RNA–Protein interactions for RNA: ENST00000524057.3

SORBS3-222, Transcript of sorbin and SH3 domain containing 3, human

TSL 3

Gene SORBS3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SORBS3-222	ENST00000524057	HECW1	Q76N89	1606 aa		18.38	■□□□□ 0.53
SORBS3-222	ENST00000524057	GEMIN5	Q8TEQ6	1508 aa	Known RBP eCLIP	18.37	■□□□□ 0.53
SORBS3-222	ENST00000524057	ARHGEF12	Q9NZN5	1544 aa		18.37	■□□□□ 0.53
SORBS3-222	ENST00000524057	SAMD9	Q5K651	1589 aa		18.37	■□□□□ 0.53
SORBS3-222	ENST00000524057	PREX1	Q8TCU6	1659 aa		18.37	■□□□□ 0.53
SORBS3-222	ENST00000524057	SCAPER	Q9BY12	1400 aa		18.36	■□□□□ 0.53
SORBS3-222	ENST00000524057	ATP10A	O60312	1499 aa		18.35	■□□□□ 0.53
SORBS3-222	ENST00000524057	CFAP74	Q9C0B2	1584 aa		18.34	■□□□□ 0.53
SORBS3-222	ENST00000524057	PTPRT	O14522	1441 aa		18.33	■□□□□ 0.53
SORBS3-222	ENST00000524057	RANGAP1	P46060	587 aa	Predicted RBP	18.33	■□□□□ 0.52
SORBS3-222	ENST00000524057	UHRF1BP1	Q6BDS2	1440 aa		18.32	■□□□□ 0.52
SORBS3-222	ENST00000524057	C9orf84	Q5VXU9	1444 aa		18.3	■□□□□ 0.52
SORBS3-222	ENST00000524057	LTBP4	Q8N2S1	1624 aa		18.3	■□□□□ 0.52
SORBS3-222	ENST00000524057	PLCH2	O75038	1416 aa		18.29	■□□□□ 0.52
SORBS3-222	ENST00000524057	SETD1B	Q9UPS6	1966 aa	Known RBP	18.28	■□□□□ 0.52
SORBS3-222	ENST00000524057	CSRNP3	Q8WYN3	585 aa		18.27	■□□□□ 0.52
SORBS3-222	ENST00000524057	EFCAB2	Q5VUJ9	269 aa		18.25	■□□□□ 0.51
SORBS3-222	ENST00000524057	AFAP1	Q8N556	730 aa		18.24	■□□□□ 0.51
SORBS3-222	ENST00000524057	IQSEC2	Q5JU85	1478 aa		18.24	■□□□□ 0.51
SORBS3-222	ENST00000524057	UBAP1L	F5GYI3	381 aa		18.2	■□□□□ 0.5
SORBS3-222	ENST00000524057	MYT1L	Q9UL68	1186 aa		18.19	■□□□□ 0.5
SORBS3-222	ENST00000524057	TRAPPC8	Q9Y2L5	1435 aa		18.19	■□□□□ 0.5
SORBS3-222	ENST00000524057	NCOA1	Q15788	1441 aa		18.17	■□□□□ 0.5
SORBS3-222	ENST00000524057	ESF1	Q9H501	851 aa	Known RBP	18.17	■□□□□ 0.5
SORBS3-222	ENST00000524057	CDK13	Q14004	1512 aa	Known RBP	18.16	■□□□□ 0.5
SORBS3-222	ENST00000524057	C3	P01024	1663 aa		18.15	■□□□□ 0.5
SORBS3-222	ENST00000524057	ZNF518A	Q6AHZ1	1483 aa		18.14	■□□□□ 0.5
SORBS3-222	ENST00000524057	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	18.14	■□□□□ 0.49
SORBS3-222	ENST00000524057	NCKAP5L	Q9HCH0	1330 aa		18.14	■□□□□ 0.49
SORBS3-222	ENST00000524057	ATP1B4	Q9UN42	357 aa	Predicted RBP	18.11	■□□□□ 0.49
SORBS3-222	ENST00000524057	KDM5C	P41229	1560 aa		18.1	■□□□□ 0.49
SORBS3-222	ENST00000524057	DIP2C	Q9Y2E4	1556 aa		18.09	■□□□□ 0.49
SORBS3-222	ENST00000524057	RERE	Q9P2R6	1566 aa		18.08	■□□□□ 0.49
SORBS3-222	ENST00000524057	CDK11A	Q9UQ88	783 aa	Predicted RBP	18.08	■□□□□ 0.48
SORBS3-222	ENST00000524057	CAMSAP1	Q5T5Y3	1602 aa		18.08	■□□□□ 0.48
SORBS3-222	ENST00000524057	MLH3	Q9UHC1	1453 aa		18.07	■□□□□ 0.48
SORBS3-222	ENST00000524057	MYO5C	Q9NQX4	1742 aa		18.07	■□□□□ 0.48
SORBS3-222	ENST00000524057	HSPA1L	P34931	641 aa		18.06	■□□□□ 0.48
SORBS3-222	ENST00000524057	AGL	P35573	1532 aa		18.06	■□□□□ 0.48
SORBS3-222	ENST00000524057	ARHGAP5	Q13017	1502 aa		18.04	■□□□□ 0.48
SORBS3-222	ENST00000524057	ABCA6	Q8N139	1617 aa		18.04	■□□□□ 0.48
SORBS3-222	ENST00000524057	CNTLN	Q9NXG0	1405 aa		18.04	■□□□□ 0.48
SORBS3-222	ENST00000524057	ZMYM3	Q14202	1370 aa		18.04	■□□□□ 0.48
SORBS3-222	ENST00000524057	PKD2	Q13563	968 aa		18.03	■□□□□ 0.48
SORBS3-222	ENST00000524057	KIF14	Q15058	1648 aa		18.02	■□□□□ 0.48
SORBS3-222	ENST00000524057	NPAT	Q14207	1427 aa		18.02	■□□□□ 0.48
SORBS3-222	ENST00000524057	PIP4K2B	P78356	416 aa		18	■□□□□ 0.47
SORBS3-222	ENST00000524057	SCAF1	Q9H7N4	1312 aa	Known RBP	17.99	■□□□□ 0.47
SORBS3-222	ENST00000524057	CHIC1	Q5VXU3	224 aa		17.99	■□□□□ 0.47
SORBS3-222	ENST00000524057	TRO	Q12816	1431 aa	Predicted RBP	17.98	■□□□□ 0.47
SORBS3-222	ENST00000524057	MED1	Q15648	1581 aa	Predicted RBP	17.98	■□□□□ 0.47
SORBS3-222	ENST00000524057	TOM1	O60784	492 aa		17.96	■□□□□ 0.47
SORBS3-222	ENST00000524057	PPP6R1	Q9UPN7	881 aa		17.96	■□□□□ 0.47
SORBS3-222	ENST00000524057	PLA2R1	Q13018	1463 aa		17.95	■□□□□ 0.46
SORBS3-222	ENST00000524057	FMN1	Q68DA7	1419 aa		17.95	■□□□□ 0.46
SORBS3-222	ENST00000524057	TCOF1	Q13428	1488 aa	Known RBP	17.95	■□□□□ 0.46
SORBS3-222	ENST00000524057	CDC42BPB	Q9Y5S2	1711 aa		17.94	■□□□□ 0.46
SORBS3-222	ENST00000524057	CLIP1	P30622	1438 aa		17.93	■□□□□ 0.46
SORBS3-222	ENST00000524057	EEA1	Q15075	1411 aa		17.93	■□□□□ 0.46
SORBS3-222	ENST00000524057	PHF23	Q9BUL5	403 aa	Predicted RBP	17.93	■□□□□ 0.46
SORBS3-222	ENST00000524057	KIDINS220	Q9ULH0	1771 aa		17.93	■□□□□ 0.46
SORBS3-222	ENST00000524057	MROH2A	A6NES4	1674 aa		17.9	■□□□□ 0.46
SORBS3-222	ENST00000524057	ABCC1	P33527	1531 aa		17.9	■□□□□ 0.46
SORBS3-222	ENST00000524057	PTPRK	Q15262	1439 aa		17.89	■□□□□ 0.46
SORBS3-222	ENST00000524057	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	17.87	■□□□□ 0.45
SORBS3-222	ENST00000524057	GGT6	Q6P531	493 aa		17.87	■□□□□ 0.45
SORBS3-222	ENST00000524057	EHMT2	Q96KQ7	1210 aa		17.87	■□□□□ 0.45
SORBS3-222	ENST00000524057	ITSN2	Q9NZM3	1697 aa		17.87	■□□□□ 0.45
SORBS3-222	ENST00000524057	UBTF	P17480	764 aa	Known RBP	17.86	■□□□□ 0.45
SORBS3-222	ENST00000524057	ZNF777	Q9ULD5	760 aa	Predicted RBP	17.86	■□□□□ 0.45
SORBS3-222	ENST00000524057	SPAG9	O60271	1321 aa	Known RBP	17.86	■□□□□ 0.45
SORBS3-222	ENST00000524057	ARHGAP35	Q9NRY4	1499 aa		17.86	■□□□□ 0.45
SORBS3-222	ENST00000524057	MYO3A	Q8NEV4	1616 aa		17.86	■□□□□ 0.45
SORBS3-222	ENST00000524057	HNRNPM	P52272	730 aa	Known RBP eCLIP	17.85	■□□□□ 0.45
SORBS3-222	ENST00000524057	ZNF142	P52746	1687 aa	Predicted RBP	17.85	■□□□□ 0.45
SORBS3-222	ENST00000524057	CLTC	Q00610	1675 aa	Known RBP	17.83	■□□□□ 0.45
SORBS3-222	ENST00000524057	PREX2	Q70Z35	1606 aa		17.83	■□□□□ 0.45
SORBS3-222	ENST00000524057	SAMD9L	Q8IVG5	1584 aa		17.83	■□□□□ 0.45
SORBS3-222	ENST00000524057	SHANK2	Q9UPX8	1470 aa		17.83	■□□□□ 0.45
SORBS3-222	ENST00000524057	SUPT6H	Q7KZ85	1726 aa	Known RBP	17.83	■□□□□ 0.44
SORBS3-222	ENST00000524057	CPS1	P31327	1500 aa		17.82	■□□□□ 0.44
SORBS3-222	ENST00000524057	LRRIQ1	Q96JM4	1722 aa		17.81	■□□□□ 0.44
SORBS3-222	ENST00000524057	RGS17	Q9UGC6	210 aa	Predicted RBP	17.8	■□□□□ 0.44
SORBS3-222	ENST00000524057	A2ML1	A8K2U0	1454 aa		17.8	■□□□□ 0.44
SORBS3-222	ENST00000524057	SENP3	Q9H4L4	574 aa	Predicted RBP	17.79	■□□□□ 0.44
SORBS3-222	ENST00000524057	DNMT1	P26358	1616 aa	Known RBP	17.79	■□□□□ 0.44
SORBS3-222	ENST00000524057	A2M	P01023	1474 aa		17.77	■□□□□ 0.44
SORBS3-222	ENST00000524057	ALK	Q9UM73	1620 aa		17.77	■□□□□ 0.44
SORBS3-222	ENST00000524057	FBXO31	Q5XUX0	539 aa	Predicted RBP	17.77	■□□□□ 0.44
SORBS3-222	ENST00000524057	ANKLE2	Q86XL3	938 aa		17.76	■□□□□ 0.43
SORBS3-222	ENST00000524057	CDC42BPA	Q5VT25	1732 aa		17.75	■□□□□ 0.43
SORBS3-222	ENST00000524057	PLXNC1	O60486	1568 aa		17.74	■□□□□ 0.43
SORBS3-222	ENST00000524057	NEURL4	Q96JN8	1562 aa		17.74	■□□□□ 0.43
SORBS3-222	ENST00000524057	SYCP2	Q9BX26	1530 aa		17.74	■□□□□ 0.43
SORBS3-222	ENST00000524057	ATP7A	Q04656	1500 aa		17.73	■□□□□ 0.43
SORBS3-222	ENST00000524057	GPATCH8	Q9UKJ3	1502 aa	Known RBP	17.72	■□□□□ 0.43
SORBS3-222	ENST00000524057	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	17.72	■□□□□ 0.43	6e-6	■□□□□ 10.9
SORBS3-222	ENST00000524057	KIAA1107	Q9UPP5	1409 aa		17.72	■□□□□ 0.43
SORBS3-222	ENST00000524057	VWDE	Q8N2E2	1590 aa		17.71	■□□□□ 0.43
SORBS3-222	ENST00000524057	THEMIS	Q8N1K5	641 aa	Predicted RBP	17.71	■□□□□ 0.43

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