RNA–Protein interactions for RNA: ENST00000522275.5

PCM1-215, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-215ENST00000522275 CFAP44Q96MT7 982 aa6.13□□□□□ -1.43
PCM1-215ENST00000522275 SLC52A1Q9NWF4 448 aa6.13□□□□□ -1.43
PCM1-215ENST00000522275 HDAC5Q9UQL6 1122 aa6.13□□□□□ -1.43
PCM1-215ENST00000522275 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.13□□□□□ -1.43
PCM1-215ENST00000522275 ANP32BQ92688 251 aaKnown RBP6.12□□□□□ -1.43
PCM1-215ENST00000522275 CLGNO14967 610 aa6.11□□□□□ -1.43
PCM1-215ENST00000522275 TPM2P07951 284 aa6.11□□□□□ -1.43
PCM1-215ENST00000522275 MMP14P50281 582 aa6.11□□□□□ -1.43
PCM1-215ENST00000522275 FAM43BQ6ZT52 329 aaPredicted RBP6.11□□□□□ -1.43
PCM1-215ENST00000522275 FOXD4L1Q9NU39 408 aa6.11□□□□□ -1.43
PCM1-215ENST00000522275 TICAM2Q86XR7 235 aa6.11□□□□□ -1.43
PCM1-215ENST00000522275 BAZ1BQ9UIG0 1483 aaKnown RBP6.11□□□□□ -1.43
PCM1-215ENST00000522275 E9PSI1 815 aa6.1□□□□□ -1.43
PCM1-215ENST00000522275 DMTNQ08495 405 aa6.1□□□□□ -1.43
PCM1-215ENST00000522275 MYCNP04198 464 aaPredicted RBP6.1□□□□□ -1.43
PCM1-215ENST00000522275 GRIPAP1Q4V328 841 aa6.1□□□□□ -1.43
PCM1-215ENST00000522275 APPP05067 770 aa6.09□□□□□ -1.43
PCM1-215ENST00000522275 DNTTIP2Q5QJE6 756 aaKnown RBP6.09□□□□□ -1.43
PCM1-215ENST00000522275 ZNF592Q92610 1267 aa6.09□□□□□ -1.43
PCM1-215ENST00000522275 PTMAP06454 111 aaKnown RBP6.08□□□□□ -1.44
PCM1-215ENST00000522275 TNNT2P45379 298 aaPredicted RBP6.08□□□□□ -1.44
PCM1-215ENST00000522275 PSEN1P49768 467 aa6.08□□□□□ -1.44
PCM1-215ENST00000522275 MAP7D2Q96T17 732 aa6.08□□□□□ -1.44
PCM1-215ENST00000522275 KIF20AO95235 890 aa6.07□□□□□ -1.44
PCM1-215ENST00000522275 CERS3Q8IU89 383 aa6.07□□□□□ -1.44
PCM1-215ENST00000522275 ZNF622Q969S3 477 aaKnown RBP eCLIP6.07□□□□□ -1.445e-8■■□□□ 13.4
PCM1-215ENST00000522275 SOX12O15370 315 aa6.06□□□□□ -1.44
PCM1-215ENST00000522275 ZSCAN20P17040 1043 aaPredicted RBP6.06□□□□□ -1.44
PCM1-215ENST00000522275 UBTFP17480 764 aaKnown RBP6.06□□□□□ -1.44
PCM1-215ENST00000522275 L1TD1Q5T7N2 865 aaKnown RBP6.05□□□□□ -1.44
PCM1-215ENST00000522275 NGEFQ8N5V2 710 aa6.05□□□□□ -1.44
PCM1-215ENST00000522275 SLC4A2P04920 1241 aa6.04□□□□□ -1.44
PCM1-215ENST00000522275 TMEM132AQ24JP5 1023 aa6.04□□□□□ -1.44
PCM1-215ENST00000522275 PLCD4Q9BRC7 762 aa6.04□□□□□ -1.44
PCM1-215ENST00000522275 FRAT2O75474 233 aaPredicted RBP6.03□□□□□ -1.44
PCM1-215ENST00000522275 AXDND1Q5T1B0 1012 aaPredicted RBP6.03□□□□□ -1.44
PCM1-215ENST00000522275 AEBP1Q8IUX7 1158 aa6.03□□□□□ -1.44
PCM1-215ENST00000522275 P3H3Q8IVL6 736 aa6.03□□□□□ -1.44
PCM1-215ENST00000522275 FAM13BQ9NYF5 915 aa6.03□□□□□ -1.44
PCM1-215ENST00000522275 CLSTN1O94985 981 aa6.03□□□□□ -1.44
PCM1-215ENST00000522275 MCCP23508 829 aa6.03□□□□□ -1.44
PCM1-215ENST00000522275 TAF3Q5VWG9 929 aa6.03□□□□□ -1.44
PCM1-215ENST00000522275 KIAA1211Q6ZU35 1233 aa6.03□□□□□ -1.44
PCM1-215ENST00000522275 LETM1O95202 739 aaPredicted RBP6.02□□□□□ -1.45
PCM1-215ENST00000522275 PTMSP20962 102 aa6.02□□□□□ -1.45
PCM1-215ENST00000522275 RIPK4P57078 832 aa6.02□□□□□ -1.45
PCM1-215ENST00000522275 CHMP4CQ96CF2 233 aa6.02□□□□□ -1.45
PCM1-215ENST00000522275 GTPBP4Q9BZE4 634 aaKnown RBP6.02□□□□□ -1.45
PCM1-215ENST00000522275 PHF14O94880 888 aa6.01□□□□□ -1.45
PCM1-215ENST00000522275 ARID3AQ99856 593 aa6.01□□□□□ -1.45
PCM1-215ENST00000522275 ESPNB1AK53 854 aa6.01□□□□□ -1.45
PCM1-215ENST00000522275 CCER2I3L3R5 266 aa6.01□□□□□ -1.45
PCM1-215ENST00000522275 CC2D1BQ5T0F9 858 aaKnown RBP6□□□□□ -1.45
PCM1-215ENST00000522275 PRR29P0C7W0 189 aa6□□□□□ -1.45
PCM1-215ENST00000522275 XRCC6P12956 609 aaKnown RBP eCLIP6□□□□□ -1.45
PCM1-215ENST00000522275 SLC20A2Q08357 652 aa6□□□□□ -1.45
PCM1-215ENST00000522275 MTERF4Q7Z6M4 381 aaKnown RBP6□□□□□ -1.45
PCM1-215ENST00000522275 CARD10Q9BWT7 1032 aa6□□□□□ -1.45
PCM1-215ENST00000522275 EEA1Q15075 1411 aa5.99□□□□□ -1.45
PCM1-215ENST00000522275 IRX5P78411 483 aaPredicted RBP5.99□□□□□ -1.45
PCM1-215ENST00000522275 OS9Q13438 667 aaPredicted RBP5.99□□□□□ -1.45
PCM1-215ENST00000522275 DNAJC2Q99543 621 aaKnown RBP5.99□□□□□ -1.45
PCM1-215ENST00000522275 POGKQ9P215 609 aa5.99□□□□□ -1.45
PCM1-215ENST00000522275 CGNQ9P2M7 1197 aaKnown RBP5.99□□□□□ -1.45
PCM1-215ENST00000522275 ERBB4Q15303 1308 aa5.98□□□□□ -1.45
PCM1-215ENST00000522275 HMGB1P09429 215 aaKnown RBP5.98□□□□□ -1.45
PCM1-215ENST00000522275 DDX10Q13206 875 aaKnown RBP5.98□□□□□ -1.45
PCM1-215ENST00000522275 RALBP1Q15311 655 aa5.98□□□□□ -1.45
PCM1-215ENST00000522275 SLC4A3P48751 1232 aa5.98□□□□□ -1.45
PCM1-215ENST00000522275 TERF1P54274 439 aa5.98□□□□□ -1.45
PCM1-215ENST00000522275 HNRNPUQ00839 825 aaKnown RBP eCLIP5.98□□□□□ -1.45
PCM1-215ENST00000522275 EGFL6Q8IUX8 553 aa5.98□□□□□ -1.45
PCM1-215ENST00000522275 TMC1Q8TDI8 760 aa5.98□□□□□ -1.45
PCM1-215ENST00000522275 ZBTB9Q96C00 473 aa5.98□□□□□ -1.45
PCM1-215ENST00000522275 PDE4AP27815 886 aa5.97□□□□□ -1.45
PCM1-215ENST00000522275 SIN3AQ96ST3 1273 aa5.97□□□□□ -1.45
PCM1-215ENST00000522275 PSMD1Q99460 953 aa5.97□□□□□ -1.45
PCM1-215ENST00000522275 CCDC94Q9BW85 323 aaPredicted RBP5.97□□□□□ -1.45
PCM1-215ENST00000522275 PANK2Q9BZ23 570 aa5.97□□□□□ -1.45
PCM1-215ENST00000522275 GEMIN8Q9NWZ8 242 aaKnown RBP5.97□□□□□ -1.45
PCM1-215ENST00000522275 EP400NLQ6ZTU2 488 aa5.96□□□□□ -1.45
PCM1-215ENST00000522275 TRIM44Q96DX7 344 aaPredicted RBP5.96□□□□□ -1.45
PCM1-215ENST00000522275 BACH2Q9BYV9 841 aa5.96□□□□□ -1.46
PCM1-215ENST00000522275 YY1AP1Q9H869 796 aa5.96□□□□□ -1.46
PCM1-215ENST00000522275 PRDM16Q9HAZ2 1276 aa5.96□□□□□ -1.46
PCM1-215ENST00000522275 SH3BP1Q9Y3L3 701 aa5.96□□□□□ -1.46
PCM1-215ENST00000522275 NACADO15069 1562 aa5.95□□□□□ -1.46
PCM1-215ENST00000522275 TRHP20396 242 aaPredicted RBP5.95□□□□□ -1.46
PCM1-215ENST00000522275 GOLGA6L3A6NEY3 463 aa5.95□□□□□ -1.46
PCM1-215ENST00000522275 IRF6O14896 467 aa5.95□□□□□ -1.46
PCM1-215ENST00000522275 HNRNPUL2Q1KMD3 747 aaKnown RBP5.95□□□□□ -1.46
PCM1-215ENST00000522275 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP5.94□□□□□ -1.46
PCM1-215ENST00000522275 ANP32CO43423 234 aa5.94□□□□□ -1.46
PCM1-215ENST00000522275 PUS7Q96PZ0 661 aaKnown RBP5.94□□□□□ -1.46
PCM1-215ENST00000522275 OFD1O75665 1012 aa5.94□□□□□ -1.46
PCM1-215ENST00000522275 KCNJ4P48050 445 aa5.94□□□□□ -1.46
PCM1-215ENST00000522275 MPNDQ8N594 471 aa5.94□□□□□ -1.46
PCM1-215ENST00000522275 LOC102724159A0A0B4J2E5 919 aa5.93□□□□□ -1.46
PCM1-215ENST00000522275 PWP2Q15269 919 aaKnown RBP5.93□□□□□ -1.46
PCM1-215ENST00000522275 ZNF526Q8TF50 670 aaPredicted RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms