RNA–Protein interactions for RNA: ENST00000519835.5

CPEB4-207, Transcript of cytoplasmic polyadenylation element binding protein 4, humanhuman

TSL 1 (best) BASIC

Gene CPEB4, Length 2,257 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB4-207ENST00000519835 MPHOSPH9Q99550 1183 aa16.48■□□□□ 0.23
CPEB4-207ENST00000519835 PPP4R2Q9NY27 417 aa16.48■□□□□ 0.23
CPEB4-207ENST00000519835 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
CPEB4-207ENST00000519835 ZBED9Q6R2W3 1325 aa16.46■□□□□ 0.23
CPEB4-207ENST00000519835 DAPK1P53355 1430 aa16.46■□□□□ 0.23
CPEB4-207ENST00000519835 PRKRIP1Q9H875 184 aaPredicted RBP16.45■□□□□ 0.22
CPEB4-207ENST00000519835 L3MBTL2Q969R5 705 aa16.44■□□□□ 0.22
CPEB4-207ENST00000519835 ANKRD30BQ9BXX2 1392 aa16.44■□□□□ 0.22
CPEB4-207ENST00000519835 MSH5O43196 834 aa16.44■□□□□ 0.22
CPEB4-207ENST00000519835 BCL11AQ9H165 835 aa16.44■□□□□ 0.22
CPEB4-207ENST00000519835 ADGBQ8N7X0 1667 aa16.43■□□□□ 0.22
CPEB4-207ENST00000519835 IRX6P78412 446 aaPredicted RBP16.43■□□□□ 0.22
CPEB4-207ENST00000519835 ERICH6Q7L0X2 663 aa16.42■□□□□ 0.22
CPEB4-207ENST00000519835 SPATA31E1Q6ZUB1 1445 aa16.41■□□□□ 0.22
CPEB4-207ENST00000519835 MRS2Q9HD23 443 aa16.4■□□□□ 0.22
CPEB4-207ENST00000519835 ITSN2Q9NZM3 1697 aa16.4■□□□□ 0.22
CPEB4-207ENST00000519835 KIAA0556O60303 1618 aa16.39■□□□□ 0.21
CPEB4-207ENST00000519835 KIF14Q15058 1648 aa16.38■□□□□ 0.21
CPEB4-207ENST00000519835 ABCC5O15440 1437 aa16.38■□□□□ 0.21
CPEB4-207ENST00000519835 CCDC184Q52MB2 194 aa16.38■□□□□ 0.21
CPEB4-207ENST00000519835 RAPGEF6Q8TEU7 1601 aa16.38■□□□□ 0.21
CPEB4-207ENST00000519835 C11orf95C9JLR9 678 aaPredicted RBP16.36■□□□□ 0.21
CPEB4-207ENST00000519835 CROCC2H7BZ55 1655 aa16.36■□□□□ 0.21
CPEB4-207ENST00000519835 KIF7Q2M1P5 1343 aa16.36■□□□□ 0.21
CPEB4-207ENST00000519835 MBD5Q9P267 1494 aa16.36■□□□□ 0.21
CPEB4-207ENST00000519835 FAM9BQ8IZU0 186 aa16.36■□□□□ 0.21
CPEB4-207ENST00000519835 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
CPEB4-207ENST00000519835 NBPF8Q3BBV2 869 aa16.34■□□□□ 0.21
CPEB4-207ENST00000519835 SMG6Q86US8 1419 aaKnown RBP16.33■□□□□ 0.21
CPEB4-207ENST00000519835 PZPP20742 1482 aa16.33■□□□□ 0.2
CPEB4-207ENST00000519835 FOXD1Q16676 465 aa16.33■□□□□ 0.2
CPEB4-207ENST00000519835 ADCY10Q96PN6 1610 aa16.32■□□□□ 0.2
CPEB4-207ENST00000519835 NUP153P49790 1475 aaKnown RBP16.32■□□□□ 0.2
CPEB4-207ENST00000519835 KDM5CP41229 1560 aa16.31■□□□□ 0.2
CPEB4-207ENST00000519835 SLC4A1APQ9BWU0 796 aaKnown RBP16.3■□□□□ 0.2
CPEB4-207ENST00000519835 ADGRL2O95490 1459 aa16.3■□□□□ 0.2
CPEB4-207ENST00000519835 BCORL1Q5H9F3 1711 aa16.3■□□□□ 0.2
CPEB4-207ENST00000519835 CAMSAP2Q08AD1 1489 aa16.3■□□□□ 0.2
CPEB4-207ENST00000519835 DISP1Q96F81 1524 aa16.3■□□□□ 0.2
CPEB4-207ENST00000519835 KIAA0586Q9BVV6 1533 aa16.3■□□□□ 0.2
CPEB4-207ENST00000519835 ARID4BQ4LE39 1312 aaPredicted RBP16.29■□□□□ 0.2
CPEB4-207ENST00000519835 DHX29Q7Z478 1369 aaKnown RBP16.28■□□□□ 0.2
CPEB4-207ENST00000519835 MRC2Q9UBG0 1479 aa16.28■□□□□ 0.2
CPEB4-207ENST00000519835 KIAA1107Q9UPP5 1409 aa16.28■□□□□ 0.2
CPEB4-207ENST00000519835 B4GALNT3Q6L9W6 998 aa16.27■□□□□ 0.2
CPEB4-207ENST00000519835 TROQ12816 1431 aaPredicted RBP16.26■□□□□ 0.19
CPEB4-207ENST00000519835 USP47Q96K76 1375 aa16.26■□□□□ 0.19
CPEB4-207ENST00000519835 ROCK2O75116 1388 aaKnown RBP16.25■□□□□ 0.19
CPEB4-207ENST00000519835 NUDCQ9Y266 331 aa16.24■□□□□ 0.19
CPEB4-207ENST00000519835 ARHGEF12Q9NZN5 1544 aa16.24■□□□□ 0.19
CPEB4-207ENST00000519835 RALGAPBQ86X10 1494 aa16.23■□□□□ 0.19
CPEB4-207ENST00000519835 IFT140Q96RY7 1462 aa16.23■□□□□ 0.19
CPEB4-207ENST00000519835 RNF123Q5XPI4 1314 aa16.23■□□□□ 0.19
CPEB4-207ENST00000519835 UHRF1BP1Q6BDS2 1440 aa16.22■□□□□ 0.19
CPEB4-207ENST00000519835 ARID3CA6NKF2 412 aa16.21■□□□□ 0.19
CPEB4-207ENST00000519835 ZNF644Q9H582 1327 aaPredicted RBP16.21■□□□□ 0.19
CPEB4-207ENST00000519835 E9PCH4 1651 aa16.2■□□□□ 0.18
CPEB4-207ENST00000519835 PRKCSHP14314 528 aaPredicted RBP16.2■□□□□ 0.18
CPEB4-207ENST00000519835 GRIN2AQ12879 1464 aa16.2■□□□□ 0.18
CPEB4-207ENST00000519835 SHANK2Q9UPX8 1470 aa16.19■□□□□ 0.18
CPEB4-207ENST00000519835 KDM5DQ9BY66 1539 aa16.19■□□□□ 0.18
CPEB4-207ENST00000519835 GPATCH8Q9UKJ3 1502 aaKnown RBP16.19■□□□□ 0.18
CPEB4-207ENST00000519835 ANKRD30AQ9BXX3 1397 aa16.19■□□□□ 0.18
CPEB4-207ENST00000519835 CDC42BPAQ5VT25 1732 aa16.18■□□□□ 0.18
CPEB4-207ENST00000519835 KTN1Q86UP2 1357 aaKnown RBP16.17■□□□□ 0.18
CPEB4-207ENST00000519835 NOP58Q9Y2X3 529 aaKnown RBP16.17■□□□□ 0.18
CPEB4-207ENST00000519835 CFDP1Q9UEE9 299 aaPredicted RBP16.16■□□□□ 0.18
CPEB4-207ENST00000519835 PRG4Q92954 1404 aaPredicted RBP16.16■□□□□ 0.18
CPEB4-207ENST00000519835 EIF4G3O43432 1585 aaKnown RBP16.16■□□□□ 0.18
CPEB4-207ENST00000519835 KIF15Q9NS87 1388 aa16.15■□□□□ 0.18
CPEB4-207ENST00000519835 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
CPEB4-207ENST00000519835 ANKRD50Q9ULJ7 1429 aa16.15■□□□□ 0.18
CPEB4-207ENST00000519835 CEP170Q5SW79 1584 aa16.14■□□□□ 0.17
CPEB4-207ENST00000519835 CCDC136Q96JN2 1154 aa16.14■□□□□ 0.17
CPEB4-207ENST00000519835 PKD2Q13563 968 aa16.12■□□□□ 0.17
CPEB4-207ENST00000519835 BRD4O60885 1362 aaPredicted RBP16.12■□□□□ 0.17
CPEB4-207ENST00000519835 LRPPRCP42704 1394 aaKnown RBP16.12■□□□□ 0.17
CPEB4-207ENST00000519835 ANP32AP39687 249 aaKnown RBP16.11■□□□□ 0.17
CPEB4-207ENST00000519835 PNISRQ8TF01 805 aaKnown RBP16.11■□□□□ 0.17
CPEB4-207ENST00000519835 MAGI1Q96QZ7 1491 aaPredicted RBP16.1■□□□□ 0.17
CPEB4-207ENST00000519835 ZNF326Q5BKZ1 582 aaKnown RBP16.1■□□□□ 0.17
CPEB4-207ENST00000519835 POLR3GLQ9BT43 218 aa16.1■□□□□ 0.17
CPEB4-207ENST00000519835 TMC1Q8TDI8 760 aa16.09■□□□□ 0.17
CPEB4-207ENST00000519835 PLB1Q6P1J6 1458 aa16.09■□□□□ 0.17
CPEB4-207ENST00000519835 MYBBP1AQ9BQG0 1328 aaKnown RBP16.08■□□□□ 0.16
CPEB4-207ENST00000519835 C9orf84Q5VXU9 1444 aa16.08■□□□□ 0.16
CPEB4-207ENST00000519835 RALBP1Q15311 655 aa16.07■□□□□ 0.16
CPEB4-207ENST00000519835 ARHGEF5Q12774 1597 aa16.07■□□□□ 0.16
CPEB4-207ENST00000519835 CARD11Q9BXL7 1154 aa16.07■□□□□ 0.16
CPEB4-207ENST00000519835 PTPRGP23470 1445 aa16.06■□□□□ 0.16
CPEB4-207ENST00000519835 CARMIL2Q6F5E8 1435 aa16.06■□□□□ 0.16
CPEB4-207ENST00000519835 DEKP35659 375 aaKnown RBP16.06■□□□□ 0.16
CPEB4-207ENST00000519835 IPO9Q96P70 1041 aaKnown RBP16.06■□□□□ 0.16
CPEB4-207ENST00000519835 ABCC10Q5T3U5 1492 aa16.05■□□□□ 0.16
CPEB4-207ENST00000519835 TRPM1Q7Z4N2 1603 aa16.05■□□□□ 0.16
CPEB4-207ENST00000519835 NUP155O75694 1391 aa16.05■□□□□ 0.16
CPEB4-207ENST00000519835 ABCA8O94911 1581 aa16.04■□□□□ 0.16
CPEB4-207ENST00000519835 LAMC1P11047 1609 aa16.04■□□□□ 0.16
CPEB4-207ENST00000519835 ZNF777Q9ULD5 760 aaPredicted RBP16.04■□□□□ 0.16
CPEB4-207ENST00000519835 SYNJ2O15056 1496 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms