RNA–Protein interactions for RNA: ENST00000525214.1

COPB1-203, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-203ENST00000525214 HOXB3P14651 431 aaPredicted RBP15□□□□□ -0.01
COPB1-203ENST00000525214 C2orf72A6NCS6 295 aa14.99□□□□□ -0.01
COPB1-203ENST00000525214 TMC2Q8TDI7 906 aa14.91□□□□□ -0.02
COPB1-203ENST00000525214 POTEMA6NI47 508 aa14.9□□□□□ -0.02
COPB1-203ENST00000525214 POTEGQ6S5H5 508 aa14.9□□□□□ -0.02
COPB1-203ENST00000525214 DOK7Q18PE1 504 aa14.87□□□□□ -0.03
COPB1-203ENST00000525214 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.87□□□□□ -0.03
COPB1-203ENST00000525214 GPHNQ9NQX3 736 aaPredicted RBP14.86□□□□□ -0.03
COPB1-203ENST00000525214 SPRYD3Q8NCJ5 442 aa14.85□□□□□ -0.03
COPB1-203ENST00000525214 CRISPLD2Q9H0B8 497 aa14.85□□□□□ -0.03
COPB1-203ENST00000525214 NCKAP5LQ9HCH0 1330 aa14.84□□□□□ -0.03
COPB1-203ENST00000525214 CADPS2Q86UW7 1296 aa14.82□□□□□ -0.04
COPB1-203ENST00000525214 MARVELD3Q96A59 401 aa14.82□□□□□ -0.04
COPB1-203ENST00000525214 FOXK1P85037 733 aa14.81□□□□□ -0.04
COPB1-203ENST00000525214 PAXIP1Q6ZW49 1069 aaPredicted RBP14.81□□□□□ -0.04
COPB1-203ENST00000525214 ZNF710Q8N1W2 664 aa14.81□□□□□ -0.04
COPB1-203ENST00000525214 DSG2Q14126 1118 aa14.8□□□□□ -0.04
COPB1-203ENST00000525214 HOXB1P14653 301 aaPredicted RBP14.78□□□□□ -0.04
COPB1-203ENST00000525214 CFAP44Q96MT7 982 aa14.78□□□□□ -0.04
COPB1-203ENST00000525214 RIMBP2O15034 1052 aa14.77□□□□□ -0.05
COPB1-203ENST00000525214 PLPP6Q8IY26 295 aa14.77□□□□□ -0.05
COPB1-203ENST00000525214 GPR153Q6NV75 609 aa14.76□□□□□ -0.05
COPB1-203ENST00000525214 ZSWIM6Q9HCJ5 1215 aa14.76□□□□□ -0.05
COPB1-203ENST00000525214 SLC34A2O95436 690 aa14.73□□□□□ -0.05
COPB1-203ENST00000525214 PDE4AP27815 886 aa14.73□□□□□ -0.05
COPB1-203ENST00000525214 EMP3P54852 163 aa14.72□□□□□ -0.05
COPB1-203ENST00000525214 ARSIQ5FYB1 569 aa14.71□□□□□ -0.05
COPB1-203ENST00000525214 PPP1R15BQ5SWA1 713 aa14.7□□□□□ -0.06
COPB1-203ENST00000525214 KHSRPQ92945 711 aaKnown RBP eCLIP14.7□□□□□ -0.066e-9■■□□□ 12.7
COPB1-203ENST00000525214 LARP6Q9BRS8 491 aaKnown RBP14.7□□□□□ -0.06
COPB1-203ENST00000525214 MFSD10Q14728 455 aa14.69□□□□□ -0.06
COPB1-203ENST00000525214 POTEB3A0JP26 581 aa14.68□□□□□ -0.06
COPB1-203ENST00000525214 POTEBQ6S5H4 581 aa14.68□□□□□ -0.06
COPB1-203ENST00000525214 PCDHGA4Q9Y5G9 962 aa14.67□□□□□ -0.06
COPB1-203ENST00000525214 FAM205CA6NFA0 338 aa14.65□□□□□ -0.06
COPB1-203ENST00000525214 DDX27Q96GQ7 796 aaKnown RBP14.65□□□□□ -0.06
COPB1-203ENST00000525214 PTCD2Q8WV60 388 aaKnown RBP14.64□□□□□ -0.07
COPB1-203ENST00000525214 HS3ST6Q96QI5 342 aa14.63□□□□□ -0.07
COPB1-203ENST00000525214 CDAN1Q8IWY9 1227 aa14.61□□□□□ -0.07
COPB1-203ENST00000525214 NUDT7P0C024 238 aa14.6□□□□□ -0.07
COPB1-203ENST00000525214 OXER1Q8TDS5 423 aa14.59□□□□□ -0.07
COPB1-203ENST00000525214 KDM4FA0A1W2PPD8 638 aa14.58□□□□□ -0.08
COPB1-203ENST00000525214 PCDH10Q9P2E7 1040 aa14.58□□□□□ -0.08
COPB1-203ENST00000525214 ERBB3P21860 1342 aa14.58□□□□□ -0.08
COPB1-203ENST00000525214 UPF1Q92900 1129 aaKnown RBP eCLIP14.56□□□□□ -0.08
COPB1-203ENST00000525214 VARS2Q5ST30 1063 aaKnown RBP14.55□□□□□ -0.08
COPB1-203ENST00000525214 TSHZ2Q9NRE2 1034 aa14.55□□□□□ -0.08
COPB1-203ENST00000525214 EMILIN3Q9NT22 766 aa14.54□□□□□ -0.08
COPB1-203ENST00000525214 ZNF316A6NFI3 1004 aaPredicted RBP14.53□□□□□ -0.08
COPB1-203ENST00000525214 PLCB2Q00722 1185 aa14.51□□□□□ -0.09
COPB1-203ENST00000525214 LHX6Q9UPM6 363 aa14.51□□□□□ -0.09
COPB1-203ENST00000525214 CAMK2BQ13554 666 aa14.5□□□□□ -0.09
COPB1-203ENST00000525214 TBC1D12O60347 775 aa14.48□□□□□ -0.09
COPB1-203ENST00000525214 KRTAP3-3Q9BYR6 98 aa14.46□□□□□ -0.09
COPB1-203ENST00000525214 KRTAP3-2Q9BYR7 98 aa14.46□□□□□ -0.09
COPB1-203ENST00000525214 ZNF687Q8N1G0 1237 aa14.43□□□□□ -0.1
COPB1-203ENST00000525214 EVI5O60447 810 aa14.39□□□□□ -0.11
COPB1-203ENST00000525214 MAP3K9P80192 1104 aa14.39□□□□□ -0.11
COPB1-203ENST00000525214 ANO8Q9HCE9 1232 aaPredicted RBP14.38□□□□□ -0.11
COPB1-203ENST00000525214 DPYSL4O14531 572 aa14.36□□□□□ -0.11
COPB1-203ENST00000525214 WDR70Q9NW82 654 aa14.36□□□□□ -0.11
COPB1-203ENST00000525214 E2F4Q16254 413 aa14.35□□□□□ -0.11
COPB1-203ENST00000525214 POTEEQ6S8J3 1075 aa14.35□□□□□ -0.11
COPB1-203ENST00000525214 PSDA5PKW4 1024 aaPredicted RBP14.34□□□□□ -0.11
COPB1-203ENST00000525214 FOSBP53539 338 aa14.29□□□□□ -0.12
COPB1-203ENST00000525214 PPP4R3BQ5MIZ7 849 aa14.28□□□□□ -0.12
COPB1-203ENST00000525214 PLSCR2Q9NRY7 297 aa14.28□□□□□ -0.12
COPB1-203ENST00000525214 ZNF454Q8N9F8 522 aa14.27□□□□□ -0.13
COPB1-203ENST00000525214 AXIN2Q9Y2T1 843 aa14.27□□□□□ -0.13
COPB1-203ENST00000525214 ARIH1Q9Y4X5 557 aaPredicted RBP14.27□□□□□ -0.13
COPB1-203ENST00000525214 PBX2P40425 430 aa14.26□□□□□ -0.13
COPB1-203ENST00000525214 SPNS2Q8IVW8 549 aa14.26□□□□□ -0.13
COPB1-203ENST00000525214 JPH4Q96JJ6 628 aa14.26□□□□□ -0.13
COPB1-203ENST00000525214 HAP1P54257 671 aaPredicted RBP14.25□□□□□ -0.13
COPB1-203ENST00000525214 PDIA6Q15084 440 aa14.24□□□□□ -0.13
COPB1-203ENST00000525214 LSM11P83369 360 aaKnown RBP eCLIP14.21□□□□□ -0.13
COPB1-203ENST00000525214 PCDHGA10Q9Y5H3 936 aa14.21□□□□□ -0.13
COPB1-203ENST00000525214 ARHGAP33O14559 1287 aa14.2□□□□□ -0.14
COPB1-203ENST00000525214 KCNV2Q8TDN2 545 aa14.2□□□□□ -0.14
COPB1-203ENST00000525214 PSEN2P49810 448 aa14.19□□□□□ -0.14
COPB1-203ENST00000525214 PTGER2P43116 358 aa14.18□□□□□ -0.14
COPB1-203ENST00000525214 ADAM33Q9BZ11 813 aa14.18□□□□□ -0.14
COPB1-203ENST00000525214 BCL2L12Q9HB09 334 aa14.18□□□□□ -0.14
COPB1-203ENST00000525214 SPDYE16A6NNV3 312 aaPredicted RBP14.17□□□□□ -0.14
COPB1-203ENST00000525214 DMRTA1Q5VZB9 504 aa14.17□□□□□ -0.14
COPB1-203ENST00000525214 ZDHHC16Q969W1 377 aa14.17□□□□□ -0.14
COPB1-203ENST00000525214 PHF14O94880 888 aa14.16□□□□□ -0.14
COPB1-203ENST00000525214 ANKRD13DQ6ZTN6 518 aa14.15□□□□□ -0.14
COPB1-203ENST00000525214 DDX12PQ92771 950 aa14.15□□□□□ -0.14
COPB1-203ENST00000525214 KCNK17Q96T54 332 aa14.15□□□□□ -0.14
COPB1-203ENST00000525214 KDM2AQ9Y2K7 1162 aa14.15□□□□□ -0.14
COPB1-203ENST00000525214 MMRN1Q13201 1228 aa14.13□□□□□ -0.15
COPB1-203ENST00000525214 TYW1BQ6NUM6 668 aa14.12□□□□□ -0.15
COPB1-203ENST00000525214 ARHGEF1Q92888 912 aaKnown RBP14.12□□□□□ -0.15
COPB1-203ENST00000525214 PTPREP23469 700 aa14.09□□□□□ -0.15
COPB1-203ENST00000525214 FBXW7Q969H0 707 aa14.09□□□□□ -0.15
COPB1-203ENST00000525214 EPAS1Q99814 870 aa14.09□□□□□ -0.15
COPB1-203ENST00000525214 ADGRD1Q6QNK2 874 aa14.07□□□□□ -0.16
COPB1-203ENST00000525214 P3H3Q8IVL6 736 aa14.06□□□□□ -0.16
COPB1-203ENST00000525214 TK2O00142 265 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms