RNA–Protein interactions for RNA: ENST00000523555.5

PABPC1-222, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-222ENST00000523555 ARHGAP5Q13017 1502 aa15.31■□□□□ 0.04
PABPC1-222ENST00000523555 SIGLEC1Q9BZZ2 1709 aa15.29■□□□□ 0.04
PABPC1-222ENST00000523555 ZMYM4Q5VZL5 1548 aa15.27■□□□□ 0.04
PABPC1-222ENST00000523555 ARHGEF40Q8TER5 1519 aa15.27■□□□□ 0.04
PABPC1-222ENST00000523555 SCAPERQ9BY12 1400 aa15.27■□□□□ 0.04
PABPC1-222ENST00000523555 POGZQ7Z3K3 1410 aa15.26■□□□□ 0.03
PABPC1-222ENST00000523555 VPS8Q8N3P4 1428 aa15.26■□□□□ 0.03
PABPC1-222ENST00000523555 ITSN2Q9NZM3 1697 aa15.26■□□□□ 0.03
PABPC1-222ENST00000523555 EHBP1L1Q8N3D4 1523 aa15.25■□□□□ 0.03
PABPC1-222ENST00000523555 YEATS2Q9ULM3 1422 aa15.25■□□□□ 0.03
PABPC1-222ENST00000523555 TIAM1Q13009 1591 aa15.24■□□□□ 0.03
PABPC1-222ENST00000523555 SAMD9LQ8IVG5 1584 aa15.24■□□□□ 0.03
PABPC1-222ENST00000523555 ABCC1P33527 1531 aa15.24■□□□□ 0.03
PABPC1-222ENST00000523555 ARHGEF12Q9NZN5 1544 aa15.24■□□□□ 0.03
PABPC1-222ENST00000523555 EFCAB2Q5VUJ9 269 aa15.24■□□□□ 0.03
PABPC1-222ENST00000523555 GPATCH8Q9UKJ3 1502 aaKnown RBP15.23■□□□□ 0.03
PABPC1-222ENST00000523555 MTUS2Q5JR59 1369 aa15.23■□□□□ 0.03
PABPC1-222ENST00000523555 ZFYVE16Q7Z3T8 1539 aa15.22■□□□□ 0.03
PABPC1-222ENST00000523555 KDM5CP41229 1560 aa15.22■□□□□ 0.03
PABPC1-222ENST00000523555 BCORL1Q5H9F3 1711 aa15.21■□□□□ 0.03
PABPC1-222ENST00000523555 ADAMTSL3P82987 1691 aa15.2■□□□□ 0.02
PABPC1-222ENST00000523555 TRAPPC8Q9Y2L5 1435 aa15.19■□□□□ 0.02
PABPC1-222ENST00000523555 SUPT6HQ7KZ85 1726 aaKnown RBP15.19■□□□□ 0.02
PABPC1-222ENST00000523555 SYCP2Q9BX26 1530 aa15.18■□□□□ 0.02
PABPC1-222ENST00000523555 AFAP1Q8N556 730 aa15.18■□□□□ 0.02
PABPC1-222ENST00000523555 ZNF518AQ6AHZ1 1483 aa15.18■□□□□ 0.02
PABPC1-222ENST00000523555 HECW2Q9P2P5 1572 aa15.18■□□□□ 0.02
PABPC1-222ENST00000523555 ABCA6Q8N139 1617 aa15.17■□□□□ 0.02
PABPC1-222ENST00000523555 MAGI2Q86UL8 1455 aa15.17■□□□□ 0.02
PABPC1-222ENST00000523555 MADDQ8WXG6 1647 aa15.17■□□□□ 0.02
PABPC1-222ENST00000523555 KIDINS220Q9ULH0 1771 aa15.16■□□□□ 0.02
PABPC1-222ENST00000523555 DIP2CQ9Y2E4 1556 aa15.16■□□□□ 0.02
PABPC1-222ENST00000523555 NCOA2Q15596 1464 aa15.16■□□□□ 0.02
PABPC1-222ENST00000523555 CCNB3Q8WWL7 1395 aa15.16■□□□□ 0.02
PABPC1-222ENST00000523555 ZNF777Q9ULD5 760 aaPredicted RBP15.16■□□□□ 0.02
PABPC1-222ENST00000523555 LRRC9Q6ZRR7 1453 aa15.15■□□□□ 0.02
PABPC1-222ENST00000523555 KANK4Q5T7N3 995 aaPredicted RBP15.14■□□□□ 0.01
PABPC1-222ENST00000523555 ZNF644Q9H582 1327 aaPredicted RBP15.13■□□□□ 0.01
PABPC1-222ENST00000523555 RIMS1Q86UR5 1692 aaKnown RBP15.12■□□□□ 0.01
PABPC1-222ENST00000523555 MAP3K1Q13233 1512 aa15.12■□□□□ 0.01
PABPC1-222ENST00000523555 ARID4BQ4LE39 1312 aaPredicted RBP15.12■□□□□ 0.01
PABPC1-222ENST00000523555 HNRNPMP52272 730 aaKnown RBP eCLIP15.11■□□□□ 0.01
PABPC1-222ENST00000523555 CFDP1Q9UEE9 299 aaPredicted RBP15.11■□□□□ 0.01
PABPC1-222ENST00000523555 ATP10AO60312 1499 aa15.11■□□□□ 0.01
PABPC1-222ENST00000523555 MLH3Q9UHC1 1453 aa15.11■□□□□ 0.01
PABPC1-222ENST00000523555 C9orf84Q5VXU9 1444 aa15.1■□□□□ 0.01
PABPC1-222ENST00000523555 FER1L4A9Z1Z3 1794 aa15.1■□□□□ 0.01
PABPC1-222ENST00000523555 INO80Q9ULG1 1556 aaPredicted RBP15.09■□□□□ 0.01
PABPC1-222ENST00000523555 PTPRMP28827 1452 aa15.08■□□□□ 0.01
PABPC1-222ENST00000523555 KIAA1107Q9UPP5 1409 aa15.08■□□□□ 0
PABPC1-222ENST00000523555 MBD5Q9P267 1494 aa15.08■□□□□ 0
PABPC1-222ENST00000523555 REREQ9P2R6 1566 aa15.07■□□□□ 0
PABPC1-222ENST00000523555 MYT1LQ9UL68 1186 aa15.07■□□□□ 0
PABPC1-222ENST00000523555 CAMSAP2Q08AD1 1489 aa15.07■□□□□ 0
PABPC1-222ENST00000523555 MLECQ14165 292 aa15.06■□□□□ 0
PABPC1-222ENST00000523555 PLEKHH2Q8IVE3 1493 aa15.06■□□□□ 0
PABPC1-222ENST00000523555 ATP7AQ04656 1500 aa15.06■□□□□ 0
PABPC1-222ENST00000523555 ADGBQ8N7X0 1667 aa15.03■□□□□ -0
PABPC1-222ENST00000523555 SPAG9O60271 1321 aaKnown RBP15.02■□□□□ -0
PABPC1-222ENST00000523555 PLXNC1O60486 1568 aa15.01□□□□□ -0.01
PABPC1-222ENST00000523555 AGLP35573 1532 aa15.01□□□□□ -0.01
PABPC1-222ENST00000523555 MYOM3Q5VTT5 1437 aa15□□□□□ -0.01
PABPC1-222ENST00000523555 ARHGEF5Q12774 1597 aa14.99□□□□□ -0.01
PABPC1-222ENST00000523555 CCDC141Q6ZP82 1450 aa14.99□□□□□ -0.01
PABPC1-222ENST00000523555 PLPPR3Q6T4P5 718 aa14.98□□□□□ -0.01
PABPC1-222ENST00000523555 A2MP01023 1474 aa14.96□□□□□ -0.01
PABPC1-222ENST00000523555 PTPN23Q9H3S7 1636 aa14.96□□□□□ -0.01
PABPC1-222ENST00000523555 APLP2Q06481 763 aa14.96□□□□□ -0.01
PABPC1-222ENST00000523555 C3P01024 1663 aa14.96□□□□□ -0.01
PABPC1-222ENST00000523555 MIA2Q96PC5 1412 aa14.95□□□□□ -0.02
PABPC1-222ENST00000523555 CROCC2H7BZ55 1655 aa14.94□□□□□ -0.02
PABPC1-222ENST00000523555 RTEL1-TNFRSF6BF6WH68 1400 aa14.94□□□□□ -0.02
PABPC1-222ENST00000523555 CEBPAP49715 358 aaPredicted RBP14.93□□□□□ -0.02
PABPC1-222ENST00000523555 MAST1Q9Y2H9 1570 aa14.93□□□□□ -0.02
PABPC1-222ENST00000523555 CLTCQ00610 1675 aaKnown RBP14.93□□□□□ -0.02
PABPC1-222ENST00000523555 LMTK3Q96Q04 1460 aa14.92□□□□□ -0.02
PABPC1-222ENST00000523555 FGD6Q6ZV73 1430 aa14.91□□□□□ -0.02
PABPC1-222ENST00000523555 MROH2AA6NES4 1674 aa14.9□□□□□ -0.02
PABPC1-222ENST00000523555 TCOF1Q13428 1488 aaKnown RBP14.89□□□□□ -0.03
PABPC1-222ENST00000523555 DNMT1P26358 1616 aaKnown RBP14.89□□□□□ -0.03
PABPC1-222ENST00000523555 PREX1Q8TCU6 1659 aa14.89□□□□□ -0.03
PABPC1-222ENST00000523555 DHX29Q7Z478 1369 aaKnown RBP14.88□□□□□ -0.03
PABPC1-222ENST00000523555 ABCC5O15440 1437 aa14.87□□□□□ -0.03
PABPC1-222ENST00000523555 RSPH4AQ5TD94 716 aa14.87□□□□□ -0.03
PABPC1-222ENST00000523555 PPARGC1BQ86YN6 1023 aaKnown RBP14.86□□□□□ -0.03
PABPC1-222ENST00000523555 DAPK1P53355 1430 aa14.85□□□□□ -0.03
PABPC1-222ENST00000523555 TSPY4P0CV99 314 aa14.85□□□□□ -0.03
PABPC1-222ENST00000523555 TSPY10P0CW01 314 aa14.85□□□□□ -0.03
PABPC1-222ENST00000523555 GGT6Q6P531 493 aa14.85□□□□□ -0.03
PABPC1-222ENST00000523555 SETD1BQ9UPS6 1966 aaKnown RBP14.84□□□□□ -0.03
PABPC1-222ENST00000523555 SHANK2Q9UPX8 1470 aa14.83□□□□□ -0.03
PABPC1-222ENST00000523555 HSPA2P54652 639 aa14.83□□□□□ -0.04
PABPC1-222ENST00000523555 CNTLNQ9NXG0 1405 aa14.83□□□□□ -0.04
PABPC1-222ENST00000523555 MROH1Q8NDA8 1641 aa14.82□□□□□ -0.04
PABPC1-222ENST00000523555 RNF17Q9BXT8 1623 aaKnown RBP14.82□□□□□ -0.04
PABPC1-222ENST00000523555 KIF3BO15066 747 aa14.82□□□□□ -0.04
PABPC1-222ENST00000523555 EIF2AK4Q9P2K8 1649 aaKnown RBP14.81□□□□□ -0.04
PABPC1-222ENST00000523555 ZMYM3Q14202 1370 aa14.81□□□□□ -0.04
PABPC1-222ENST00000523555 ESF1Q9H501 851 aaKnown RBP14.8□□□□□ -0.04
PABPC1-222ENST00000523555 CEP152O94986 1710 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms