RNA–Protein interactions for RNA: ENST00000520008.5

POLB-208, Transcript of DNA polymerase beta, humanhuman

TSL 2

Gene POLB, Length 725 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-208ENST00000520008 RIMS1Q86UR5 1692 aaKnown RBP19.56■□□□□ 0.72
POLB-208ENST00000520008 PCF11O94913 1555 aaKnown RBP19.53■□□□□ 0.72
POLB-208ENST00000520008 SCAPERQ9BY12 1400 aa19.53■□□□□ 0.72
POLB-208ENST00000520008 EHMT2Q96KQ7 1210 aa19.53■□□□□ 0.72
POLB-208ENST00000520008 LMTK3Q96Q04 1460 aa19.53■□□□□ 0.72
POLB-208ENST00000520008 TROQ12816 1431 aaPredicted RBP19.52■□□□□ 0.72
POLB-208ENST00000520008 ARID4BQ4LE39 1312 aaPredicted RBP19.51■□□□□ 0.71
POLB-208ENST00000520008 PHF23Q9BUL5 403 aaPredicted RBP19.51■□□□□ 0.71
POLB-208ENST00000520008 KDM5CP41229 1560 aa19.49■□□□□ 0.71
POLB-208ENST00000520008 CDK11AQ9UQ88 783 aaPredicted RBP19.48■□□□□ 0.71
POLB-208ENST00000520008 CDC42BPBQ9Y5S2 1711 aa19.46■□□□□ 0.71
POLB-208ENST00000520008 FER1L4A9Z1Z3 1794 aa19.46■□□□□ 0.71
POLB-208ENST00000520008 CLIP1P30622 1438 aa19.45■□□□□ 0.7
POLB-208ENST00000520008 CASKIN1Q8WXD9 1431 aa19.45■□□□□ 0.7
POLB-208ENST00000520008 EFCAB2Q5VUJ9 269 aa19.45■□□□□ 0.7
POLB-208ENST00000520008 ATP1B4Q9UN42 357 aaPredicted RBP19.45■□□□□ 0.7
POLB-208ENST00000520008 ZNF518AQ6AHZ1 1483 aa19.45■□□□□ 0.7
POLB-208ENST00000520008 ARHGAP5Q13017 1502 aa19.45■□□□□ 0.7
POLB-208ENST00000520008 ARHGEF12Q9NZN5 1544 aa19.45■□□□□ 0.7
POLB-208ENST00000520008 PREX2Q70Z35 1606 aa19.44■□□□□ 0.7
POLB-208ENST00000520008 C9orf84Q5VXU9 1444 aa19.44■□□□□ 0.7
POLB-208ENST00000520008 ATP10AO60312 1499 aa19.44■□□□□ 0.7
POLB-208ENST00000520008 CCDC18Q5T9S5 1454 aa19.44■□□□□ 0.7
POLB-208ENST00000520008 ABCC1P33527 1531 aa19.4■□□□□ 0.7
POLB-208ENST00000520008 REREQ9P2R6 1566 aa19.4■□□□□ 0.7
POLB-208ENST00000520008 DIP2CQ9Y2E4 1556 aa19.4■□□□□ 0.7
POLB-208ENST00000520008 FYCO1Q9BQS8 1478 aa19.39■□□□□ 0.69
POLB-208ENST00000520008 CDC42BPAQ5VT25 1732 aa19.37■□□□□ 0.69
POLB-208ENST00000520008 ITSN2Q9NZM3 1697 aa19.37■□□□□ 0.69
POLB-208ENST00000520008 ABCA6Q8N139 1617 aa19.37■□□□□ 0.69
POLB-208ENST00000520008 MLH3Q9UHC1 1453 aa19.36■□□□□ 0.69
POLB-208ENST00000520008 AFAP1Q8N556 730 aa19.35■□□□□ 0.69
POLB-208ENST00000520008 MLECQ14165 292 aa19.33■□□□□ 0.68
POLB-208ENST00000520008 PREX1Q8TCU6 1659 aa19.33■□□□□ 0.68
POLB-208ENST00000520008 TRAPPC8Q9Y2L5 1435 aa19.32■□□□□ 0.68
POLB-208ENST00000520008 AGLP35573 1532 aa19.3■□□□□ 0.68
POLB-208ENST00000520008 KIDINS220Q9ULH0 1771 aa19.3■□□□□ 0.68
POLB-208ENST00000520008 SAMD9LQ8IVG5 1584 aa19.29■□□□□ 0.68
POLB-208ENST00000520008 HSPA2P54652 639 aa19.29■□□□□ 0.68
POLB-208ENST00000520008 FBXO41Q8TF61 875 aa19.29■□□□□ 0.68
POLB-208ENST00000520008 GPATCH8Q9UKJ3 1502 aaKnown RBP19.25■□□□□ 0.67
POLB-208ENST00000520008 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
POLB-208ENST00000520008 C3P01024 1663 aa19.24■□□□□ 0.67
POLB-208ENST00000520008 SYCP2Q9BX26 1530 aa19.24■□□□□ 0.67
POLB-208ENST00000520008 CEBPAP49715 358 aaPredicted RBP19.21■□□□□ 0.67
POLB-208ENST00000520008 INO80Q9ULG1 1556 aaPredicted RBP19.19■□□□□ 0.66
POLB-208ENST00000520008 STRCQ7RTU9 1775 aa19.19■□□□□ 0.66
POLB-208ENST00000520008 KIAA1107Q9UPP5 1409 aa19.18■□□□□ 0.66
POLB-208ENST00000520008 PLXNC1O60486 1568 aa19.18■□□□□ 0.66
POLB-208ENST00000520008 SETD1BQ9UPS6 1966 aaKnown RBP19.17■□□□□ 0.66
POLB-208ENST00000520008 MYT1LQ9UL68 1186 aa19.17■□□□□ 0.66
POLB-208ENST00000520008 UHRF1BP1Q6BDS2 1440 aa19.17■□□□□ 0.66
POLB-208ENST00000520008 ATP7AQ04656 1500 aa19.16■□□□□ 0.66
POLB-208ENST00000520008 MROH2AA6NES4 1674 aa19.16■□□□□ 0.66
POLB-208ENST00000520008 PLEKHH2Q8IVE3 1493 aa19.16■□□□□ 0.66
POLB-208ENST00000520008 TIAM1Q13009 1591 aa19.15■□□□□ 0.66
POLB-208ENST00000520008 CNTLNQ9NXG0 1405 aa19.15■□□□□ 0.66
POLB-208ENST00000520008 EHBP1L1Q8N3D4 1523 aa19.14■□□□□ 0.65
POLB-208ENST00000520008 CCNB3Q8WWL7 1395 aa19.12■□□□□ 0.65
POLB-208ENST00000520008 ZNF777Q9ULD5 760 aaPredicted RBP19.12■□□□□ 0.65
POLB-208ENST00000520008 SUPT6HQ7KZ85 1726 aaKnown RBP19.11■□□□□ 0.65
POLB-208ENST00000520008 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
POLB-208ENST00000520008 SPAG9O60271 1321 aaKnown RBP19.1■□□□□ 0.65
POLB-208ENST00000520008 HNRNPMP52272 730 aaKnown RBP eCLIP19.1■□□□□ 0.65
POLB-208ENST00000520008 CFDP1Q9UEE9 299 aaPredicted RBP19.1■□□□□ 0.65
POLB-208ENST00000520008 CEP162Q5TB80 1403 aa19.09■□□□□ 0.65
POLB-208ENST00000520008 MBD5Q9P267 1494 aa19.09■□□□□ 0.65
POLB-208ENST00000520008 CERKQ8TCT0 537 aa19.08■□□□□ 0.64
POLB-208ENST00000520008 A2MP01023 1474 aa19.08■□□□□ 0.64
POLB-208ENST00000520008 NPATQ14207 1427 aa19.08■□□□□ 0.64
POLB-208ENST00000520008 ADGBQ8N7X0 1667 aa19.08■□□□□ 0.64
POLB-208ENST00000520008 CLTCQ00610 1675 aaKnown RBP19.06■□□□□ 0.64
POLB-208ENST00000520008 ESF1Q9H501 851 aaKnown RBP19.05■□□□□ 0.64
POLB-208ENST00000520008 PTPRTO14522 1441 aa19.05■□□□□ 0.64
POLB-208ENST00000520008 NCOA1Q15788 1441 aa19.03■□□□□ 0.64
POLB-208ENST00000520008 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
POLB-208ENST00000520008 ZNF142P52746 1687 aaPredicted RBP19.03■□□□□ 0.64
POLB-208ENST00000520008 ZMYM3Q14202 1370 aa19.03■□□□□ 0.64
POLB-208ENST00000520008 ZNF644Q9H582 1327 aaPredicted RBP19.02■□□□□ 0.64
POLB-208ENST00000520008 RTEL1-TNFRSF6BF6WH68 1400 aa19.01■□□□□ 0.63
POLB-208ENST00000520008 MYO3AQ8NEV4 1616 aa19.01■□□□□ 0.63
POLB-208ENST00000520008 NCOA2Q15596 1464 aa19■□□□□ 0.63
POLB-208ENST00000520008 CAMSAP1Q5T5Y3 1602 aa18.99■□□□□ 0.63
POLB-208ENST00000520008 LTBP4Q8N2S1 1624 aa18.99■□□□□ 0.63
POLB-208ENST00000520008 PTPRKQ15262 1439 aa18.99■□□□□ 0.63
POLB-208ENST00000520008 CAMSAP2Q08AD1 1489 aa18.97■□□□□ 0.63
POLB-208ENST00000520008 CCDC141Q6ZP82 1450 aa18.97■□□□□ 0.63
POLB-208ENST00000520008 CEP170BQ9Y4F5 1589 aaPredicted RBP18.96■□□□□ 0.63
POLB-208ENST00000520008 PPP6R1Q9UPN7 881 aa18.94■□□□□ 0.62
POLB-208ENST00000520008 PLA2R1Q13018 1463 aa18.94■□□□□ 0.62
POLB-208ENST00000520008 DHX29Q7Z478 1369 aaKnown RBP18.93■□□□□ 0.62
POLB-208ENST00000520008 ARHGEF5Q12774 1597 aa18.93■□□□□ 0.62
POLB-208ENST00000520008 FAM135AQ9P2D6 1515 aa18.93■□□□□ 0.62
POLB-208ENST00000520008 VPS8Q8N3P4 1428 aa18.91■□□□□ 0.62
POLB-208ENST00000520008 TCOF1Q13428 1488 aaKnown RBP18.91■□□□□ 0.62
POLB-208ENST00000520008 IQSEC2Q5JU85 1478 aa18.91■□□□□ 0.62
POLB-208ENST00000520008 GGT6Q6P531 493 aa18.91■□□□□ 0.62
POLB-208ENST00000520008 LRRC9Q6ZRR7 1453 aa18.9■□□□□ 0.62
POLB-208ENST00000520008 KDM5DQ9BY66 1539 aa18.89■□□□□ 0.61
POLB-208ENST00000520008 DNMT1P26358 1616 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms