RNA–Protein interactions for RNA: ENST00000521233.1

HDAC2-211, Transcript of histone deacetylase 2, humanhuman

TSL 2

Gene HDAC2, Length 733 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-211ENST00000521233 ARHGAP5Q13017 1502 aa19.6■□□□□ 0.73
HDAC2-211ENST00000521233 ITSN2Q9NZM3 1697 aa19.59■□□□□ 0.73
HDAC2-211ENST00000521233 CCNB3Q8WWL7 1395 aa19.58■□□□□ 0.73
HDAC2-211ENST00000521233 CDC42BPAQ5VT25 1732 aa19.58■□□□□ 0.72
HDAC2-211ENST00000521233 NCOA2Q15596 1464 aa19.58■□□□□ 0.72
HDAC2-211ENST00000521233 EFCAB2Q5VUJ9 269 aa19.55■□□□□ 0.72
HDAC2-211ENST00000521233 AKNAQ7Z591 1439 aa19.55■□□□□ 0.72
HDAC2-211ENST00000521233 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
HDAC2-211ENST00000521233 GPATCH8Q9UKJ3 1502 aaKnown RBP19.54■□□□□ 0.72
HDAC2-211ENST00000521233 ADGRL1O94910 1474 aa19.53■□□□□ 0.72
HDAC2-211ENST00000521233 COL17A1Q9UMD9 1497 aaPredicted RBP19.5■□□□□ 0.71
HDAC2-211ENST00000521233 KANK4Q5T7N3 995 aaPredicted RBP19.5■□□□□ 0.71
HDAC2-211ENST00000521233 DENND4BO75064 1496 aaPredicted RBP19.49■□□□□ 0.71
HDAC2-211ENST00000521233 PLEKHH2Q8IVE3 1493 aa19.49■□□□□ 0.71
HDAC2-211ENST00000521233 ABCC1P33527 1531 aa19.49■□□□□ 0.71
HDAC2-211ENST00000521233 CFDP1Q9UEE9 299 aaPredicted RBP19.47■□□□□ 0.71
HDAC2-211ENST00000521233 FRMPD1Q5SYB0 1578 aa19.46■□□□□ 0.71
HDAC2-211ENST00000521233 SAMD9LQ8IVG5 1584 aa19.46■□□□□ 0.71
HDAC2-211ENST00000521233 POGZQ7Z3K3 1410 aa19.46■□□□□ 0.71
HDAC2-211ENST00000521233 SCAPERQ9BY12 1400 aa19.46■□□□□ 0.71
HDAC2-211ENST00000521233 RICTORQ6R327 1708 aa19.45■□□□□ 0.7
HDAC2-211ENST00000521233 MYOM3Q5VTT5 1437 aa19.45■□□□□ 0.7
HDAC2-211ENST00000521233 ZNF518AQ6AHZ1 1483 aa19.44■□□□□ 0.7
HDAC2-211ENST00000521233 ZMYM4Q5VZL5 1548 aa19.44■□□□□ 0.7
HDAC2-211ENST00000521233 MIA2Q96PC5 1412 aa19.42■□□□□ 0.7
HDAC2-211ENST00000521233 KIAA1107Q9UPP5 1409 aa19.42■□□□□ 0.7
HDAC2-211ENST00000521233 SYCP2Q9BX26 1530 aa19.41■□□□□ 0.7
HDAC2-211ENST00000521233 ZNF777Q9ULD5 760 aaPredicted RBP19.4■□□□□ 0.7
HDAC2-211ENST00000521233 CAMSAP2Q08AD1 1489 aa19.4■□□□□ 0.7
HDAC2-211ENST00000521233 KDM5CP41229 1560 aa19.4■□□□□ 0.7
HDAC2-211ENST00000521233 RAPGEF3O95398 923 aa19.38■□□□□ 0.69
HDAC2-211ENST00000521233 MAGI2Q86UL8 1455 aa19.38■□□□□ 0.69
HDAC2-211ENST00000521233 ARHGEF40Q8TER5 1519 aa19.38■□□□□ 0.69
HDAC2-211ENST00000521233 ARHGEF12Q9NZN5 1544 aa19.36■□□□□ 0.69
HDAC2-211ENST00000521233 HECW2Q9P2P5 1572 aa19.36■□□□□ 0.69
HDAC2-211ENST00000521233 FGD6Q6ZV73 1430 aa19.35■□□□□ 0.69
HDAC2-211ENST00000521233 ZFYVE16Q7Z3T8 1539 aa19.35■□□□□ 0.69
HDAC2-211ENST00000521233 TRAPPC8Q9Y2L5 1435 aa19.34■□□□□ 0.69
HDAC2-211ENST00000521233 ARHGEF5Q12774 1597 aa19.33■□□□□ 0.69
HDAC2-211ENST00000521233 PTPN23Q9H3S7 1636 aa19.33■□□□□ 0.68
HDAC2-211ENST00000521233 CCDC141Q6ZP82 1450 aa19.32■□□□□ 0.68
HDAC2-211ENST00000521233 TCOF1Q13428 1488 aaKnown RBP19.31■□□□□ 0.68
HDAC2-211ENST00000521233 MBD5Q9P267 1494 aa19.31■□□□□ 0.68
HDAC2-211ENST00000521233 MLH3Q9UHC1 1453 aa19.31■□□□□ 0.68
HDAC2-211ENST00000521233 ZNF644Q9H582 1327 aaPredicted RBP19.3■□□□□ 0.68
HDAC2-211ENST00000521233 INO80Q9ULG1 1556 aaPredicted RBP19.29■□□□□ 0.68
HDAC2-211ENST00000521233 RSPH4AQ5TD94 716 aa19.29■□□□□ 0.68
HDAC2-211ENST00000521233 HNRNPMP52272 730 aaKnown RBP eCLIP19.28■□□□□ 0.68
HDAC2-211ENST00000521233 AFAP1Q8N556 730 aa19.28■□□□□ 0.68
HDAC2-211ENST00000521233 ATP7AQ04656 1500 aa19.27■□□□□ 0.68
HDAC2-211ENST00000521233 SPAG9O60271 1321 aaKnown RBP19.25■□□□□ 0.67
HDAC2-211ENST00000521233 YEATS2Q9ULM3 1422 aa19.25■□□□□ 0.67
HDAC2-211ENST00000521233 DIP2CQ9Y2E4 1556 aa19.25■□□□□ 0.67
HDAC2-211ENST00000521233 ABCA6Q8N139 1617 aa19.25■□□□□ 0.67
HDAC2-211ENST00000521233 KIDINS220Q9ULH0 1771 aa19.24■□□□□ 0.67
HDAC2-211ENST00000521233 FOXD1Q16676 465 aa19.24■□□□□ 0.67
HDAC2-211ENST00000521233 MYT1LQ9UL68 1186 aa19.24■□□□□ 0.67
HDAC2-211ENST00000521233 RTEL1-TNFRSF6BF6WH68 1400 aa19.24■□□□□ 0.67
HDAC2-211ENST00000521233 C9orf84Q5VXU9 1444 aa19.24■□□□□ 0.67
HDAC2-211ENST00000521233 REREQ9P2R6 1566 aa19.23■□□□□ 0.67
HDAC2-211ENST00000521233 ATP10AO60312 1499 aa19.23■□□□□ 0.67
HDAC2-211ENST00000521233 SHANK2Q9UPX8 1470 aa19.23■□□□□ 0.67
HDAC2-211ENST00000521233 DNMT1P26358 1616 aaKnown RBP19.23■□□□□ 0.67
HDAC2-211ENST00000521233 CROCC2H7BZ55 1655 aa19.23■□□□□ 0.67
HDAC2-211ENST00000521233 MAST1Q9Y2H9 1570 aa19.23■□□□□ 0.67
HDAC2-211ENST00000521233 POTEDQ86YR6 584 aa19.22■□□□□ 0.67
HDAC2-211ENST00000521233 PPARGC1BQ86YN6 1023 aaKnown RBP19.21■□□□□ 0.67
HDAC2-211ENST00000521233 TSPY4P0CV99 314 aa19.19■□□□□ 0.66
HDAC2-211ENST00000521233 TSPY10P0CW01 314 aa19.19■□□□□ 0.66
HDAC2-211ENST00000521233 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.19■□□□□ 0.66
HDAC2-211ENST00000521233 DAPK1P53355 1430 aa19.18■□□□□ 0.66
HDAC2-211ENST00000521233 ADGBQ8N7X0 1667 aa19.18■□□□□ 0.66
HDAC2-211ENST00000521233 FAM50AQ14320 339 aaKnown RBP19.17■□□□□ 0.66
HDAC2-211ENST00000521233 PLXNC1O60486 1568 aa19.17■□□□□ 0.66
HDAC2-211ENST00000521233 RRBP1Q9P2E9 1410 aaKnown RBP19.17■□□□□ 0.66
HDAC2-211ENST00000521233 ABCC5O15440 1437 aa19.16■□□□□ 0.66
HDAC2-211ENST00000521233 AGLP35573 1532 aa19.15■□□□□ 0.66
HDAC2-211ENST00000521233 A2MP01023 1474 aa19.13■□□□□ 0.65
HDAC2-211ENST00000521233 ARID4BQ4LE39 1312 aaPredicted RBP19.12■□□□□ 0.65
HDAC2-211ENST00000521233 BCORL1Q5H9F3 1711 aa19.11■□□□□ 0.65
HDAC2-211ENST00000521233 SIGLEC1Q9BZZ2 1709 aa19.11■□□□□ 0.65
HDAC2-211ENST00000521233 ADGRL2O95490 1459 aa19.09■□□□□ 0.65
HDAC2-211ENST00000521233 ANKRD30AQ9BXX3 1397 aa19.08■□□□□ 0.65
HDAC2-211ENST00000521233 DHX29Q7Z478 1369 aaKnown RBP19.07■□□□□ 0.64
HDAC2-211ENST00000521233 DUOX2Q9NRD8 1548 aa19.07■□□□□ 0.64
HDAC2-211ENST00000521233 ADAMTSL3P82987 1691 aa19.06■□□□□ 0.64
HDAC2-211ENST00000521233 EIF2AK4Q9P2K8 1649 aaKnown RBP19.06■□□□□ 0.64
HDAC2-211ENST00000521233 KIF15Q9NS87 1388 aa19.06■□□□□ 0.64
HDAC2-211ENST00000521233 ERBINQ96RT1 1412 aa19.03■□□□□ 0.64
HDAC2-211ENST00000521233 ROCK1Q13464 1354 aa19.03■□□□□ 0.64
HDAC2-211ENST00000521233 NCOA1Q15788 1441 aa19.02■□□□□ 0.64
HDAC2-211ENST00000521233 MADDQ8WXG6 1647 aa19.02■□□□□ 0.64
HDAC2-211ENST00000521233 FER1L4A9Z1Z3 1794 aa19.01■□□□□ 0.63
HDAC2-211ENST00000521233 FAM135AQ9P2D6 1515 aa19.01■□□□□ 0.63
HDAC2-211ENST00000521233 PTPRKQ15262 1439 aa19■□□□□ 0.63
HDAC2-211ENST00000521233 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
HDAC2-211ENST00000521233 RNF17Q9BXT8 1623 aaKnown RBP18.99■□□□□ 0.63
HDAC2-211ENST00000521233 KDM4FA0A1W2PPD8 638 aa18.98■□□□□ 0.63
HDAC2-211ENST00000521233 MLECQ14165 292 aa18.97■□□□□ 0.63
HDAC2-211ENST00000521233 RIMS1Q86UR5 1692 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms