RNA–Protein interactions for RNA: ENST00000519771.5

POLB-207, Transcript of DNA polymerase beta, humanhuman

TSL 5

Gene POLB, Length 720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-207ENST00000519771 KDM2AQ9Y2K7 1162 aa14.05□□□□□ -0.16
POLB-207ENST00000519771 C3orf67Q6ZVT6 689 aa14.04□□□□□ -0.16
POLB-207ENST00000519771 TMC2Q8TDI7 906 aa14.03□□□□□ -0.16
POLB-207ENST00000519771 BICRAQ9NZM4 1560 aa14.02□□□□□ -0.16
POLB-207ENST00000519771 CADPS2Q86UW7 1296 aa14.02□□□□□ -0.17
POLB-207ENST00000519771 LARP6Q9BRS8 491 aaKnown RBP13.99□□□□□ -0.17
POLB-207ENST00000519771 POTEFA5A3E0 1075 aa13.97□□□□□ -0.17
POLB-207ENST00000519771 TMEM121BQ9BXQ6 578 aaPredicted RBP13.97□□□□□ -0.17
POLB-207ENST00000519771 UNC13AQ9UPW8 1703 aa13.97□□□□□ -0.17
POLB-207ENST00000519771 CC2D2AQ9P2K1 1620 aa13.97□□□□□ -0.17
POLB-207ENST00000519771 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.96□□□□□ -0.17
POLB-207ENST00000519771 DDX27Q96GQ7 796 aaKnown RBP13.95□□□□□ -0.18
POLB-207ENST00000519771 P3H3Q8IVL6 736 aa13.94□□□□□ -0.18
POLB-207ENST00000519771 GPHNQ9NQX3 736 aaPredicted RBP13.92□□□□□ -0.18
POLB-207ENST00000519771 MAMSTRQ6ZN01 415 aa13.91□□□□□ -0.18
POLB-207ENST00000519771 CRISPLD2Q9H0B8 497 aa13.91□□□□□ -0.18
POLB-207ENST00000519771 NCKAP5LQ9HCH0 1330 aa13.9□□□□□ -0.18
POLB-207ENST00000519771 SCUBE2Q9NQ36 999 aa13.89□□□□□ -0.19
POLB-207ENST00000519771 E2F4Q16254 413 aa13.87□□□□□ -0.19
POLB-207ENST00000519771 PPP1R15BQ5SWA1 713 aa13.86□□□□□ -0.19
POLB-207ENST00000519771 NBR1Q14596 966 aa13.85□□□□□ -0.19
POLB-207ENST00000519771 C2orf72A6NCS6 295 aa13.84□□□□□ -0.19
POLB-207ENST00000519771 MFSD10Q14728 455 aa13.84□□□□□ -0.19
POLB-207ENST00000519771 BCANQ96GW7 911 aa13.84□□□□□ -0.19
POLB-207ENST00000519771 FOXK1P85037 733 aa13.81□□□□□ -0.2
POLB-207ENST00000519771 DSG2Q14126 1118 aa13.8□□□□□ -0.2
POLB-207ENST00000519771 PLPP6Q8IY26 295 aa13.79□□□□□ -0.2
POLB-207ENST00000519771 MYO15BQ96JP2 1530 aa13.79□□□□□ -0.2
POLB-207ENST00000519771 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
POLB-207ENST00000519771 SHROOM4Q9ULL8 1493 aa13.78□□□□□ -0.2
POLB-207ENST00000519771 KIF3CO14782 793 aa13.75□□□□□ -0.21
POLB-207ENST00000519771 SLAIN1Q8ND83 568 aa13.75□□□□□ -0.21
POLB-207ENST00000519771 KCNV2Q8TDN2 545 aa13.74□□□□□ -0.21
POLB-207ENST00000519771 ARHGEF1Q92888 912 aaKnown RBP13.74□□□□□ -0.21
POLB-207ENST00000519771 TMEM92Q6UXU6 159 aa13.73□□□□□ -0.21
POLB-207ENST00000519771 POTEB2H3BUK9 544 aa13.72□□□□□ -0.21
POLB-207ENST00000519771 TBC1D12O60347 775 aa13.69□□□□□ -0.22
POLB-207ENST00000519771 LHX8Q68G74 356 aa13.69□□□□□ -0.22
POLB-207ENST00000519771 MAP3K9P80192 1104 aa13.68□□□□□ -0.22
POLB-207ENST00000519771 CAMK2BQ13554 666 aa13.68□□□□□ -0.22
POLB-207ENST00000519771 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
POLB-207ENST00000519771 POTEJP0CG39 1038 aa13.67□□□□□ -0.22
POLB-207ENST00000519771 ZNF316A6NFI3 1004 aaPredicted RBP13.65□□□□□ -0.22
POLB-207ENST00000519771 CUX2O14529 1486 aa13.65□□□□□ -0.22
POLB-207ENST00000519771 RIMBP2O15034 1052 aa13.64□□□□□ -0.23
POLB-207ENST00000519771 UPF1Q92900 1129 aaKnown RBP eCLIP13.64□□□□□ -0.23
POLB-207ENST00000519771 SNPHO15079 494 aa13.63□□□□□ -0.23
POLB-207ENST00000519771 DOK7Q18PE1 504 aa13.63□□□□□ -0.23
POLB-207ENST00000519771 DPYSL4O14531 572 aa13.6□□□□□ -0.23
POLB-207ENST00000519771 ZNF710Q8N1W2 664 aa13.6□□□□□ -0.23
POLB-207ENST00000519771 SPDYE16A6NNV3 312 aaPredicted RBP13.59□□□□□ -0.23
POLB-207ENST00000519771 EMILIN3Q9NT22 766 aa13.59□□□□□ -0.23
POLB-207ENST00000519771 ARIH1Q9Y4X5 557 aaPredicted RBP13.59□□□□□ -0.23
POLB-207ENST00000519771 SCRIBQ14160 1630 aa13.58□□□□□ -0.24
POLB-207ENST00000519771 ERCC6Q03468 1493 aa13.57□□□□□ -0.24
POLB-207ENST00000519771 SMYD5Q6GMV2 418 aa13.57□□□□□ -0.24
POLB-207ENST00000519771 SLC34A2O95436 690 aa13.56□□□□□ -0.24
POLB-207ENST00000519771 OXER1Q8TDS5 423 aa13.54□□□□□ -0.24
POLB-207ENST00000519771 PTCD2Q8WV60 388 aaKnown RBP13.54□□□□□ -0.24
POLB-207ENST00000519771 OTUD5Q96G74 571 aa13.53□□□□□ -0.24
POLB-207ENST00000519771 SEMA3EO15041 775 aa13.49□□□□□ -0.25
POLB-207ENST00000519771 EVI5O60447 810 aa13.49□□□□□ -0.25
POLB-207ENST00000519771 PDIA6Q15084 440 aa13.49□□□□□ -0.25
POLB-207ENST00000519771 ZSWIM6Q9HCJ5 1215 aa13.49□□□□□ -0.25
POLB-207ENST00000519771 PCDHGA4Q9Y5G9 962 aa13.49□□□□□ -0.25
POLB-207ENST00000519771 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
POLB-207ENST00000519771 HOXB3P14651 431 aaPredicted RBP13.42□□□□□ -0.26
POLB-207ENST00000519771 ARSIQ5FYB1 569 aa13.42□□□□□ -0.26
POLB-207ENST00000519771 GRXCR2A6NFK2 248 aa13.41□□□□□ -0.26
POLB-207ENST00000519771 DCAF1Q9Y4B6 1507 aa13.39□□□□□ -0.27
POLB-207ENST00000519771 NUDT7P0C024 238 aa13.37□□□□□ -0.27
POLB-207ENST00000519771 DDX12PQ92771 950 aa13.37□□□□□ -0.27
POLB-207ENST00000519771 PTGER2P43116 358 aa13.35□□□□□ -0.27
POLB-207ENST00000519771 ZCCHC6Q5VYS8 1495 aaKnown RBP13.35□□□□□ -0.27
POLB-207ENST00000519771 MLLT3P42568 568 aaPredicted RBP13.34□□□□□ -0.27
POLB-207ENST00000519771 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
POLB-207ENST00000519771 ANO8Q9HCE9 1232 aaPredicted RBP13.34□□□□□ -0.27
POLB-207ENST00000519771 GPR153Q6NV75 609 aa13.33□□□□□ -0.28
POLB-207ENST00000519771 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.32□□□□□ -0.28
POLB-207ENST00000519771 KHSRPQ92945 711 aaKnown RBP eCLIP13.32□□□□□ -0.28
POLB-207ENST00000519771 PSDA5PKW4 1024 aaPredicted RBP13.31□□□□□ -0.28
POLB-207ENST00000519771 HOXB1P14653 301 aaPredicted RBP13.31□□□□□ -0.28
POLB-207ENST00000519771 EPAS1Q99814 870 aa13.31□□□□□ -0.28
POLB-207ENST00000519771 FAM163AQ96GL9 167 aaPredicted RBP13.3□□□□□ -0.28
POLB-207ENST00000519771 PHF14O94880 888 aa13.29□□□□□ -0.28
POLB-207ENST00000519771 ZNF454Q8N9F8 522 aa13.28□□□□□ -0.28
POLB-207ENST00000519771 TYW1BQ6NUM6 668 aa13.27□□□□□ -0.29
POLB-207ENST00000519771 FBXW7Q969H0 707 aa13.27□□□□□ -0.29
POLB-207ENST00000519771 JPH4Q96JJ6 628 aa13.27□□□□□ -0.29
POLB-207ENST00000519771 TPRNQ4KMQ1 711 aa13.26□□□□□ -0.29
POLB-207ENST00000519771 NUTM2FA1L443 756 aa13.25□□□□□ -0.29
POLB-207ENST00000519771 PPP4R3BQ5MIZ7 849 aa13.25□□□□□ -0.29
POLB-207ENST00000519771 LHX6Q9UPM6 363 aa13.25□□□□□ -0.29
POLB-207ENST00000519771 RBM26Q5T8P6 1007 aaKnown RBP13.24□□□□□ -0.29
POLB-207ENST00000519771 GPIHBP1Q8IV16 184 aa13.24□□□□□ -0.29
POLB-207ENST00000519771 ERBB3P21860 1342 aa13.23□□□□□ -0.29
POLB-207ENST00000519771 MAP3K7O43318 606 aa13.23□□□□□ -0.29
POLB-207ENST00000519771 ST18O60284 1047 aa13.23□□□□□ -0.29
POLB-207ENST00000519771 EMP3P54852 163 aa13.23□□□□□ -0.29
POLB-207ENST00000519771 RBM33Q96EV2 1170 aaKnown RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms