RNA–Protein interactions for RNA: ENST00000522653.5

TCF7-223, Transcript of transcription factor 7, human

TSL 2

Gene TCF7, Length 5,340 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF7-223	ENST00000522653	TMF1	P82094	1093 aa		13.33	□□□□□ -0.28
TCF7-223	ENST00000522653	OS9	Q13438	667 aa	Predicted RBP	13.32	□□□□□ -0.28
TCF7-223	ENST00000522653	WASHC2C	Q9Y4E1	1318 aa		13.32	□□□□□ -0.28
TCF7-223	ENST00000522653	EVA1C	P58658	441 aa		13.32	□□□□□ -0.28
TCF7-223	ENST00000522653	CARD11	Q9BXL7	1154 aa		13.31	□□□□□ -0.28
TCF7-223	ENST00000522653	POGZ	Q7Z3K3	1410 aa		13.3	□□□□□ -0.28
TCF7-223	ENST00000522653	PPP4R2	Q9NY27	417 aa		13.3	□□□□□ -0.28
TCF7-223	ENST00000522653	ANKRD30A	Q9BXX3	1397 aa		13.29	□□□□□ -0.28
TCF7-223	ENST00000522653	UACA	Q9BZF9	1416 aa		13.29	□□□□□ -0.28
TCF7-223	ENST00000522653	NGDN	Q8NEJ9	315 aa	Known RBP	13.28	□□□□□ -0.28
TCF7-223	ENST00000522653	FAM69C	Q0P6D2	419 aa		13.28	□□□□□ -0.28
TCF7-223	ENST00000522653	PTPRG	P23470	1445 aa		13.27	□□□□□ -0.29
TCF7-223	ENST00000522653	GTF2E1	P29083	439 aa	Predicted RBP	13.27	□□□□□ -0.29
TCF7-223	ENST00000522653	TERF2IP	Q9NYB0	399 aa		13.27	□□□□□ -0.29
TCF7-223	ENST00000522653	ATF3	P18847	181 aa		13.26	□□□□□ -0.29
TCF7-223	ENST00000522653	JPH4	Q96JJ6	628 aa		13.26	□□□□□ -0.29
TCF7-223	ENST00000522653	MRS2	Q9HD23	443 aa		13.25	□□□□□ -0.29
TCF7-223	ENST00000522653	MROH2B	Q7Z745	1585 aa		13.24	□□□□□ -0.29
TCF7-223	ENST00000522653	DMRT2	Q9Y5R5	561 aa		13.24	□□□□□ -0.29
TCF7-223	ENST00000522653	FTSJ3	Q8IY81	847 aa	Known RBP	13.24	□□□□□ -0.29
TCF7-223	ENST00000522653	KRI1	Q8N9T8	703 aa	Known RBP	13.24	□□□□□ -0.29
TCF7-223	ENST00000522653	MSH5	O43196	834 aa		13.23	□□□□□ -0.29
TCF7-223	ENST00000522653	ISY1	Q9ULR0	285 aa	Known RBP	13.23	□□□□□ -0.29
TCF7-223	ENST00000522653	KIF3B	O15066	747 aa		13.23	□□□□□ -0.29
TCF7-223	ENST00000522653	TNNT2	P45379	298 aa	Predicted RBP	13.23	□□□□□ -0.29
TCF7-223	ENST00000522653	TRIM44	Q96DX7	344 aa	Predicted RBP	13.23	□□□□□ -0.29
TCF7-223	ENST00000522653	CCDC18	Q5T9S5	1454 aa		13.23	□□□□□ -0.29
TCF7-223	ENST00000522653	NAP1L5	Q96NT1	182 aa	Predicted RBP	13.22	□□□□□ -0.29
TCF7-223	ENST00000522653	BECN1	Q14457	450 aa		13.2	□□□□□ -0.3
TCF7-223	ENST00000522653	FGD1	P98174	961 aa		13.2	□□□□□ -0.3
TCF7-223	ENST00000522653	CCDC88B	A6NC98	1476 aa		13.19	□□□□□ -0.3
TCF7-223	ENST00000522653	LMOD3	Q0VAK6	560 aa		13.19	□□□□□ -0.3
TCF7-223	ENST00000522653	WWC1	Q8IX03	1113 aa		13.19	□□□□□ -0.3
TCF7-223	ENST00000522653	TDRD9	Q8NDG6	1382 aa	Known RBP	13.19	□□□□□ -0.3
TCF7-223	ENST00000522653	U2SURP	O15042	1029 aa	Known RBP	13.18	□□□□□ -0.3
TCF7-223	ENST00000522653	MORC1	Q86VD1	984 aa		13.18	□□□□□ -0.3
TCF7-223	ENST00000522653	TAF7L	Q5H9L4	462 aa		13.18	□□□□□ -0.3
TCF7-223	ENST00000522653	LAS1L	Q9Y4W2	734 aa	Known RBP	13.18	□□□□□ -0.3
TCF7-223	ENST00000522653	VGF	O15240	615 aa	Predicted RBP	13.18	□□□□□ -0.3
TCF7-223	ENST00000522653	GOLGA6L22	H0YM25	854 aa		13.17	□□□□□ -0.3
TCF7-223	ENST00000522653	TOP2A	P11388	1531 aa	Known RBP	13.16	□□□□□ -0.3
TCF7-223	ENST00000522653	CWC22	Q9HCG8	908 aa	Known RBP	13.16	□□□□□ -0.3
TCF7-223	ENST00000522653	PSME1	Q06323	249 aa		13.16	□□□□□ -0.3
TCF7-223	ENST00000522653	HSP90B1	P14625	803 aa	Known RBP	13.15	□□□□□ -0.3
TCF7-223	ENST00000522653	KCNJ4	P48050	445 aa		13.15	□□□□□ -0.3
TCF7-223	ENST00000522653	STK26	Q9P289	416 aa		13.15	□□□□□ -0.3
TCF7-223	ENST00000522653	AMPH	P49418	695 aa		13.15	□□□□□ -0.31
TCF7-223	ENST00000522653	ARHGAP35	Q9NRY4	1499 aa		13.14	□□□□□ -0.31
TCF7-223	ENST00000522653	NOL10	Q9BSC4	688 aa	Known RBP	13.14	□□□□□ -0.31
TCF7-223	ENST00000522653	CTDP1	Q9Y5B0	961 aa	Predicted RBP	13.14	□□□□□ -0.31
TCF7-223	ENST00000522653	L1TD1	Q5T7N2	865 aa	Known RBP	13.14	□□□□□ -0.31
TCF7-223	ENST00000522653	FANCD2	Q9BXW9	1451 aa		13.14	□□□□□ -0.31
TCF7-223	ENST00000522653	CLSTN1	O94985	981 aa		13.13	□□□□□ -0.31
TCF7-223	ENST00000522653	AMOTL1	Q8IY63	956 aa		13.13	□□□□□ -0.31
TCF7-223	ENST00000522653	TRIM34	Q9BYJ4	488 aa		13.13	□□□□□ -0.31
TCF7-223	ENST00000522653	ATAD2B	Q9ULI0	1458 aa		13.12	□□□□□ -0.31
TCF7-223	ENST00000522653	SETD5	Q9C0A6	1442 aa		13.12	□□□□□ -0.31
TCF7-223	ENST00000522653	GOLGA6L6	A8MZA4	724 aa		13.12	□□□□□ -0.31
TCF7-223	ENST00000522653	STK31	Q9BXU1	1019 aa		13.12	□□□□□ -0.31
TCF7-223	ENST00000522653	GORAB	Q5T7V8	394 aa		13.12	□□□□□ -0.31
TCF7-223	ENST00000522653	MCC	P23508	829 aa		13.12	□□□□□ -0.31
TCF7-223	ENST00000522653	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.12	□□□□□ -0.31
TCF7-223	ENST00000522653	TIMELESS	Q9UNS1	1208 aa		13.12	□□□□□ -0.31
TCF7-223	ENST00000522653	ZNF330	Q9Y3S2	320 aa	Predicted RBP	13.12	□□□□□ -0.31
TCF7-223	ENST00000522653	C1orf141	Q5JVX7	400 aa		13.11	□□□□□ -0.31
TCF7-223	ENST00000522653	CCER2	I3L3R5	266 aa		13.11	□□□□□ -0.31
TCF7-223	ENST00000522653	IPO8	O15397	1037 aa	Known RBP	13.11	□□□□□ -0.31
TCF7-223	ENST00000522653	GPATCH3	Q96I76	525 aa		13.11	□□□□□ -0.31
TCF7-223	ENST00000522653	VPS8	Q8N3P4	1428 aa		13.1	□□□□□ -0.31
TCF7-223	ENST00000522653	SOX12	O15370	315 aa		13.1	□□□□□ -0.31
TCF7-223	ENST00000522653	TULP1	O00294	542 aa	Predicted RBP	13.1	□□□□□ -0.31
TCF7-223	ENST00000522653	CCDC34	Q96HJ3	373 aa		13.1	□□□□□ -0.31
TCF7-223	ENST00000522653	STAC3	Q96MF2	364 aa		13.1	□□□□□ -0.31
TCF7-223	ENST00000522653	DCAF11	Q8TEB1	546 aa		13.09	□□□□□ -0.31
TCF7-223	ENST00000522653	SMARCA4	P51532	1647 aa		13.09	□□□□□ -0.31
TCF7-223	ENST00000522653	NRDC	O43847	1150 aa		13.09	□□□□□ -0.31
TCF7-223	ENST00000522653	CHMP4C	Q96CF2	233 aa		13.09	□□□□□ -0.31
TCF7-223	ENST00000522653	THEMIS	Q8N1K5	641 aa	Predicted RBP	13.08	□□□□□ -0.32
TCF7-223	ENST00000522653	SMC4	Q9NTJ3	1288 aa		13.08	□□□□□ -0.32
TCF7-223	ENST00000522653	RAPGEF2	Q9Y4G8	1499 aa		13.08	□□□□□ -0.32
TCF7-223	ENST00000522653	B4GALNT3	Q6L9W6	998 aa		13.08	□□□□□ -0.32
TCF7-223	ENST00000522653	FRAT2	O75474	233 aa	Predicted RBP	13.07	□□□□□ -0.32
TCF7-223	ENST00000522653	HIRIP3	Q9BW71	556 aa	Predicted RBP	13.07	□□□□□ -0.32
TCF7-223	ENST00000522653	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.07	□□□□□ -0.32
TCF7-223	ENST00000522653	SALL2	Q9Y467	1007 aa	Predicted RBP	13.07	□□□□□ -0.32
TCF7-223	ENST00000522653	WDHD1	O75717	1129 aa	Predicted RBP	13.06	□□□□□ -0.32
TCF7-223	ENST00000522653	KLHL34	Q8N239	644 aa		13.06	□□□□□ -0.32
TCF7-223	ENST00000522653	TTC5	Q8N0Z6	440 aa		13.06	□□□□□ -0.32
TCF7-223	ENST00000522653	NUP155	O75694	1391 aa		13.05	□□□□□ -0.32
TCF7-223	ENST00000522653	WIZ	O95785	1651 aa		13.05	□□□□□ -0.32
TCF7-223	ENST00000522653	FANCI	Q9NVI1	1328 aa		13.03	□□□□□ -0.32
TCF7-223	ENST00000522653	CHAF1A	Q13111	956 aa	Predicted RBP	13.03	□□□□□ -0.32
TCF7-223	ENST00000522653	SAFB2	Q14151	953 aa	Known RBP eCLIP	13.03	□□□□□ -0.32
TCF7-223	ENST00000522653	GPRASP1	Q5JY77	1395 aa		13.03	□□□□□ -0.32
TCF7-223	ENST00000522653	GNL2	Q13823	731 aa	Known RBP	13.02	□□□□□ -0.33
TCF7-223	ENST00000522653	RSPH6A	Q9H0K4	717 aa		13.02	□□□□□ -0.33
TCF7-223	ENST00000522653	MRC2	Q9UBG0	1479 aa		13.01	□□□□□ -0.33
TCF7-223	ENST00000522653	IPO9	Q96P70	1041 aa	Known RBP	13.01	□□□□□ -0.33
TCF7-223	ENST00000522653	PRKCSH	P14314	528 aa	Predicted RBP	13.01	□□□□□ -0.33
TCF7-223	ENST00000522653	PKD2	Q13563	968 aa		13.01	□□□□□ -0.33

Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms