RNA–Protein interactions for RNA: ENST00000525167.1

TSKU-202, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

TSL 4

Gene TSKU, Length 542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-202ENST00000525167 NISCHQ9Y2I1 1504 aa43.19■■■■■ 4.5
TSKU-202ENST00000525167 CCDC180Q9P1Z9 1646 aa38.85■■■■□ 3.81
TSKU-202ENST00000525167 ABCC9O60706 1549 aa38.79■■■■□ 3.8
TSKU-202ENST00000525167 RB1CC1Q8TDY2 1594 aa37■■■■□ 3.51
TSKU-202ENST00000525167 NACADO15069 1562 aa36.74■■■■□ 3.47
TSKU-202ENST00000525167 DNAJC5BQ9UF47 199 aa36.4■■■■□ 3.42
TSKU-202ENST00000525167 DCAF8L2P0C7V8 631 aa36.33■■■■□ 3.41
TSKU-202ENST00000525167 MYO15BQ96JP2 1530 aa36.28■■■■□ 3.4
TSKU-202ENST00000525167 UNC13AQ9UPW8 1703 aa36.06■■■■□ 3.36
TSKU-202ENST00000525167 PABPN1Q86U42 306 aaKnown RBP eCLIP36.04■■■■□ 3.36
TSKU-202ENST00000525167 BICRAQ9NZM4 1560 aa35.87■■■■□ 3.33
TSKU-202ENST00000525167 ZCCHC6Q5VYS8 1495 aaKnown RBP35.8■■■■□ 3.32
TSKU-202ENST00000525167 DCAF1Q9Y4B6 1507 aa35.77■■■■□ 3.32
TSKU-202ENST00000525167 SHROOM4Q9ULL8 1493 aa35.54■■■■□ 3.28
TSKU-202ENST00000525167 SCRIBQ14160 1630 aa35.28■■■■□ 3.24
TSKU-202ENST00000525167 CC2D2AQ9P2K1 1620 aa35.07■■■■□ 3.21
TSKU-202ENST00000525167 EIF4G1Q04637 1599 aaKnown RBP35.01■■■■□ 3.2
TSKU-202ENST00000525167 CECR2Q9BXF3 1484 aa34.99■■■■□ 3.19
TSKU-202ENST00000525167 NCAPD3P42695 1498 aa33.91■■■■□ 3.02
TSKU-202ENST00000525167 ATAD2BQ9ULI0 1458 aa33.75■■■□□ 2.99
TSKU-202ENST00000525167 SMARCA2P51531 1590 aa33.71■■■□□ 2.99
TSKU-202ENST00000525167 SMARCA4P51532 1647 aa33.7■■■□□ 2.99
TSKU-202ENST00000525167 HMGXB3Q12766 1538 aa33.67■■■□□ 2.98
TSKU-202ENST00000525167 CUX2O14529 1486 aa33.58■■■□□ 2.97
TSKU-202ENST00000525167 DNAJC5Q9H3Z4 198 aa33.58■■■□□ 2.97
TSKU-202ENST00000525167 BAZ1AQ9NRL2 1556 aaPredicted RBP33.56■■■□□ 2.96
TSKU-202ENST00000525167 ERCC6Q03468 1493 aa33.54■■■□□ 2.96
TSKU-202ENST00000525167 PEG3Q9GZU2 1588 aa33.44■■■□□ 2.94
TSKU-202ENST00000525167 BAZ1BQ9UIG0 1483 aaKnown RBP33.43■■■□□ 2.94
TSKU-202ENST00000525167 NESP48681 1621 aa33.28■■■□□ 2.92
TSKU-202ENST00000525167 MROH2BQ7Z745 1585 aa33.23■■■□□ 2.91
TSKU-202ENST00000525167 LAMC3Q9Y6N6 1575 aa33.17■■■□□ 2.9
TSKU-202ENST00000525167 THOC2Q8NI27 1593 aaKnown RBP33.04■■■□□ 2.88
TSKU-202ENST00000525167 PDS5BQ9NTI5 1447 aa32.97■■■□□ 2.87
TSKU-202ENST00000525167 KIF21AQ7Z4S6 1674 aa32.88■■■□□ 2.85
TSKU-202ENST00000525167 CADPSQ9ULU8 1353 aa32.84■■■□□ 2.85
TSKU-202ENST00000525167 WIZO95785 1651 aa32.81■■■□□ 2.84
TSKU-202ENST00000525167 MRC2Q9UBG0 1479 aa32.67■■■□□ 2.82
TSKU-202ENST00000525167 WDR62O43379 1518 aa32.6■■■□□ 2.81
TSKU-202ENST00000525167 RSF1Q96T23 1441 aaPredicted RBP32.53■■■□□ 2.8
TSKU-202ENST00000525167 CEP164Q9UPV0 1460 aa32.52■■■□□ 2.8
TSKU-202ENST00000525167 CFTRP13569 1480 aa32.48■■■□□ 2.79
TSKU-202ENST00000525167 TOP2AP11388 1531 aaKnown RBP32.46■■■□□ 2.79
TSKU-202ENST00000525167 FANCD2Q9BXW9 1451 aa32.45■■■□□ 2.79
TSKU-202ENST00000525167 URB2Q14146 1524 aaKnown RBP32.17■■■□□ 2.74
TSKU-202ENST00000525167 PRDM2Q13029 1718 aa32.13■■■□□ 2.73
TSKU-202ENST00000525167 CCDC88BA6NC98 1476 aa32.04■■■□□ 2.72
TSKU-202ENST00000525167 OSCARQ8IYS5 282 aa31.97■■■□□ 2.71
TSKU-202ENST00000525167 TRIM41Q8WV44 630 aa31.97■■■□□ 2.71
TSKU-202ENST00000525167 IFT140Q96RY7 1462 aa31.89■■■□□ 2.7
TSKU-202ENST00000525167 ABCC8Q09428 1581 aa31.85■■■□□ 2.69
TSKU-202ENST00000525167 TOPBP1Q92547 1522 aa31.83■■■□□ 2.69
TSKU-202ENST00000525167 ZNF608Q9ULD9 1512 aaPredicted RBP31.76■■■□□ 2.68
TSKU-202ENST00000525167 DNMBPQ6XZF7 1577 aa31.73■■■□□ 2.67
TSKU-202ENST00000525167 EIF4G3O43432 1585 aaKnown RBP31.63■■■□□ 2.65
TSKU-202ENST00000525167 TARBP1Q13395 1621 aaKnown RBP31.57■■■□□ 2.64
TSKU-202ENST00000525167 RIMBP3CA6NJZ7 1639 aa31.55■■■□□ 2.64
TSKU-202ENST00000525167 RIMBP3BA6NNM3 1639 aa31.55■■■□□ 2.64
TSKU-202ENST00000525167 RIMBP3Q9UFD9 1639 aa31.55■■■□□ 2.64
TSKU-202ENST00000525167 POLA1P09884 1462 aaPredicted RBP31.5■■■□□ 2.63
TSKU-202ENST00000525167 ARHGEF11O15085 1522 aa31.46■■■□□ 2.63
TSKU-202ENST00000525167 AQRO60306 1485 aaKnown RBP eCLIP31.46■■■□□ 2.63
TSKU-202ENST00000525167 CHD1O14646 1710 aa31.37■■■□□ 2.61
TSKU-202ENST00000525167 WDR97A6NE52 1622 aa31.35■■■□□ 2.61
TSKU-202ENST00000525167 SOGA1O94964 1423 aa31.34■■■□□ 2.61
TSKU-202ENST00000525167 RAD54L2Q9Y4B4 1467 aa31.33■■■□□ 2.61
TSKU-202ENST00000525167 FGD5Q6ZNL6 1462 aa31.28■■■□□ 2.6
TSKU-202ENST00000525167 TDRD9Q8NDG6 1382 aaKnown RBP31.26■■■□□ 2.59
TSKU-202ENST00000525167 CUX1P39880 1505 aa31.24■■■□□ 2.59
TSKU-202ENST00000525167 FBLN2P98095 1184 aa31.23■■■□□ 2.59
TSKU-202ENST00000525167 SNAPC4Q5SXM2 1469 aa31.17■■■□□ 2.58
TSKU-202ENST00000525167 CYB5RLQ6IPT4 315 aa31.16■■■□□ 2.58
TSKU-202ENST00000525167 MAGI1Q96QZ7 1491 aaPredicted RBP31.15■■■□□ 2.58
TSKU-202ENST00000525167 ARAP1Q96P48 1450 aa31.14■■■□□ 2.57
TSKU-202ENST00000525167 GRIN2BQ13224 1484 aa31.12■■■□□ 2.57
TSKU-202ENST00000525167 CLASP1Q7Z460 1538 aa31.08■■■□□ 2.57
TSKU-202ENST00000525167 SYNJ1O43426 1573 aa31.06■■■□□ 2.56
TSKU-202ENST00000525167 CHMP7Q8WUX9 453 aaPredicted RBP31.06■■■□□ 2.56
TSKU-202ENST00000525167 SYNJ2O15056 1496 aa31.03■■■□□ 2.56
TSKU-202ENST00000525167 GAPVD1Q14C86 1478 aa30.98■■■□□ 2.55
TSKU-202ENST00000525167 ABCA10Q8WWZ4 1543 aa30.97■■■□□ 2.55
TSKU-202ENST00000525167 PBRM1Q86U86 1689 aa30.96■■■□□ 2.55
TSKU-202ENST00000525167 SUPT5HO00267 1087 aaKnown RBP30.92■■■□□ 2.54
TSKU-202ENST00000525167 ABCA5Q8WWZ7 1642 aa30.91■■■□□ 2.54
TSKU-202ENST00000525167 TRHP20396 242 aaPredicted RBP30.84■■■□□ 2.53
TSKU-202ENST00000525167 WRNQ14191 1432 aaPredicted RBP eCLIP30.82■■■□□ 2.52
TSKU-202ENST00000525167 TOP2BQ02880 1626 aa30.76■■■□□ 2.51
TSKU-202ENST00000525167 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.51
TSKU-202ENST00000525167 GRIN2AQ12879 1464 aa30.71■■■□□ 2.51
TSKU-202ENST00000525167 ADAMTS12P58397 1594 aa30.68■■■□□ 2.5
TSKU-202ENST00000525167 NUP160Q12769 1436 aa30.63■■■□□ 2.49
TSKU-202ENST00000525167 FHAD1B1AJZ9 1412 aa30.61■■■□□ 2.49
TSKU-202ENST00000525167 ERICH3Q5RHP9 1530 aa30.6■■■□□ 2.49
TSKU-202ENST00000525167 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
TSKU-202ENST00000525167 SHROOM2Q13796 1616 aa30.51■■■□□ 2.47
TSKU-202ENST00000525167 ERCC6L2Q5T890 1561 aa30.49■■■□□ 2.47
TSKU-202ENST00000525167 PRG4Q92954 1404 aaPredicted RBP30.29■■■□□ 2.44
TSKU-202ENST00000525167 JPH4Q96JJ6 628 aa30.26■■■□□ 2.43
TSKU-202ENST00000525167 RUSC2Q8N2Y8 1516 aa30.26■■■□□ 2.43
TSKU-202ENST00000525167 KIF27Q86VH2 1401 aa30.16■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms