RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 RIMS1Q86UR5 1692 aaKnown RBP28.3■■■□□ 2.12
TSKU-202ENST00000525167 ATP1B4Q9UN42 357 aaPredicted RBP28.28■■■□□ 2.12
TSKU-202ENST00000525167 KIF14Q15058 1648 aa28.28■■■□□ 2.12
TSKU-202ENST00000525167 LMTK3Q96Q04 1460 aa28.27■■■□□ 2.12
TSKU-202ENST00000525167 EFCAB2Q5VUJ9 269 aa28.27■■■□□ 2.12
TSKU-202ENST00000525167 EHMT2Q96KQ7 1210 aa28.27■■■□□ 2.12
TSKU-202ENST00000525167 TROQ12816 1431 aaPredicted RBP28.26■■■□□ 2.12
TSKU-202ENST00000525167 CLIP1P30622 1438 aa28.25■■■□□ 2.11
TSKU-202ENST00000525167 SIGLEC1Q9BZZ2 1709 aa28.23■■■□□ 2.11
TSKU-202ENST00000525167 ATP10AO60312 1499 aa28.2■■■□□ 2.1
TSKU-202ENST00000525167 ZNF518AQ6AHZ1 1483 aa28.2■■■□□ 2.1
TSKU-202ENST00000525167 C9orf84Q5VXU9 1444 aa28.18■■■□□ 2.1
TSKU-202ENST00000525167 ARHGAP5Q13017 1502 aa28.17■■■□□ 2.1
TSKU-202ENST00000525167 LRRIQ1Q96JM4 1722 aa28.15■■■□□ 2.1
TSKU-202ENST00000525167 FER1L4A9Z1Z3 1794 aa28.15■■■□□ 2.1
TSKU-202ENST00000525167 KDM5CP41229 1560 aa28.15■■■□□ 2.1
TSKU-202ENST00000525167 CCDC18Q5T9S5 1454 aa28.15■■■□□ 2.1
TSKU-202ENST00000525167 ARHGEF12Q9NZN5 1544 aa28.14■■■□□ 2.1
TSKU-202ENST00000525167 FBXO41Q8TF61 875 aa28.14■■■□□ 2.1
TSKU-202ENST00000525167 CASKIN1Q8WXD9 1431 aa28.13■■■□□ 2.09
TSKU-202ENST00000525167 MLECQ14165 292 aa28.1■■■□□ 2.09
TSKU-202ENST00000525167 CDC42BPBQ9Y5S2 1711 aa28.06■■■□□ 2.08
TSKU-202ENST00000525167 REREQ9P2R6 1566 aa28.06■■■□□ 2.08
TSKU-202ENST00000525167 PREX2Q70Z35 1606 aa28.06■■■□□ 2.08
TSKU-202ENST00000525167 AFAP1Q8N556 730 aa28.05■■■□□ 2.08
TSKU-202ENST00000525167 MLH3Q9UHC1 1453 aa28.04■■■□□ 2.08
TSKU-202ENST00000525167 FYCO1Q9BQS8 1478 aa28.03■■■□□ 2.08
TSKU-202ENST00000525167 PLPPR3Q6T4P5 718 aa28.02■■■□□ 2.08
TSKU-202ENST00000525167 DIP2CQ9Y2E4 1556 aa28.02■■■□□ 2.08
TSKU-202ENST00000525167 ABCC1P33527 1531 aa28.02■■■□□ 2.08
TSKU-202ENST00000525167 HSPA2P54652 639 aa28.01■■■□□ 2.07
TSKU-202ENST00000525167 PREX1Q8TCU6 1659 aa27.97■■■□□ 2.07
TSKU-202ENST00000525167 MYT1LQ9UL68 1186 aa27.96■■■□□ 2.07
TSKU-202ENST00000525167 ITSN2Q9NZM3 1697 aa27.96■■■□□ 2.07
TSKU-202ENST00000525167 ABCA6Q8N139 1617 aa27.96■■■□□ 2.07
TSKU-202ENST00000525167 AGLP35573 1532 aa27.95■■■□□ 2.06
TSKU-202ENST00000525167 TRAPPC8Q9Y2L5 1435 aa27.94■■■□□ 2.06
TSKU-202ENST00000525167 CDC42BPAQ5VT25 1732 aa27.92■■■□□ 2.06
TSKU-202ENST00000525167 CEBPAP49715 358 aaPredicted RBP27.87■■■□□ 2.05
TSKU-202ENST00000525167 KIDINS220Q9ULH0 1771 aa27.86■■■□□ 2.05
TSKU-202ENST00000525167 UHRF1BP1Q6BDS2 1440 aa27.86■■■□□ 2.05
TSKU-202ENST00000525167 SETD1BQ9UPS6 1966 aaKnown RBP27.84■■■□□ 2.05
TSKU-202ENST00000525167 GPATCH8Q9UKJ3 1502 aaKnown RBP27.83■■■□□ 2.05
TSKU-202ENST00000525167 SAMD9LQ8IVG5 1584 aa27.82■■■□□ 2.04
TSKU-202ENST00000525167 CNTLNQ9NXG0 1405 aa27.82■■■□□ 2.04
TSKU-202ENST00000525167 ESF1Q9H501 851 aaKnown RBP27.81■■■□□ 2.04
TSKU-202ENST00000525167 C3P01024 1663 aa27.81■■■□□ 2.04
TSKU-202ENST00000525167 DMRT2Q9Y5R5 561 aa27.8■■■□□ 2.04
TSKU-202ENST00000525167 SYCP2Q9BX26 1530 aa27.79■■■□□ 2.04
TSKU-202ENST00000525167 PLEKHH2Q8IVE3 1493 aa27.79■■■□□ 2.04
TSKU-202ENST00000525167 KIAA1107Q9UPP5 1409 aa27.79■■■□□ 2.04
TSKU-202ENST00000525167 CERKQ8TCT0 537 aa27.78■■■□□ 2.04
TSKU-202ENST00000525167 ZNF777Q9ULD5 760 aaPredicted RBP27.76■■■□□ 2.03
TSKU-202ENST00000525167 SPAG9O60271 1321 aaKnown RBP27.75■■■□□ 2.03
TSKU-202ENST00000525167 STRCQ7RTU9 1775 aa27.75■■■□□ 2.03
TSKU-202ENST00000525167 CCNB3Q8WWL7 1395 aa27.73■■■□□ 2.03
TSKU-202ENST00000525167 MTUS2Q5JR59 1369 aa27.73■■■□□ 2.03
TSKU-202ENST00000525167 CFDP1Q9UEE9 299 aaPredicted RBP27.72■■■□□ 2.03
TSKU-202ENST00000525167 ATP7AQ04656 1500 aa27.72■■■□□ 2.03
TSKU-202ENST00000525167 MROH2AA6NES4 1674 aa27.71■■■□□ 2.03
TSKU-202ENST00000525167 INO80Q9ULG1 1556 aaPredicted RBP27.69■■■□□ 2.02
TSKU-202ENST00000525167 HNRNPMP52272 730 aaKnown RBP eCLIP27.69■■■□□ 2.02
TSKU-202ENST00000525167 PLXNC1O60486 1568 aa27.68■■■□□ 2.02
TSKU-202ENST00000525167 PTPRTO14522 1441 aa27.67■■■□□ 2.02
TSKU-202ENST00000525167 NPATQ14207 1427 aa27.67■■■□□ 2.02
TSKU-202ENST00000525167 EHBP1L1Q8N3D4 1523 aa27.65■■■□□ 2.02
TSKU-202ENST00000525167 A2MP01023 1474 aa27.64■■■□□ 2.01
TSKU-202ENST00000525167 SUPT6HQ7KZ85 1726 aaKnown RBP27.63■■■□□ 2.01
TSKU-202ENST00000525167 TIAM1Q13009 1591 aa27.62■■■□□ 2.01
TSKU-202ENST00000525167 ZMYM3Q14202 1370 aa27.61■■■□□ 2.01
TSKU-202ENST00000525167 NCOA1Q15788 1441 aa27.59■■■□□ 2.01
TSKU-202ENST00000525167 CEP162Q5TB80 1403 aa27.59■■■□□ 2.01
TSKU-202ENST00000525167 ADGBQ8N7X0 1667 aa27.58■■■□□ 2.01
TSKU-202ENST00000525167 PPP6R1Q9UPN7 881 aa27.56■■■□□ 2
TSKU-202ENST00000525167 MBD5Q9P267 1494 aa27.56■■■□□ 2
TSKU-202ENST00000525167 RTEL1-TNFRSF6BF6WH68 1400 aa27.55■■■□□ 2
TSKU-202ENST00000525167 CLTCQ00610 1675 aaKnown RBP27.54■■■□□ 2
TSKU-202ENST00000525167 ZNF644Q9H582 1327 aaPredicted RBP27.51■■□□□ 1.99
TSKU-202ENST00000525167 CAMSAP1Q5T5Y3 1602 aa27.51■■□□□ 1.99
TSKU-202ENST00000525167 ZNF142P52746 1687 aaPredicted RBP27.49■■□□□ 1.99
TSKU-202ENST00000525167 PTPRKQ15262 1439 aa27.49■■□□□ 1.99
TSKU-202ENST00000525167 GGT6Q6P531 493 aa27.48■■□□□ 1.99
TSKU-202ENST00000525167 IQSEC2Q5JU85 1478 aa27.48■■□□□ 1.99
TSKU-202ENST00000525167 LTBP4Q8N2S1 1624 aa27.48■■□□□ 1.99
TSKU-202ENST00000525167 MYO3AQ8NEV4 1616 aa27.48■■□□□ 1.99
TSKU-202ENST00000525167 PLA2R1Q13018 1463 aa27.46■■□□□ 1.99
TSKU-202ENST00000525167 DHX29Q7Z478 1369 aaKnown RBP27.45■■□□□ 1.98
TSKU-202ENST00000525167 NCOA2Q15596 1464 aa27.44■■□□□ 1.98
TSKU-202ENST00000525167 RSPH4AQ5TD94 716 aa27.44■■□□□ 1.98
TSKU-202ENST00000525167 CCDC141Q6ZP82 1450 aa27.44■■□□□ 1.98
TSKU-202ENST00000525167 CEP170BQ9Y4F5 1589 aaPredicted RBP27.43■■□□□ 1.98
TSKU-202ENST00000525167 FAM135AQ9P2D6 1515 aa27.42■■□□□ 1.98
TSKU-202ENST00000525167 CAMSAP2Q08AD1 1489 aa27.41■■□□□ 1.98
TSKU-202ENST00000525167 PKD2Q13563 968 aa27.4■■□□□ 1.98
TSKU-202ENST00000525167 TCOF1Q13428 1488 aaKnown RBP27.38■■□□□ 1.97
TSKU-202ENST00000525167 ARHGEF5Q12774 1597 aa27.36■■□□□ 1.97
TSKU-202ENST00000525167 NCKAP5LQ9HCH0 1330 aa27.36■■□□□ 1.97
TSKU-202ENST00000525167 A2ML1A8K2U0 1454 aa27.34■■□□□ 1.97
TSKU-202ENST00000525167 KDM5DQ9BY66 1539 aa27.34■■□□□ 1.97
TSKU-202ENST00000525167 KIF3BO15066 747 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms