RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 ARHGAP5Q13017 1502 aa27.4■■□□□ 1.98
SQLE-205ENST00000521232 POGZQ7Z3K3 1410 aa27.4■■□□□ 1.98
SQLE-205ENST00000521232 MAGI2Q86UL8 1455 aa27.39■■□□□ 1.98
SQLE-205ENST00000521232 ARHGEF40Q8TER5 1519 aa27.38■■□□□ 1.97
SQLE-205ENST00000521232 CDC42BPBQ9Y5S2 1711 aa27.38■■□□□ 1.97
SQLE-205ENST00000521232 ZFYVE16Q7Z3T8 1539 aa27.34■■□□□ 1.97
SQLE-205ENST00000521232 ARID4BQ4LE39 1312 aaPredicted RBP27.34■■□□□ 1.97
SQLE-205ENST00000521232 YEATS2Q9ULM3 1422 aa27.33■■□□□ 1.97
SQLE-205ENST00000521232 PREX2Q70Z35 1606 aa27.33■■□□□ 1.97
SQLE-205ENST00000521232 ADAMTSL3P82987 1691 aa27.33■■□□□ 1.97
SQLE-205ENST00000521232 BCORL1Q5H9F3 1711 aa27.3■■□□□ 1.96
SQLE-205ENST00000521232 CDC42BPAQ5VT25 1732 aa27.3■■□□□ 1.96
SQLE-205ENST00000521232 AFAP1Q8N556 730 aa27.29■■□□□ 1.96
SQLE-205ENST00000521232 ZNF518AQ6AHZ1 1483 aa27.29■■□□□ 1.96
SQLE-205ENST00000521232 MTUS2Q5JR59 1369 aa27.26■■□□□ 1.95
SQLE-205ENST00000521232 GPATCH8Q9UKJ3 1502 aaKnown RBP27.26■■□□□ 1.95
SQLE-205ENST00000521232 KDM5CP41229 1560 aa27.25■■□□□ 1.95
SQLE-205ENST00000521232 ATP10AO60312 1499 aa27.24■■□□□ 1.95
SQLE-205ENST00000521232 ABCC1P33527 1531 aa27.23■■□□□ 1.95
SQLE-205ENST00000521232 ARHGEF12Q9NZN5 1544 aa27.23■■□□□ 1.95
SQLE-205ENST00000521232 PTPRMP28827 1452 aa27.22■■□□□ 1.95
SQLE-205ENST00000521232 SIGLEC1Q9BZZ2 1709 aa27.21■■□□□ 1.95
SQLE-205ENST00000521232 TRAPPC8Q9Y2L5 1435 aa27.2■■□□□ 1.94
SQLE-205ENST00000521232 CCNB3Q8WWL7 1395 aa27.19■■□□□ 1.94
SQLE-205ENST00000521232 MADDQ8WXG6 1647 aa27.19■■□□□ 1.94
SQLE-205ENST00000521232 MLH3Q9UHC1 1453 aa27.19■■□□□ 1.94
SQLE-205ENST00000521232 ZNF777Q9ULD5 760 aaPredicted RBP27.18■■□□□ 1.94
SQLE-205ENST00000521232 ITSN2Q9NZM3 1697 aa27.17■■□□□ 1.94
SQLE-205ENST00000521232 C9orf84Q5VXU9 1444 aa27.17■■□□□ 1.94
SQLE-205ENST00000521232 CFDP1Q9UEE9 299 aaPredicted RBP27.17■■□□□ 1.94
SQLE-205ENST00000521232 EHBP1L1Q8N3D4 1523 aa27.16■■□□□ 1.94
SQLE-205ENST00000521232 HECW2Q9P2P5 1572 aa27.16■■□□□ 1.94
SQLE-205ENST00000521232 SAMD9LQ8IVG5 1584 aa27.15■■□□□ 1.94
SQLE-205ENST00000521232 MYT1LQ9UL68 1186 aa27.15■■□□□ 1.94
SQLE-205ENST00000521232 VPS8Q8N3P4 1428 aa27.15■■□□□ 1.94
SQLE-205ENST00000521232 KIAA1107Q9UPP5 1409 aa27.11■■□□□ 1.93
SQLE-205ENST00000521232 HNRNPMP52272 730 aaKnown RBP eCLIP27.11■■□□□ 1.93
SQLE-205ENST00000521232 MLECQ14165 292 aa27.11■■□□□ 1.93
SQLE-205ENST00000521232 DIP2CQ9Y2E4 1556 aa27.1■■□□□ 1.93
SQLE-205ENST00000521232 RIMS1Q86UR5 1692 aaKnown RBP27.09■■□□□ 1.93
SQLE-205ENST00000521232 PLEKHH2Q8IVE3 1493 aa27.09■■□□□ 1.93
SQLE-205ENST00000521232 TIAM1Q13009 1591 aa27.09■■□□□ 1.93
SQLE-205ENST00000521232 SYCP2Q9BX26 1530 aa27.08■■□□□ 1.93
SQLE-205ENST00000521232 REREQ9P2R6 1566 aa27.08■■□□□ 1.93
SQLE-205ENST00000521232 ABCA6Q8N139 1617 aa27.07■■□□□ 1.92
SQLE-205ENST00000521232 KIDINS220Q9ULH0 1771 aa27.07■■□□□ 1.92
SQLE-205ENST00000521232 SPAG9O60271 1321 aaKnown RBP27.03■■□□□ 1.92
SQLE-205ENST00000521232 FER1L4A9Z1Z3 1794 aa27.02■■□□□ 1.92
SQLE-205ENST00000521232 SUPT6HQ7KZ85 1726 aaKnown RBP27.02■■□□□ 1.92
SQLE-205ENST00000521232 NCOA2Q15596 1464 aa27.02■■□□□ 1.92
SQLE-205ENST00000521232 ZNF644Q9H582 1327 aaPredicted RBP27.02■■□□□ 1.92
SQLE-205ENST00000521232 AGLP35573 1532 aa27■■□□□ 1.91
SQLE-205ENST00000521232 MAP3K1Q13233 1512 aa27■■□□□ 1.91
SQLE-205ENST00000521232 LRRC9Q6ZRR7 1453 aa27■■□□□ 1.91
SQLE-205ENST00000521232 MBD5Q9P267 1494 aa26.96■■□□□ 1.91
SQLE-205ENST00000521232 KANK4Q5T7N3 995 aaPredicted RBP26.94■■□□□ 1.9
SQLE-205ENST00000521232 PLPPR3Q6T4P5 718 aa26.94■■□□□ 1.9
SQLE-205ENST00000521232 ATP7AQ04656 1500 aa26.93■■□□□ 1.9
SQLE-205ENST00000521232 INO80Q9ULG1 1556 aaPredicted RBP26.92■■□□□ 1.9
SQLE-205ENST00000521232 LMTK3Q96Q04 1460 aa26.9■■□□□ 1.9
SQLE-205ENST00000521232 RSPH4AQ5TD94 716 aa26.89■■□□□ 1.9
SQLE-205ENST00000521232 CEBPAP49715 358 aaPredicted RBP26.87■■□□□ 1.89
SQLE-205ENST00000521232 RTEL1-TNFRSF6BF6WH68 1400 aa26.87■■□□□ 1.89
SQLE-205ENST00000521232 CAMSAP2Q08AD1 1489 aa26.87■■□□□ 1.89
SQLE-205ENST00000521232 A2MP01023 1474 aa26.86■■□□□ 1.89
SQLE-205ENST00000521232 ESF1Q9H501 851 aaKnown RBP26.84■■□□□ 1.89
SQLE-205ENST00000521232 APLP2Q06481 763 aa26.83■■□□□ 1.89
SQLE-205ENST00000521232 PLXNC1O60486 1568 aa26.83■■□□□ 1.89
SQLE-205ENST00000521232 CCDC141Q6ZP82 1450 aa26.82■■□□□ 1.88
SQLE-205ENST00000521232 SETD1BQ9UPS6 1966 aaKnown RBP26.82■■□□□ 1.88
SQLE-205ENST00000521232 ADGBQ8N7X0 1667 aa26.81■■□□□ 1.88
SQLE-205ENST00000521232 CNTLNQ9NXG0 1405 aa26.8■■□□□ 1.88
SQLE-205ENST00000521232 MIA2Q96PC5 1412 aa26.78■■□□□ 1.88
SQLE-205ENST00000521232 ARHGEF5Q12774 1597 aa26.78■■□□□ 1.88
SQLE-205ENST00000521232 MYOM3Q5VTT5 1437 aa26.77■■□□□ 1.88
SQLE-205ENST00000521232 HSPA2P54652 639 aa26.77■■□□□ 1.88
SQLE-205ENST00000521232 C3P01024 1663 aa26.76■■□□□ 1.87
SQLE-205ENST00000521232 DHX29Q7Z478 1369 aaKnown RBP26.76■■□□□ 1.87
SQLE-205ENST00000521232 TSPY4P0CV99 314 aa26.75■■□□□ 1.87
SQLE-205ENST00000521232 TSPY10P0CW01 314 aa26.75■■□□□ 1.87
SQLE-205ENST00000521232 PREX1Q8TCU6 1659 aa26.74■■□□□ 1.87
SQLE-205ENST00000521232 GGT6Q6P531 493 aa26.73■■□□□ 1.87
SQLE-205ENST00000521232 PPP6R1Q9UPN7 881 aa26.73■■□□□ 1.87
SQLE-205ENST00000521232 ZMYM3Q14202 1370 aa26.71■■□□□ 1.87
SQLE-205ENST00000521232 MROH2AA6NES4 1674 aa26.7■■□□□ 1.87
SQLE-205ENST00000521232 UHRF1BP1Q6BDS2 1440 aa26.67■■□□□ 1.86
SQLE-205ENST00000521232 CLTCQ00610 1675 aaKnown RBP26.65■■□□□ 1.86
SQLE-205ENST00000521232 MAST1Q9Y2H9 1570 aa26.64■■□□□ 1.86
SQLE-205ENST00000521232 KIF3BO15066 747 aa26.64■■□□□ 1.86
SQLE-205ENST00000521232 NPATQ14207 1427 aa26.63■■□□□ 1.85
SQLE-205ENST00000521232 PTPN23Q9H3S7 1636 aa26.58■■□□□ 1.85
SQLE-205ENST00000521232 FGD6Q6ZV73 1430 aa26.56■■□□□ 1.84
SQLE-205ENST00000521232 PTPRKQ15262 1439 aa26.56■■□□□ 1.84
SQLE-205ENST00000521232 ILDR1Q86SU0 546 aaPredicted RBP26.55■■□□□ 1.84
SQLE-205ENST00000521232 ABCC5O15440 1437 aa26.55■■□□□ 1.84
SQLE-205ENST00000521232 TCOF1Q13428 1488 aaKnown RBP26.55■■□□□ 1.84
SQLE-205ENST00000521232 FAM135AQ9P2D6 1515 aa26.53■■□□□ 1.84
SQLE-205ENST00000521232 STRCQ7RTU9 1775 aa26.53■■□□□ 1.84
SQLE-205ENST00000521232 WASHC2CQ9Y4E1 1318 aa26.51■■□□□ 1.83
SQLE-205ENST00000521232 DMRT2Q9Y5R5 561 aa26.51■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms