENST00000525359 P3H3Q8IVL6 736 aa7.03□□□□□ -1.28
CLNS1A-203ENST00000525359 VARS2Q5ST30 1063 aaKnown RBP7.01□□□□□ -1.29
CLNS1A-203ENST00000525359 VSIG10Q8N0Z9 540 aa7.01□□□□□ -1.29
CLNS1A-203ENST00000525359 KHSRPQ92945 711 aaKnown RBP eCLIP7.01□□□□□ -1.29
CLNS1A-203ENST00000525359 EVI5O60447 810 aa7□□□□□ -1.29
CLNS1A-203ENST00000525359 KCNH8Q96L42 1107 aa7□□□□□ -1.29
CLNS1A-203ENST00000525359 HS3ST6Q96QI5 342 aa7□□□□□ -1.29
CLNS1A-203ENST00000525359 EMILIN3Q9NT22 766 aa7□□□□□ -1.29
CLNS1A-203ENST00000525359 SPDYE16A6NNV3 312 aaPredicted RBP6.99□□□□□ -1.29
CLNS1A-203ENST00000525359 DPYSL4O14531 572 aa6.99□□□□□ -1.29
CLNS1A-203ENST00000525359 PPP4R3BQ5MIZ7 849 aa6.99□□□□□ -1.29
CLNS1A-203ENST00000525359 LHX6Q9UPM6 363 aa6.99□□□□□ -1.29
CLNS1A-203ENST00000525359 CDAN1Q8IWY9 1227 aa6.97□□□□□ -1.29
CLNS1A-203ENST00000525359 ARIH1Q9Y4X5 557 aaPredicted RBP6.97□□□□□ -1.29
CLNS1A-203ENST00000525359 ZNF687Q8N1G0 1237 aa6.96□□□□□ -1.3
CLNS1A-203ENST00000525359 ARHGEF1Q92888 912 aaKnown RBP6.96□□□□□ -1.3
CLNS1A-203ENST00000525359 ANO8Q9HCE9 1232 aaPredicted RBP6.96□□□□□ -1.3
CLNS1A-203ENST00000525359 KDM4FA0A1W2PPD8 638 aa6.95□□□□□ -1.3
CLNS1A-203ENST00000525359 PBX2P40425 430 aa6.95□□□□□ -1.3
CLNS1A-203ENST00000525359 ZNF454Q8N9F8 522 aa6.95□□□□□ -1.3
CLNS1A-203ENST00000525359 PDIA6Q15084 440 aa6.94□□□□□ -1.3
CLNS1A-203ENST00000525359 JPH4Q96JJ6 628 aa6.94□□□□□ -1.3
CLNS1A-203ENST00000525359 KCNV2Q8TDN2 545 aa6.93□□□□□ -1.3
CLNS1A-203ENST00000525359 PHF14O94880 888 aa6.92□□□□□ -1.3
CLNS1A-203ENST00000525359 FBXW7Q969H0 707 aa6.92□□□□□ -1.3
CLNS1A-203ENST00000525359 EPAS1Q99814 870 aa6.92□□□□□ -1.3
CLNS1A-203ENST00000525359 FOSBP53539 338 aa6.91□□□□□ -1.3
CLNS1A-203ENST00000525359 TYW1BQ6NUM6 668 aa6.91□□□□□ -1.3
CLNS1A-203ENST00000525359 ZDHHC16Q969W1 377 aa6.91□□□□□ -1.3
CLNS1A-203ENST00000525359 ARHGAP33O14559 1287 aa6.9□□□□□ -1.3
CLNS1A-203ENST00000525359 PTGER2P43116 358 aa6.9□□□□□ -1.3
CLNS1A-203ENST00000525359 KDM2AQ9Y2K7 1162 aa6.9□□□□□ -1.3
CLNS1A-203ENST00000525359 POTEB3A0JP26 581 aa6.89□□□□□ -1.31
CLNS1A-203ENST00000525359 PTPREP23469 700 aa6.89□□□□□ -1.31
CLNS1A-203ENST00000525359 POTEBQ6S5H4 581 aa6.89□□□□□ -1.31
CLNS1A-203ENST00000525359 DDX12PQ92771 950 aa6.89□□□□□ -1.31
CLNS1A-203ENST00000525359 GRXCR2A6NFK2 248 aa6.88□□□□□ -1.31
CLNS1A-203ENST00000525359 BCL2L12Q9HB09 334 aa6.88□□□□□ -1.31
CLNS1A-203ENST00000525359 NBR1Q14596 966 aa6.87□□□□□ -1.31
CLNS1A-203ENST00000525359 SMYD5Q6GMV2 418 aa6.87□□□□□ -1.31
CLNS1A-203ENST00000525359 KCNK17Q96T54 332 aa6.87□□□□□ -1.31
CLNS1A-203ENST00000525359 PCDHGA10Q9Y5H3 936 aa6.87□□□□□ -1.31
CLNS1A-203ENST00000525359 TULP1O00294 542 aaPredicted RBP6.86□□□□□ -1.31
CLNS1A-203ENST00000525359 LSM11P83369 360 aaKnown RBP eCLIP6.86□□□□□ -1.31
CLNS1A-203ENST00000525359 MAP3K7O43318 606 aa6.85□□□□□ -1.31
CLNS1A-203ENST00000525359 SLC24A1O60721 1099 aa6.85□□□□□ -1.31
CLNS1A-203ENST00000525359 ANKRD13DQ6ZTN6 518 aa6.85□□□□□ -1.31
CLNS1A-203ENST00000525359 STAC3Q96MF2 364 aa6.85□□□□□ -1.31
CLNS1A-203ENST00000525359 RBM33Q96EV2 1170 aaKnown RBP6.84□□□□□ -1.31
CLNS1A-203ENST00000525359 ADAM33Q9BZ11 813 aa6.84□□□□□ -1.31
CLNS1A-203ENST00000525359 AXIN2Q9Y2T1 843 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms