RNA–Protein interactions for RNA: ENST00000521569.1

SPARC-204, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 602 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-204ENST00000521569 HECW1Q76N89 1606 aa14.14□□□□□ -0.15
SPARC-204ENST00000521569 ARHGEF12Q9NZN5 1544 aa14.14□□□□□ -0.15
SPARC-204ENST00000521569 TROQ12816 1431 aaPredicted RBP14.14□□□□□ -0.15
SPARC-204ENST00000521569 C9orf84Q5VXU9 1444 aa14.14□□□□□ -0.15
SPARC-204ENST00000521569 UBTFP17480 764 aaKnown RBP14.13□□□□□ -0.15
SPARC-204ENST00000521569 ZNF518AQ6AHZ1 1483 aa14.12□□□□□ -0.15
SPARC-204ENST00000521569 HSPA2P54652 639 aa14.09□□□□□ -0.15
SPARC-204ENST00000521569 RIMS1Q86UR5 1692 aaKnown RBP14.09□□□□□ -0.15
SPARC-204ENST00000521569 KDM5CP41229 1560 aa14.09□□□□□ -0.15
SPARC-204ENST00000521569 CLIP1P30622 1438 aa14.08□□□□□ -0.15
SPARC-204ENST00000521569 MLH3Q9UHC1 1453 aa14.08□□□□□ -0.16
SPARC-204ENST00000521569 SIGLEC1Q9BZZ2 1709 aa14.08□□□□□ -0.16
SPARC-204ENST00000521569 AFAP1Q8N556 730 aa14.08□□□□□ -0.16
SPARC-204ENST00000521569 REREQ9P2R6 1566 aa14.08□□□□□ -0.16
SPARC-204ENST00000521569 CHIC1Q5VXU3 224 aa14.07□□□□□ -0.16
SPARC-204ENST00000521569 DMRT2Q9Y5R5 561 aa14.07□□□□□ -0.16
SPARC-204ENST00000521569 CERKQ8TCT0 537 aa14.06□□□□□ -0.16
SPARC-204ENST00000521569 MLECQ14165 292 aa14.05□□□□□ -0.16
SPARC-204ENST00000521569 CASKIN1Q8WXD9 1431 aa14.05□□□□□ -0.16
SPARC-204ENST00000521569 AGLP35573 1532 aa14.05□□□□□ -0.16
SPARC-204ENST00000521569 KIF14Q15058 1648 aa14.04□□□□□ -0.16
SPARC-204ENST00000521569 ATP1B4Q9UN42 357 aaPredicted RBP14.03□□□□□ -0.16
SPARC-204ENST00000521569 ARHGAP5Q13017 1502 aa14.02□□□□□ -0.16
SPARC-204ENST00000521569 CCDC18Q5T9S5 1454 aa14.02□□□□□ -0.16
SPARC-204ENST00000521569 MYO5CQ9NQX4 1742 aa14.01□□□□□ -0.17
SPARC-204ENST00000521569 UHRF1BP1Q6BDS2 1440 aa13.99□□□□□ -0.17
SPARC-204ENST00000521569 CNTLNQ9NXG0 1405 aa13.99□□□□□ -0.17
SPARC-204ENST00000521569 FER1L4A9Z1Z3 1794 aa13.99□□□□□ -0.17
SPARC-204ENST00000521569 CEBPAP49715 358 aaPredicted RBP13.99□□□□□ -0.17
SPARC-204ENST00000521569 PTPRTO14522 1441 aa13.98□□□□□ -0.17
SPARC-204ENST00000521569 TRAPPC8Q9Y2L5 1435 aa13.98□□□□□ -0.17
SPARC-204ENST00000521569 DIP2CQ9Y2E4 1556 aa13.98□□□□□ -0.17
SPARC-204ENST00000521569 SETD1BQ9UPS6 1966 aaKnown RBP13.98□□□□□ -0.17
SPARC-204ENST00000521569 ABCC1P33527 1531 aa13.97□□□□□ -0.17
SPARC-204ENST00000521569 KIAA1107Q9UPP5 1409 aa13.97□□□□□ -0.17
SPARC-204ENST00000521569 PREX1Q8TCU6 1659 aa13.96□□□□□ -0.17
SPARC-204ENST00000521569 FYCO1Q9BQS8 1478 aa13.95□□□□□ -0.18
SPARC-204ENST00000521569 PLPPR3Q6T4P5 718 aa13.95□□□□□ -0.18
SPARC-204ENST00000521569 PPP6R1Q9UPN7 881 aa13.95□□□□□ -0.18
SPARC-204ENST00000521569 NPATQ14207 1427 aa13.95□□□□□ -0.18
SPARC-204ENST00000521569 PREX2Q70Z35 1606 aa13.93□□□□□ -0.18
SPARC-204ENST00000521569 CDC42BPBQ9Y5S2 1711 aa13.93□□□□□ -0.18
SPARC-204ENST00000521569 ESF1Q9H501 851 aaKnown RBP13.93□□□□□ -0.18
SPARC-204ENST00000521569 GPATCH8Q9UKJ3 1502 aaKnown RBP13.92□□□□□ -0.18
SPARC-204ENST00000521569 ABCA6Q8N139 1617 aa13.92□□□□□ -0.18
SPARC-204ENST00000521569 EHMT2Q96KQ7 1210 aa13.91□□□□□ -0.18
SPARC-204ENST00000521569 MYT1LQ9UL68 1186 aa13.91□□□□□ -0.18
SPARC-204ENST00000521569 PLEKHH2Q8IVE3 1493 aa13.91□□□□□ -0.18
SPARC-204ENST00000521569 IQSEC2Q5JU85 1478 aa13.9□□□□□ -0.18
SPARC-204ENST00000521569 STRCQ7RTU9 1775 aa13.9□□□□□ -0.18
SPARC-204ENST00000521569 LRRIQ1Q96JM4 1722 aa13.9□□□□□ -0.18
SPARC-204ENST00000521569 NCOA1Q15788 1441 aa13.9□□□□□ -0.19
SPARC-204ENST00000521569 SPAG9O60271 1321 aaKnown RBP13.9□□□□□ -0.19
SPARC-204ENST00000521569 SAMD9LQ8IVG5 1584 aa13.89□□□□□ -0.19
SPARC-204ENST00000521569 ZMYM3Q14202 1370 aa13.89□□□□□ -0.19
SPARC-204ENST00000521569 KIDINS220Q9ULH0 1771 aa13.88□□□□□ -0.19
SPARC-204ENST00000521569 ITSN2Q9NZM3 1697 aa13.87□□□□□ -0.19
SPARC-204ENST00000521569 CFDP1Q9UEE9 299 aaPredicted RBP13.86□□□□□ -0.19
SPARC-204ENST00000521569 C3P01024 1663 aa13.85□□□□□ -0.19
SPARC-204ENST00000521569 HNRNPMP52272 730 aaKnown RBP eCLIP13.85□□□□□ -0.19
SPARC-204ENST00000521569 PKD2Q13563 968 aa13.85□□□□□ -0.19
SPARC-204ENST00000521569 PLXNC1O60486 1568 aa13.84□□□□□ -0.19
SPARC-204ENST00000521569 LTBP4Q8N2S1 1624 aa13.84□□□□□ -0.19
SPARC-204ENST00000521569 CDC42BPAQ5VT25 1732 aa13.84□□□□□ -0.19
SPARC-204ENST00000521569 CCNB3Q8WWL7 1395 aa13.83□□□□□ -0.19
SPARC-204ENST00000521569 RTEL1-TNFRSF6BF6WH68 1400 aa13.83□□□□□ -0.2
SPARC-204ENST00000521569 PLA2R1Q13018 1463 aa13.83□□□□□ -0.2
SPARC-204ENST00000521569 SYCP2Q9BX26 1530 aa13.83□□□□□ -0.2
SPARC-204ENST00000521569 MROH2AA6NES4 1674 aa13.82□□□□□ -0.2
SPARC-204ENST00000521569 A2MP01023 1474 aa13.82□□□□□ -0.2
SPARC-204ENST00000521569 MBD5Q9P267 1494 aa13.82□□□□□ -0.2
SPARC-204ENST00000521569 ZNF777Q9ULD5 760 aaPredicted RBP13.82□□□□□ -0.2
SPARC-204ENST00000521569 PTPRKQ15262 1439 aa13.81□□□□□ -0.2
SPARC-204ENST00000521569 ATP7AQ04656 1500 aa13.81□□□□□ -0.2
SPARC-204ENST00000521569 RSPH4AQ5TD94 716 aa13.81□□□□□ -0.2
SPARC-204ENST00000521569 MTUS2Q5JR59 1369 aa13.8□□□□□ -0.2
SPARC-204ENST00000521569 CEP162Q5TB80 1403 aa13.8□□□□□ -0.2
SPARC-204ENST00000521569 TCOF1Q13428 1488 aaKnown RBP13.8□□□□□ -0.2
SPARC-204ENST00000521569 INO80Q9ULG1 1556 aaPredicted RBP13.79□□□□□ -0.2
SPARC-204ENST00000521569 DHX29Q7Z478 1369 aaKnown RBP13.79□□□□□ -0.2
SPARC-204ENST00000521569 CAMSAP1Q5T5Y3 1602 aa13.77□□□□□ -0.21
SPARC-204ENST00000521569 FAM135AQ9P2D6 1515 aa13.76□□□□□ -0.21
SPARC-204ENST00000521569 SOCS7O14512 581 aa13.75□□□□□ -0.21
SPARC-204ENST00000521569 GGT6Q6P531 493 aa13.75□□□□□ -0.21
SPARC-204ENST00000521569 DISP3Q9P2K9 1392 aa13.74□□□□□ -0.21
SPARC-204ENST00000521569 ZNF644Q9H582 1327 aaPredicted RBP13.74□□□□□ -0.21
SPARC-204ENST00000521569 NCKAP5LQ9HCH0 1330 aa13.74□□□□□ -0.21
SPARC-204ENST00000521569 EHBP1L1Q8N3D4 1523 aa13.73□□□□□ -0.21
SPARC-204ENST00000521569 A2ML1A8K2U0 1454 aa13.73□□□□□ -0.21
SPARC-204ENST00000521569 ZNF142P52746 1687 aaPredicted RBP13.72□□□□□ -0.21
SPARC-204ENST00000521569 ILDR2Q71H61 639 aa13.72□□□□□ -0.21
SPARC-204ENST00000521569 TIAM1Q13009 1591 aa13.71□□□□□ -0.21
SPARC-204ENST00000521569 CEP170BQ9Y4F5 1589 aaPredicted RBP13.71□□□□□ -0.21
SPARC-204ENST00000521569 ZNF335Q9H4Z2 1342 aaPredicted RBP13.71□□□□□ -0.21
SPARC-204ENST00000521569 ADGBQ8N7X0 1667 aa13.7□□□□□ -0.22
SPARC-204ENST00000521569 PZPP20742 1482 aa13.69□□□□□ -0.22
SPARC-204ENST00000521569 MYO3AQ8NEV4 1616 aa13.68□□□□□ -0.22
SPARC-204ENST00000521569 CCDC141Q6ZP82 1450 aa13.68□□□□□ -0.22
SPARC-204ENST00000521569 SUPT6HQ7KZ85 1726 aaKnown RBP13.68□□□□□ -0.22
SPARC-204ENST00000521569 TNRQ92752 1358 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms