RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
PCDHGB4-201ENST00000519479 CYB5RLQ6IPT4 315 aa15.14■□□□□ 0.01
PCDHGB4-201ENST00000519479 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
PCDHGB4-201ENST00000519479 MYOM3Q5VTT5 1437 aa15.14■□□□□ 0.01
PCDHGB4-201ENST00000519479 FYCO1Q9BQS8 1478 aa15.14■□□□□ 0.01
PCDHGB4-201ENST00000519479 TIAM1Q13009 1591 aa15.13■□□□□ 0.01
PCDHGB4-201ENST00000519479 ANKRD30AQ9BXX3 1397 aa15.11■□□□□ 0.01
PCDHGB4-201ENST00000519479 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
PCDHGB4-201ENST00000519479 NUP155O75694 1391 aa15.1■□□□□ 0.01
PCDHGB4-201ENST00000519479 NCOA2Q15596 1464 aa15.1■□□□□ 0.01
PCDHGB4-201ENST00000519479 CANXP27824 592 aaKnown RBP15.09■□□□□ 0.01
PCDHGB4-201ENST00000519479 ANP32AP39687 249 aaKnown RBP15.09■□□□□ 0.01
PCDHGB4-201ENST00000519479 UACAQ9BZF9 1416 aa15.08■□□□□ 0
PCDHGB4-201ENST00000519479 WDR43Q15061 677 aaKnown RBP eCLIP15.07■□□□□ 0
PCDHGB4-201ENST00000519479 HNRNPMP52272 730 aaKnown RBP eCLIP15.06■□□□□ 0
PCDHGB4-201ENST00000519479 ZNF644Q9H582 1327 aaPredicted RBP15.06■□□□□ 0
PCDHGB4-201ENST00000519479 NPM2Q86SE8 214 aaKnown RBP15.05■□□□□ 0
PCDHGB4-201ENST00000519479 KANK1Q14678 1352 aa15.04■□□□□ -0
PCDHGB4-201ENST00000519479 ARID4BQ4LE39 1312 aaPredicted RBP15.03■□□□□ -0
PCDHGB4-201ENST00000519479 HECW1Q76N89 1606 aa15.02■□□□□ -0
PCDHGB4-201ENST00000519479 EIF4G3O43432 1585 aaKnown RBP15.02■□□□□ -0
PCDHGB4-201ENST00000519479 ADAMTS12P58397 1594 aa15.02■□□□□ -0
PCDHGB4-201ENST00000519479 PPP4R2Q9NY27 417 aa15.02□□□□□ -0.01
PCDHGB4-201ENST00000519479 KNSTRNQ9Y448 316 aa15□□□□□ -0.01
PCDHGB4-201ENST00000519479 PCF11O94913 1555 aaKnown RBP14.99□□□□□ -0.01
PCDHGB4-201ENST00000519479 CC2D1BQ5T0F9 858 aaKnown RBP14.99□□□□□ -0.01
PCDHGB4-201ENST00000519479 SPAG9O60271 1321 aaKnown RBP14.98□□□□□ -0.01
PCDHGB4-201ENST00000519479 ABCA5Q8WWZ7 1642 aa14.97□□□□□ -0.01
PCDHGB4-201ENST00000519479 MAP3K1Q13233 1512 aa14.97□□□□□ -0.01
PCDHGB4-201ENST00000519479 CDCA8Q53HL2 280 aa14.97□□□□□ -0.01
PCDHGB4-201ENST00000519479 B4GALNT3Q6L9W6 998 aa14.97□□□□□ -0.01
PCDHGB4-201ENST00000519479 HFM1A2PYH4 1435 aa14.97□□□□□ -0.01
PCDHGB4-201ENST00000519479 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.95□□□□□ -0.02
PCDHGB4-201ENST00000519479 SENP3Q9H4L4 574 aaPredicted RBP14.95□□□□□ -0.02
PCDHGB4-201ENST00000519479 ROCK2O75116 1388 aaKnown RBP14.95□□□□□ -0.02
PCDHGB4-201ENST00000519479 EHBP1L1Q8N3D4 1523 aa14.95□□□□□ -0.02
PCDHGB4-201ENST00000519479 NEFMP07197 916 aa14.95□□□□□ -0.02
PCDHGB4-201ENST00000519479 TMF1P82094 1093 aa14.95□□□□□ -0.02
PCDHGB4-201ENST00000519479 TROQ12816 1431 aaPredicted RBP14.95□□□□□ -0.02
PCDHGB4-201ENST00000519479 TARBP1Q13395 1621 aaKnown RBP14.94□□□□□ -0.02
PCDHGB4-201ENST00000519479 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.93□□□□□ -0.02
PCDHGB4-201ENST00000519479 PRKRIP1Q9H875 184 aaPredicted RBP14.93□□□□□ -0.02
PCDHGB4-201ENST00000519479 TSHZ2Q9NRE2 1034 aa14.93□□□□□ -0.02
PCDHGB4-201ENST00000519479 PBRM1Q86U86 1689 aa14.92□□□□□ -0.02
PCDHGB4-201ENST00000519479 FAM69CQ0P6D2 419 aa14.92□□□□□ -0.02
PCDHGB4-201ENST00000519479 THOC2Q8NI27 1593 aaKnown RBP14.91□□□□□ -0.02
PCDHGB4-201ENST00000519479 NUP160Q12769 1436 aa14.9□□□□□ -0.02
PCDHGB4-201ENST00000519479 ANP32EQ9BTT0 268 aa14.9□□□□□ -0.02
PCDHGB4-201ENST00000519479 ST20-MTHFSA0A0A6YYL1 179 aa14.9□□□□□ -0.02
PCDHGB4-201ENST00000519479 EPRSP07814 1512 aaKnown RBP14.9□□□□□ -0.02
PCDHGB4-201ENST00000519479 NAIPQ13075 1403 aa14.89□□□□□ -0.03
PCDHGB4-201ENST00000519479 UGGT2Q9NYU1 1516 aa14.89□□□□□ -0.03
PCDHGB4-201ENST00000519479 RBM19Q9Y4C8 960 aaKnown RBP14.89□□□□□ -0.03
PCDHGB4-201ENST00000519479 WASHC2AQ641Q2 1341 aa14.89□□□□□ -0.03
PCDHGB4-201ENST00000519479 CTTNBP2Q8WZ74 1663 aa14.88□□□□□ -0.03
PCDHGB4-201ENST00000519479 PLEKHH2Q8IVE3 1493 aa14.88□□□□□ -0.03
PCDHGB4-201ENST00000519479 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
PCDHGB4-201ENST00000519479 MIA2Q96PC5 1412 aa14.88□□□□□ -0.03
PCDHGB4-201ENST00000519479 ZBTB47Q9UFB7 747 aaPredicted RBP14.88□□□□□ -0.03
PCDHGB4-201ENST00000519479 USP47Q96K76 1375 aa14.87□□□□□ -0.03
PCDHGB4-201ENST00000519479 KTN1Q86UP2 1357 aaKnown RBP14.87□□□□□ -0.03
PCDHGB4-201ENST00000519479 RALBP1Q15311 655 aa14.86□□□□□ -0.03
PCDHGB4-201ENST00000519479 CCDC7Q96M83 1385 aa14.85□□□□□ -0.03
PCDHGB4-201ENST00000519479 CDK13Q14004 1512 aaKnown RBP14.85□□□□□ -0.03
PCDHGB4-201ENST00000519479 EIF5BO60841 1220 aaKnown RBP14.85□□□□□ -0.03
PCDHGB4-201ENST00000519479 ERICH6BQ5W0A0 696 aa14.85□□□□□ -0.03
PCDHGB4-201ENST00000519479 BCL11AQ9H165 835 aa14.85□□□□□ -0.03
PCDHGB4-201ENST00000519479 SUPT6HQ7KZ85 1726 aaKnown RBP14.85□□□□□ -0.03
PCDHGB4-201ENST00000519479 GGT6Q6P531 493 aa14.84□□□□□ -0.03
PCDHGB4-201ENST00000519479 ANKRD50Q9ULJ7 1429 aa14.84□□□□□ -0.03
PCDHGB4-201ENST00000519479 KIF7Q2M1P5 1343 aa14.84□□□□□ -0.03
PCDHGB4-201ENST00000519479 NBR1Q14596 966 aa14.84□□□□□ -0.03
PCDHGB4-201ENST00000519479 CCDC144AA2RUR9 1427 aa14.83□□□□□ -0.03
PCDHGB4-201ENST00000519479 PLB1Q6P1J6 1458 aa14.83□□□□□ -0.04
PCDHGB4-201ENST00000519479 KIF3BO15066 747 aa14.83□□□□□ -0.04
PCDHGB4-201ENST00000519479 HDGFP51858 240 aaKnown RBP14.83□□□□□ -0.04
PCDHGB4-201ENST00000519479 ARHGAP5Q13017 1502 aa14.83□□□□□ -0.04
PCDHGB4-201ENST00000519479 KIF15Q9NS87 1388 aa14.82□□□□□ -0.04
PCDHGB4-201ENST00000519479 NBPF8Q3BBV2 869 aa14.81□□□□□ -0.04
PCDHGB4-201ENST00000519479 TNNT2P45379 298 aaPredicted RBP14.8□□□□□ -0.04
PCDHGB4-201ENST00000519479 NUDCQ9Y266 331 aa14.8□□□□□ -0.04
PCDHGB4-201ENST00000519479 CNTLNQ9NXG0 1405 aa14.79□□□□□ -0.04
PCDHGB4-201ENST00000519479 NEUROD2Q15784 382 aa14.79□□□□□ -0.04
PCDHGB4-201ENST00000519479 NLRP13Q86W25 1043 aa14.79□□□□□ -0.04
PCDHGB4-201ENST00000519479 DAPK1P53355 1430 aa14.79□□□□□ -0.04
PCDHGB4-201ENST00000519479 MLECQ14165 292 aa14.78□□□□□ -0.04
PCDHGB4-201ENST00000519479 KIAA0556O60303 1618 aa14.78□□□□□ -0.04
PCDHGB4-201ENST00000519479 ZBED9Q6R2W3 1325 aa14.78□□□□□ -0.04
PCDHGB4-201ENST00000519479 SLC24A1O60721 1099 aa14.78□□□□□ -0.04
PCDHGB4-201ENST00000519479 CFAP53Q96M91 514 aa14.77□□□□□ -0.04
PCDHGB4-201ENST00000519479 MAPKBP1O60336 1514 aa14.77□□□□□ -0.05
PCDHGB4-201ENST00000519479 PTPN23Q9H3S7 1636 aa14.76□□□□□ -0.05
PCDHGB4-201ENST00000519479 RCAN3Q9UKA8 241 aa14.76□□□□□ -0.05
PCDHGB4-201ENST00000519479 RAPGEF6Q8TEU7 1601 aa14.76□□□□□ -0.05
PCDHGB4-201ENST00000519479 MYBBP1AQ9BQG0 1328 aaKnown RBP14.75□□□□□ -0.05
PCDHGB4-201ENST00000519479 WASHC2CQ9Y4E1 1318 aa14.75□□□□□ -0.05
PCDHGB4-201ENST00000519479 KIF14Q15058 1648 aa14.74□□□□□ -0.05
PCDHGB4-201ENST00000519479 PTPRKQ15262 1439 aa14.74□□□□□ -0.05
PCDHGB4-201ENST00000519479 PANK3Q9H999 370 aa14.73□□□□□ -0.05
PCDHGB4-201ENST00000519479 UPF2Q9HAU5 1272 aaKnown RBP14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms